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(-) Description

Title :  L290F-A222T CHLAMYDOMONAS RUBISCO MUTANT
 
Authors :  S. Karkehabadi, T. C. Taylor, R. J. Spreitzer, I. Andersson
Date :  03 Feb 04  (Deposition) - 12 Jan 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A,B,C,E,F,H,I,J,K,M,O,P,R,T,V,W
Keywords :  Lyase, Rubisco, Photosynthesis, Photorespiration, Oxidoreductase, Monooxygenase, Carbon Dioxide Fixation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Karkehabadi, T. C. Taylor, R. J. Spreitzer, I. Andersson
Altered Intersubunit Interactions In Crystal Structures Of Catalytically Compromised Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase
Biochemistry V. 44 113 2005
PubMed-ID: 15628851  |  Reference-DOI: 10.1021/BI047928E

(-) Compounds

Molecule 1 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
    Chains: A, B, E, H, K, O, R, V
    EC Number: 4.1.1.39
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: RUBISCO LARGE SUBUNIT, RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAIN
 
Molecule 2 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1
    Chains: I, C, F, J, P, T, M, W
    EC Number: 4.1.1.39
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: RUBISCO SMALL SUBUNIT 1

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric/Biological Unit : ABCEFHIJKMOPRTVW

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 111)

Asymmetric/Biological Unit (6, 111)
No.NameCountTypeFull Name
1CAP8Ligand/Ion2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2EDO55Ligand/Ion1,2-ETHANEDIOL
3HYP16Mod. Amino Acid4-HYDROXYPROLINE
4KCX8Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5MG8Ligand/IonMAGNESIUM ION
6SMC16Mod. Amino AcidS-METHYLCYSTEINE

(-) Sites  (71, 71)

Asymmetric Unit (71, 71)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , CAP A:1477BINDING SITE FOR RESIDUE MG A1476
02AC2SOFTWARELYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , CAP B:1477BINDING SITE FOR RESIDUE MG B1476
03AC3SOFTWAREKCX E:201 , ASP E:203 , GLU E:204 , CAP E:1477BINDING SITE FOR RESIDUE MG E1476
04AC4SOFTWARELYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , CAP O:1478BINDING SITE FOR RESIDUE MG H1476
05AC5SOFTWARELYS K:177 , KCX K:201 , ASP K:203 , GLU K:204 , CAP R:1478BINDING SITE FOR RESIDUE MG K1476
06AC6SOFTWAREKCX O:201 , ASP O:203 , GLU O:204 , CAP O:1476BINDING SITE FOR RESIDUE MG O1477
07AC7SOFTWAREKCX R:201 , ASP R:203 , GLU R:204 , CAP R:1476BINDING SITE FOR RESIDUE MG R1477
08AC8SOFTWARELYS V:177 , KCX V:201 , ASP V:203 , GLU V:204 , CAP V:1476BINDING SITE FOR RESIDUE MG V1477
09AC9SOFTWARETHR A:173 , LYS A:175 , LYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , HIS A:294 , ARG A:295 , HIS A:327 , LYS A:334 , LEU A:335 , SER A:379 , GLY A:380 , GLY A:381 , GLY A:403 , GLY A:404 , MG A:1476 , HOH A:2162 , HOH A:2216 , HOH A:2217 , HOH A:2271 , HOH A:2272 , HOH A:2273 , HOH A:2274 , GLU B:60 , THR B:65 , TRP B:66 , ASN B:123BINDING SITE FOR RESIDUE CAP A1477
10BC1SOFTWARETYR A:24 , THR A:68 , VAL A:69 , ASP A:72 , EDO A:1479 , HOH A:2042 , HOH A:2275 , HOH A:2277BINDING SITE FOR RESIDUE EDO A1478
11BC2SOFTWARELYS A:18 , THR A:65 , TRP A:66 , THR A:67 , THR A:68 , EDO A:1478 , HOH A:2276 , HOH A:2277BINDING SITE FOR RESIDUE EDO A1479
12BC3SOFTWAREGLU A:52 , ALA A:129 , HOH B:2273BINDING SITE FOR RESIDUE EDO A1480
13BC4SOFTWARELYS A:466 , GLU A:468 , PHE A:469 , HOH A:2278BINDING SITE FOR RESIDUE EDO A1481
14BC5SOFTWAREPHE A:311 , GLU A:336 , ASP A:473 , HOH A:2164 , HOH A:2268 , HOH A:2279 , HOH A:2280BINDING SITE FOR RESIDUE EDO A1482
15BC6SOFTWARELEU A:270 , HOH A:2152 , HOH A:2281 , HOH A:2282 , HOH A:2283 , LEU B:270BINDING SITE FOR RESIDUE EDO A1483
16BC7SOFTWAREGLU A:60 , THR A:65 , TRP A:66 , ASN A:123 , HOH A:2081 , THR B:173 , LYS B:175 , LYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , HIS B:294 , ARG B:295 , HIS B:327 , LYS B:334 , LEU B:335 , SER B:379 , GLY B:380 , GLY B:381 , GLY B:403 , GLY B:404 , MG B:1476 , HOH B:2105 , HOH B:2263 , HOH B:2264 , HOH B:2265 , HOH B:2266 , HOH B:2267 , HOH B:2268BINDING SITE FOR RESIDUE CAP B1477
17BC8SOFTWARETYR B:24 , THR B:68 , VAL B:69 , ASP B:72 , LEU B:77 , HOH B:2269 , HOH B:2270 , HOH B:2271BINDING SITE FOR RESIDUE EDO B1478
18BC9SOFTWAREVAL B:17 , LYS B:18 , THR B:65 , TRP B:66 , THR B:67 , THR B:68 , HOH B:2018 , HOH B:2271BINDING SITE FOR RESIDUE EDO B1479
19CC1SOFTWAREHOH A:2278 , GLU B:52BINDING SITE FOR RESIDUE EDO B1480
20CC2SOFTWARELYS B:466 , GLU B:468 , PHE B:469 , HOH B:2273BINDING SITE FOR RESIDUE EDO B1481
21CC3SOFTWAREHIS B:298 , PHE B:311 , GLU B:336 , ASP B:473 , HOH B:2195 , HOH B:2274 , HOH B:2275 , HOH B:2276BINDING SITE FOR RESIDUE EDO B1482
22CC4SOFTWARELYS C:49 , GLU C:55 , TYR V:226 , LYS V:227BINDING SITE FOR RESIDUE EDO C1141
23CC5SOFTWAREGLY C:37 , TRP C:38 , ILE C:39 , PHE C:81 , GLY C:82 , CYS C:83 , HOH C:2080BINDING SITE FOR RESIDUE EDO C1142
24CC6SOFTWARETHR E:173 , LYS E:175 , LYS E:177 , KCX E:201 , ASP E:203 , GLU E:204 , HIS E:294 , ARG E:295 , HIS E:327 , LYS E:334 , LEU E:335 , SER E:379 , GLY E:380 , GLY E:381 , GLY E:403 , GLY E:404 , MG E:1476 , HOH E:2165 , HOH E:2219 , HOH E:2275 , HOH E:2276 , HOH E:2277 , HOH E:2278 , GLU K:60 , THR K:65 , TRP K:66 , ASN K:123 , HOH K:2028 , HOH K:2063BINDING SITE FOR RESIDUE CAP E1477
25CC7SOFTWARETYR E:24 , GLY E:64 , THR E:68 , VAL E:69 , ASP E:72 , HOH E:2039 , HOH E:2045 , HOH E:2279BINDING SITE FOR RESIDUE EDO E1478
26CC8SOFTWAREVAL E:17 , LYS E:18 , TYR E:20 , THR E:65 , TRP E:66 , THR E:67 , THR E:68 , HOH E:2279 , HOH E:2280BINDING SITE FOR RESIDUE EDO E1479
27CC9SOFTWAREGLU E:52 , HOH K:2250BINDING SITE FOR RESIDUE EDO E1480
28DC1SOFTWARELYS E:466 , PHE E:467 , GLU E:468 , PHE E:469 , HOH E:2281BINDING SITE FOR RESIDUE EDO E1481
29DC2SOFTWARELEU E:270 , HOH E:2282 , HOH E:2283 , HOH E:2284 , HOH E:2285 , LEU K:270BINDING SITE FOR RESIDUE EDO E1482
30DC3SOFTWARELEU H:270 , HOH H:2263 , HOH H:2264 , LEU R:270BINDING SITE FOR RESIDUE EDO H1477
31DC4SOFTWARETYR H:24 , THR H:68 , VAL H:69 , ASP H:72 , EDO H:1479 , HOH H:2265 , HOH H:2266 , HOH H:2267BINDING SITE FOR RESIDUE EDO H1478
32DC5SOFTWARELYS H:18 , THR H:65 , TRP H:66 , THR H:67 , THR H:68 , EDO H:1478 , HOH H:2019 , HOH H:2267BINDING SITE FOR RESIDUE EDO H1479
33DC6SOFTWAREGLU H:52 , HOH R:2260BINDING SITE FOR RESIDUE EDO H1480
34DC7SOFTWARELYS H:466 , GLU H:468 , PHE H:469 , HOH H:2268 , HOH H:2269BINDING SITE FOR RESIDUE EDO H1481
35DC8SOFTWAREHIS H:298 , PHE H:311 , GLU H:336 , ASP H:473 , HOH H:2173 , HOH H:2190 , HOH H:2270 , HOH H:2271BINDING SITE FOR RESIDUE EDO H1482
36DC9SOFTWARELYS I:49 , GLU I:55 , ASP I:69 , HOH I:2034 , TYR K:226 , LYS K:227BINDING SITE FOR RESIDUE EDO I1141
37EC1SOFTWARETYR E:226 , LYS E:227 , HOH E:2134 , LYS J:49 , GLU J:55 , HOH J:2038 , HOH J:2040BINDING SITE FOR RESIDUE EDO J1141
38EC2SOFTWAREGLY J:37 , TRP J:38 , ILE J:39 , PHE J:81 , GLY J:82 , CYS J:83 , HOH J:2074BINDING SITE FOR RESIDUE EDO J1142
39EC3SOFTWARETYR K:24 , GLY K:64 , THR K:68 , VAL K:69 , ASP K:72 , LEU K:77 , HOH K:2036 , HOH K:2248 , HOH K:2249BINDING SITE FOR RESIDUE EDO K1477
40EC4SOFTWAREVAL K:17 , LYS K:18 , TRP K:66 , THR K:67 , THR K:68 , HOH K:2007 , HOH K:2249BINDING SITE FOR RESIDUE EDO K1478
41EC5SOFTWAREHOH E:2281 , GLU K:52BINDING SITE FOR RESIDUE EDO K1479
42EC6SOFTWARELYS K:466 , GLU K:468 , PHE K:469 , HOH K:2250 , HOH K:2251BINDING SITE FOR RESIDUE EDO K1480
43EC7SOFTWAREHIS K:298 , PHE K:311 , GLU K:336 , ASP K:473 , HOH K:2161 , HOH K:2180 , HOH K:2252 , HOH K:2253BINDING SITE FOR RESIDUE EDO K1481
44EC8SOFTWARELYS M:49 , GLU M:55 , HOH M:2045 , HOH M:2047 , TYR O:226 , HOH O:2132BINDING SITE FOR RESIDUE EDO M1141
45EC9SOFTWAREGLY M:37 , ILE M:39 , GLY M:82BINDING SITE FOR RESIDUE EDO M1142
46FC1SOFTWARETHR O:173 , LYS O:175 , LYS O:177 , KCX O:201 , ASP O:203 , GLU O:204 , HIS O:294 , ARG O:295 , HIS O:327 , LYS O:334 , LEU O:335 , SER O:379 , GLY O:380 , GLY O:381 , GLY O:403 , GLY O:404 , MG O:1477 , HOH O:2261 , HOH O:2262 , HOH O:2263 , HOH O:2264 , HOH O:2265 , HOH O:2266 , GLU V:60 , THR V:65 , TRP V:66 , ASN V:123 , HOH V:2080BINDING SITE FOR RESIDUE CAP O1476
47FC2SOFTWARETHR H:173 , LYS H:175 , LYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , HIS H:294 , ARG H:295 , HIS H:327 , LYS H:334 , LEU H:335 , SER H:379 , GLY H:380 , GLY H:381 , GLY H:403 , GLY H:404 , MG H:1476 , HOH H:2215 , HOH H:2216 , HOH O:2267 , HOH O:2268 , HOH O:2269 , HOH O:2270 , GLU R:60 , THR R:65 , TRP R:66 , ASN R:123 , HOH R:2037 , HOH R:2075BINDING SITE FOR RESIDUE CAP O1478
48FC3SOFTWARETYR O:24 , GLY O:64 , THR O:68 , VAL O:69 , ASP O:72 , LEU O:77 , HOH O:2039 , HOH O:2271 , HOH O:2272BINDING SITE FOR RESIDUE EDO O1479
49FC4SOFTWARELYS O:18 , THR O:65 , TRP O:66 , THR O:67 , THR O:68 , HOH O:2272 , HOH O:2273BINDING SITE FOR RESIDUE EDO O1480
50FC5SOFTWAREGLU O:52 , HOH O:2007 , HOH V:2286BINDING SITE FOR RESIDUE EDO O1481
51FC6SOFTWARELYS O:466 , GLU O:468 , PHE O:469 , HOH O:2274 , HOH O:2275BINDING SITE FOR RESIDUE EDO O1482
52FC7SOFTWAREARG O:295 , HIS O:298 , PHE O:311 , GLU O:336 , ASP O:473 , HOH O:2276 , HOH O:2277 , HOH O:2278BINDING SITE FOR RESIDUE EDO O1483
53FC8SOFTWARELEU O:270 , HOH O:2279 , HOH O:2280 , HOH O:2281 , LEU V:270BINDING SITE FOR RESIDUE EDO O1484
54FC9SOFTWARELYS P:49 , GLU P:55 , HOH P:2024 , HOH P:2029 , TYR R:226BINDING SITE FOR RESIDUE EDO P1141
55GC1SOFTWARETRP P:38 , ILE P:39 , GLY P:82 , CYS P:83 , HOH P:2059 , HOH P:2060BINDING SITE FOR RESIDUE EDO P1142
56GC2SOFTWAREGLU H:60 , THR H:65 , TRP H:66 , ASN H:123 , THR R:173 , LYS R:175 , LYS R:177 , KCX R:201 , ASP R:203 , GLU R:204 , HIS R:294 , ARG R:295 , HIS R:327 , LYS R:334 , LEU R:335 , SER R:379 , GLY R:380 , GLY R:381 , GLY R:403 , GLY R:404 , MG R:1477 , HOH R:2106 , HOH R:2246 , HOH R:2247 , HOH R:2248 , HOH R:2249 , HOH R:2250 , HOH R:2251 , HOH R:2252BINDING SITE FOR RESIDUE CAP R1476
57GC3SOFTWAREGLU E:60 , THR E:65 , TRP E:66 , ASN E:123 , HOH E:2080 , THR K:173 , LYS K:175 , LYS K:177 , KCX K:201 , ASP K:203 , GLU K:204 , HIS K:294 , ARG K:295 , HIS K:327 , LYS K:334 , LEU K:335 , SER K:379 , GLY K:380 , GLY K:381 , GLY K:403 , GLY K:404 , MG K:1476 , HOH K:2094 , HOH K:2203 , HOH R:2253 , HOH R:2254 , HOH R:2255 , HOH R:2256 , HOH R:2257BINDING SITE FOR RESIDUE CAP R1478
58GC4SOFTWARETYR R:24 , GLY R:64 , THR R:68 , VAL R:69 , ASP R:72 , LEU R:77 , HOH R:2040 , HOH R:2258 , HOH R:2259BINDING SITE FOR RESIDUE EDO R1479
59GC5SOFTWAREGLY R:16 , VAL R:17 , LYS R:18 , THR R:65 , TRP R:66 , THR R:67 , THR R:68 , HOH R:2011 , HOH R:2259BINDING SITE FOR RESIDUE EDO R1480
60GC6SOFTWAREHOH H:2268 , GLU R:52BINDING SITE FOR RESIDUE EDO R1481
61GC7SOFTWARELYS R:466 , GLU R:468 , PHE R:469 , HOH R:2260 , HOH R:2261BINDING SITE FOR RESIDUE EDO R1482
62GC8SOFTWARETYR A:226 , LYS A:227 , HOH A:2126 , LYS T:49 , GLU T:55 , HOH T:2045BINDING SITE FOR RESIDUE EDO T1141
63GC9SOFTWAREGLY T:37 , ILE T:39 , PHE T:81 , GLY T:82 , CYS T:83BINDING SITE FOR RESIDUE EDO T1142
64HC1SOFTWAREGLU O:60 , THR O:65 , TRP O:66 , ASN O:123 , HOH O:2033 , HOH O:2080 , THR V:173 , LYS V:175 , LYS V:177 , KCX V:201 , ASP V:203 , GLU V:204 , HIS V:294 , ARG V:295 , HIS V:327 , LYS V:334 , LEU V:335 , SER V:379 , GLY V:380 , GLY V:381 , GLY V:403 , GLY V:404 , MG V:1477 , HOH V:2277 , HOH V:2278 , HOH V:2279 , HOH V:2280 , HOH V:2281 , HOH V:2282BINDING SITE FOR RESIDUE CAP V1476
65HC2SOFTWARETYR V:24 , GLY V:64 , THR V:68 , VAL V:69 , ASP V:72 , EDO V:1479 , HOH V:2283 , HOH V:2284 , HOH V:2285BINDING SITE FOR RESIDUE EDO V1478
66HC3SOFTWAREVAL V:17 , LYS V:18 , THR V:65 , THR V:67 , THR V:68 , EDO V:1478 , HOH V:2011 , HOH V:2285BINDING SITE FOR RESIDUE EDO V1479
67HC4SOFTWAREHOH O:2275 , GLU V:52 , ALA V:129BINDING SITE FOR RESIDUE EDO V1480
68HC5SOFTWARELYS V:466 , GLU V:468 , PHE V:469 , HOH V:2286 , HOH V:2287BINDING SITE FOR RESIDUE EDO V1481
69HC6SOFTWAREHIS V:298 , PHE V:311 , GLU V:336 , ASP V:473 , HOH V:2193 , HOH V:2288 , HOH V:2289BINDING SITE FOR RESIDUE EDO V1482
70HC7SOFTWARETYR H:226 , LYS H:227 , ALA H:230 , HOH H:2134 , LYS W:49 , GLU W:55 , HOH W:2049BINDING SITE FOR RESIDUE EDO W1141
71HC8SOFTWAREGLY W:37 , ILE W:39 , GLY W:82 , CYS W:83BINDING SITE FOR RESIDUE EDO W1142

(-) SS Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1E:247 -K:247
2E:247 -K:247
3H:247 -R:247
4H:247 -R:247
5O:247 -V:247
6O:247 -V:247

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Lys A:175 -Pro A:176
2Lys B:175 -Pro B:176
3Lys E:175 -Pro E:176
4Lys H:175 -Pro H:176
5Lys K:175 -Pro K:176
6Lys O:175 -Pro O:176
7Lys R:175 -Pro R:176
8Lys V:175 -Pro V:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 8)

Asymmetric/Biological Unit (1, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RBL_CHLRE_001 *L46PRBL_CHLRE  ---  ---A/B/E/H/K/O/R/VP46P
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 8)

Asymmetric/Biological Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_CHLRE196-204
 
 
 
 
 
 
 		  8A:196-204
B:196-204
E:196-204
H:196-204
K:196-204
O:196-204
R:196-204
V:196-204

(-) Exons   (0, 0)

(no "Exon" information available for 1UW9)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:465
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:465
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9a2 A:11-149 automated matches                                                                                                         d1uw9a1 A:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -----------1uw9A01 A:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9A02 A:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -----------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 A  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:467
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:467
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9b2 B:9-149 automated matches                                                                                                            d1uw9b1 B:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -------------1uw9B01 B:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9B02 B:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 B   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468       
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9c_ C: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9C00 C:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 C   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain E from PDB  Type:PROTEIN  Length:465
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:465
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9e2 E:11-149 automated matches                                                                                                         d1uw9e1 E:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -----------1uw9E01 E:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9E02 E:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -----------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 E  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain F from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9f_ F: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9F00 F:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 F   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain H from PDB  Type:PROTEIN  Length:469
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:469
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         
            RBL_CHLRE     7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9h2 H:7-149 automated matches                                                                                                              d1uw9h1 H:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ---------------1uw9H01 H:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9H02 H:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 H   7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146    |  156       166       176       186       196    |  206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  |    376       386       396       406       416       426       436       446       456       466         
                                                                                                                           104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain I from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9i_ I: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9I00 I:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 I   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain J from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9j_ J: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9J00 J:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 J   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain K from PDB  Type:PROTEIN  Length:469
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:469
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         
            RBL_CHLRE     7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9k2 K:7-149 automated matches                                                                                                              d1uw9k1 K:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ---------------1uw9K01 K:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9K02 K:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 K   7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146    |  156       166       176       186       196    |  206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  |    376       386       396       406       416       426       436       446       456       466         
                                                                                                                           104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain M from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9m_ M: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9M00 M:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 M   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain O from PDB  Type:PROTEIN  Length:469
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:469
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466         
            RBL_CHLRE     7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9o2 O:7-149 automated matches                                                                                                              d1uw9o1 O:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ---------------1uw9O01 O:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9O02 O:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 O   7 TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146    |  156       166       176       186       196    |  206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  |    376       386       396       406       416       426       436       446       456       466         
                                                                                                                           104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain P from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9p_ P: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9P00 P:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 P   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain R from PDB  Type:PROTEIN  Length:465
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:465
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9r2 R:11-149 automated matches                                                                                                         d1uw9r1 R:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -----------1uw9R01 R:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9R02 R:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -----------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 R  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain T from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9t_ T: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9T00 T:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 T   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140


Chain V from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
            RBL_CHLRE    10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d1uw9v2 V:10-149 automated matches                                                                                                          d1uw9v1 V:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------1uw9V01 V:22-148  [code=3.30.70.150, no name defined]                                                                          1uw9V02 V:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
           Pfam domains (1) -----------RuBisCO_large_N-1uw9V09 V:21-146                                                                                              -------RuBisCO_large-1uw9V01 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (1)
           Pfam domains (2) -----------RuBisCO_large_N-1uw9V10 V:21-146                                                                                              -------RuBisCO_large-1uw9V02 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (2)
           Pfam domains (3) -----------RuBisCO_large_N-1uw9V11 V:21-146                                                                                              -------RuBisCO_large-1uw9V03 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (3)
           Pfam domains (4) -----------RuBisCO_large_N-1uw9V12 V:21-146                                                                                              -------RuBisCO_large-1uw9V04 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (4)
           Pfam domains (5) -----------RuBisCO_large_N-1uw9V13 V:21-146                                                                                              -------RuBisCO_large-1uw9V05 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (5)
           Pfam domains (6) -----------RuBisCO_large_N-1uw9V14 V:21-146                                                                                              -------RuBisCO_large-1uw9V06 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (6)
           Pfam domains (7) -----------RuBisCO_large_N-1uw9V15 V:21-146                                                                                              -------RuBisCO_large-1uw9V07 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (7)
           Pfam domains (8) -----------RuBisCO_large_N-1uw9V16 V:21-146                                                                                              -------RuBisCO_large-1uw9V08 V:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (8)
         Sec.struct. author ..........hhhhhh..........eeeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeeeehhhhh...hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhhhh...ee.ee....hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh.ee...hhhh....ee.......eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 V  10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVTEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLFLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    19        29        39        49        59        69        79        89        99    |  109       119       129       139       149 |     159       169       179       189       199 |     209       219       229       239       249      |259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
                                                                                                                        104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain W from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d1uw9w_ W: automated matches                                                                                                                 SCOP domains
               CATH domains 1uw9W00 W:1-140  [code=3.30.190.10, no name defined]                                                                                         CATH domains
           Pfam domains (1) ----------RuBisCO_small-1uw9W01 W:11-127                                                                                       ------------- Pfam domains (1)
           Pfam domains (2) ----------RuBisCO_small-1uw9W02 W:11-127                                                                                       ------------- Pfam domains (2)
           Pfam domains (3) ----------RuBisCO_small-1uw9W03 W:11-127                                                                                       ------------- Pfam domains (3)
           Pfam domains (4) ----------RuBisCO_small-1uw9W04 W:11-127                                                                                       ------------- Pfam domains (4)
           Pfam domains (5) ----------RuBisCO_small-1uw9W05 W:11-127                                                                                       ------------- Pfam domains (5)
           Pfam domains (6) ----------RuBisCO_small-1uw9W06 W:11-127                                                                                       ------------- Pfam domains (6)
           Pfam domains (7) ----------RuBisCO_small-1uw9W07 W:11-127                                                                                       ------------- Pfam domains (7)
           Pfam domains (8) ----------RuBisCO_small-1uw9W08 W:11-127                                                                                       ------------- Pfam domains (8)
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1uw9 W   1 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARDWQPANKRSV 140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: RuBisCO_large] (36)
(-)
Clan: no clan defined [family: RuBisCO_large_N] (27)
(-)
Clan: no clan defined [family: RuBisCO_small] (23)

(-) Gene Ontology  (13, 23)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,E,H,K,O,R,V   (RBL_CHLRE | P00877)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Chain C,F,I,J,M,P,T,W   (RBS1_CHLRE | P00873)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBL_CHLRE | P00877: 1gk8 1ir2 1uwa 1uzd 1uzh 2v63 2v67 2v68 2v69 2v6a 2vdh 2vdi 5bs2
        RBS1_CHLRE | P00873: 1gk8 1uwa 1uzd 1uzh 2v63 2v67 2v68 2v69 2v6a 2vdh 2vdi

(-) Related Entries Specified in the PDB File

1gk8 RUBISCO FROM CHLAMYDOMONAS REINHARDTII
1ir2 CRYSTAL STRUCTURE OF ACTIVATED RIBULOSE-1,5 -BISPHOSPHATECARBOXYLASE/OXYGENASE (RUBISCO) FROM GREEN ALGA,CHLAMYDOMONAS REINHARDTII COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-BISPHOSPHATE ( 2-CABP)
1uwa L290F MUTANT RUBISCO FROM CHLAMYDOMONAS