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(-) Description

Title :  CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH LARGE-SUBUNIT MUTATIONS V331A, T342I
 
Authors :  S. Karkehabadi, S. Satagopan, T. C. Taylor, R. J. Spreitzer, I. Andersson
Date :  13 Jul 07  (Deposition) - 07 Aug 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Keywords :  Large Subunit Loop 6 Mutation, Co2/O2 Specificity, Carbon Dioxide Fixation, Photosynthesis, Transit Peptide, Photorespiration, Metal-Binding, Hydroxylation, Oxidoreductase, Methylation, Chloroplast, Calvin Cycle, Monooxygenase, Lyase, Rubisco, Plastid, Magnesium, Acetylation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Karkehabadi, S. Satagopan, T. C. Taylor, R. J. Spreitzer, I. Andersson
Structural Analysis Of Altered Large-Subunit Loop- 6-Carboxy-Terminus Interactions That Influence Catalytic Efficiency And Co2 O2 Specificity Of Ribulose-1, 5-Bisphosphate Carboxylase Oxygenase
Biochemistry V. 46 11080 2007
PubMed-ID: 17824672  |  Reference-DOI: 10.1021/BI701063F

(-) Compounds

Molecule 1 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN
    Chains: A, B, C, D, E, F, G, H
    EC Number: 4.1.1.39
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Strain: 2137
    Synonym: RUBISCO LARGE SUBUNIT, RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE LARGE CHAIN
 
Molecule 2 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1
    Chains: I, J, K, L, M, N, O, P
    EC Number: 4.1.1.39
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 46-185
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Strain: 2137
    Synonym: RUBISCO SMALL SUBUNIT 1,RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE SMALL CHAIN

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 113)

Asymmetric/Biological Unit (7, 113)
No.NameCountTypeFull Name
1CAP8Ligand/Ion2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2EDO49Ligand/Ion1,2-ETHANEDIOL
3HYP16Mod. Amino Acid4-HYDROXYPROLINE
4KCX8Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5MG8Ligand/IonMAGNESIUM ION
6MME8Mod. Amino AcidN-METHYL METHIONINE
7SMC16Mod. Amino AcidS-METHYLCYSTEINE

(-) Sites  (64, 64)

Asymmetric Unit (64, 64)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:173 , LYS A:175 , LYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , HIS A:294 , ARG A:295 , HIS A:327 , LYS A:334 , LEU A:335 , SER A:379 , GLY A:380 , GLY A:381 , GLY A:403 , GLY A:404 , MG A:476 , HOH A:2157 , HOH A:2192 , HOH A:2204 , HOH A:2231 , HOH A:2232 , HOH A:2233 , HOH A:2234 , GLU B:60 , THR B:65 , TRP B:66 , ASN B:123BINDING SITE FOR RESIDUE CAP A 477
02AC2SOFTWARELYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , CAP A:477BINDING SITE FOR RESIDUE MG A 476
03AC3SOFTWAREGLU A:60 , THR A:65 , TRP A:66 , ASN A:123 , HOH A:2028 , THR B:173 , LYS B:175 , LYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , HIS B:294 , ARG B:295 , HIS B:327 , LYS B:334 , LEU B:335 , SER B:379 , GLY B:380 , GLY B:381 , GLY B:403 , GLY B:404 , MG B:476 , HOH B:2086 , HOH B:2088 , HOH B:2133 , HOH B:2208 , HOH B:2209 , HOH B:2210 , HOH B:2211 , HOH B:2212BINDING SITE FOR RESIDUE CAP B 477
04AC4SOFTWAREKCX B:201 , ASP B:203 , GLU B:204 , CAP B:477BINDING SITE FOR RESIDUE MG B 476
05AC5SOFTWARETHR C:173 , LYS C:175 , LYS C:177 , KCX C:201 , ASP C:203 , GLU C:204 , HIS C:294 , ARG C:295 , HIS C:327 , LYS C:334 , LEU C:335 , SER C:379 , GLY C:380 , GLY C:381 , GLY C:403 , GLY C:404 , MG C:476 , HOH C:2099 , HOH C:2100 , HOH C:2154 , HOH C:2225 , HOH C:2226 , HOH C:2227 , HOH C:2228 , GLU D:60 , THR D:65 , TRP D:66 , ASN D:123 , HOH D:2066BINDING SITE FOR RESIDUE CAP C 477
06AC6SOFTWAREKCX C:201 , ASP C:203 , GLU C:204 , CAP C:477BINDING SITE FOR RESIDUE MG C 476
07AC7SOFTWAREGLU C:60 , THR C:65 , TRP C:66 , ASN C:123 , THR D:173 , LYS D:175 , LYS D:177 , KCX D:201 , ASP D:203 , GLU D:204 , HIS D:294 , ARG D:295 , HIS D:327 , LYS D:334 , LEU D:335 , SER D:379 , GLY D:380 , GLY D:381 , GLY D:403 , GLY D:404 , MG D:476 , HOH D:2142 , HOH D:2172 , HOH D:2181 , HOH D:2205 , HOH D:2206 , HOH D:2207 , HOH D:2208BINDING SITE FOR RESIDUE CAP D 477
08AC8SOFTWAREKCX D:201 , ASP D:203 , GLU D:204 , CAP D:477BINDING SITE FOR RESIDUE MG D 476
09AC9SOFTWARETHR E:173 , LYS E:175 , LYS E:177 , KCX E:201 , ASP E:203 , GLU E:204 , HIS E:294 , ARG E:295 , HIS E:327 , LYS E:334 , LEU E:335 , SER E:379 , GLY E:380 , GLY E:381 , GLY E:403 , GLY E:404 , MG E:476 , HOH E:2146 , HOH E:2179 , HOH E:2220 , HOH E:2221 , HOH E:2222 , HOH E:2223 , HOH E:2224 , GLU F:60 , THR F:65 , TRP F:66 , ASN F:123BINDING SITE FOR RESIDUE CAP E 477
10BC1SOFTWAREKCX E:201 , ASP E:203 , GLU E:204 , CAP E:477BINDING SITE FOR RESIDUE MG E 476
11BC2SOFTWAREGLU E:60 , THR E:65 , TRP E:66 , ASN E:123 , HOH E:2063 , THR F:173 , LYS F:175 , LYS F:177 , KCX F:201 , ASP F:203 , GLU F:204 , HIS F:294 , ARG F:295 , HIS F:327 , LYS F:334 , LEU F:335 , SER F:379 , GLY F:380 , GLY F:381 , GLY F:403 , GLY F:404 , MG F:476 , HOH F:2088 , HOH F:2205 , HOH F:2206 , HOH F:2207 , HOH F:2208 , HOH F:2209 , HOH F:2210BINDING SITE FOR RESIDUE CAP F 477
12BC3SOFTWARELYS F:177 , KCX F:201 , ASP F:203 , GLU F:204 , CAP F:477BINDING SITE FOR RESIDUE MG F 476
13BC4SOFTWARETHR G:173 , LYS G:175 , LYS G:177 , KCX G:201 , ASP G:203 , GLU G:204 , HIS G:294 , ARG G:295 , HIS G:327 , LYS G:334 , LEU G:335 , SER G:379 , GLY G:380 , GLY G:381 , GLY G:403 , GLY G:404 , MG G:476 , HOH G:2085 , HOH G:2142 , HOH G:2181 , HOH G:2217 , HOH G:2218 , HOH G:2219 , GLU H:60 , THR H:65 , TRP H:66 , ASN H:123 , HOH H:2025 , HOH H:2027 , HOH H:2067BINDING SITE FOR RESIDUE CAP G 477
14BC5SOFTWAREKCX G:201 , ASP G:203 , GLU G:204 , CAP G:477BINDING SITE FOR RESIDUE MG G 476
15BC6SOFTWAREGLU G:60 , THR G:65 , TRP G:66 , ASN G:123 , HOH G:2058 , THR H:173 , LYS H:175 , LYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , HIS H:294 , ARG H:295 , HIS H:327 , LYS H:334 , LEU H:335 , SER H:379 , GLY H:380 , GLY H:381 , GLY H:403 , GLY H:404 , MG H:476 , HOH H:2183 , HOH H:2195 , HOH H:2227 , HOH H:2228 , HOH H:2229 , HOH H:2230BINDING SITE FOR RESIDUE CAP H 477
16BC7SOFTWARELYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , CAP H:477BINDING SITE FOR RESIDUE MG H 476
17BC8SOFTWARELYS A:466 , PHE A:467 , GLU A:468 , PHE A:469 , HOH A:2237 , HOH B:2213BINDING SITE FOR RESIDUE EDO A1477
18BC9SOFTWAREARG A:295 , SER A:328 , GLY A:329 , GLU A:336 , GLY A:337 , PHE A:345BINDING SITE FOR RESIDUE EDO A1484
19CC1SOFTWARELYS A:18 , THR A:65 , TRP A:66 , THR A:67 , THR A:68 , EDO A:1481 , HOH A:2011 , HOH A:2235BINDING SITE FOR RESIDUE EDO A1483
20CC2SOFTWARETYR A:24 , THR A:68 , VAL A:69 , ASP A:72 , EDO A:1483 , HOH A:2035 , HOH A:2235 , HOH A:2236BINDING SITE FOR RESIDUE EDO A1481
21CC3SOFTWARETYR A:20 , GLU A:52 , HOH B:2216BINDING SITE FOR RESIDUE EDO A1482
22CC4SOFTWARETYR B:24 , THR B:68 , VAL B:69 , ASP B:72 , HOH B:2027 , HOH B:2032 , HOH B:2214BINDING SITE FOR RESIDUE EDO B1477
23CC5SOFTWARELYS B:466 , PHE B:467 , GLU B:468 , PHE B:469 , HOH B:2216BINDING SITE FOR RESIDUE EDO B1479
24CC6SOFTWARETYR B:20 , GLU B:52 , HOH B:2213BINDING SITE FOR RESIDUE EDO B1480
25CC7SOFTWARELYS B:18 , THR B:65 , TRP B:66 , THR B:67 , THR B:68 , HOH B:2214 , HOH B:2215BINDING SITE FOR RESIDUE EDO B1481
26CC8SOFTWAREGLU C:52BINDING SITE FOR RESIDUE EDO C1477
27CC9SOFTWARELYS C:18 , THR C:65 , TRP C:66 , THR C:67 , THR C:68 , HOH C:2030 , HOH C:2230BINDING SITE FOR RESIDUE EDO C1478
28DC1SOFTWARETYR C:24 , GLY C:64 , THR C:68 , VAL C:69 , ASP C:72 , HOH C:2030 , HOH C:2231 , HOH C:2232BINDING SITE FOR RESIDUE EDO C1480
29DC2SOFTWARELYS C:466 , PHE C:467 , GLU C:468 , PHE C:469 , HOH C:2229BINDING SITE FOR RESIDUE EDO C1481
30DC3SOFTWAREGLU C:336 , GLY C:337 , ASP C:473 , HOH C:2165 , HOH C:2233BINDING SITE FOR RESIDUE EDO C1482
31DC4SOFTWARETYR D:24 , THR D:68 , VAL D:69 , ASP D:72 , EDO D:1480 , HOH D:2031 , HOH D:2211BINDING SITE FOR RESIDUE EDO D1477
32DC5SOFTWARELYS D:466 , PHE D:467 , GLU D:468 , PHE D:469 , HOH D:2209BINDING SITE FOR RESIDUE EDO D1478
33DC6SOFTWAREGLY D:16 , LYS D:18 , THR D:65 , TRP D:66 , THR D:67 , THR D:68 , EDO D:1477 , HOH D:2210 , HOH D:2211BINDING SITE FOR RESIDUE EDO D1480
34DC7SOFTWAREHOH C:2229 , GLU D:52BINDING SITE FOR RESIDUE EDO D1481
35DC8SOFTWARETYR E:24 , THR E:68 , VAL E:69 , ASP E:72 , LEU E:77 , HOH E:2031 , HOH E:2035 , HOH E:2225BINDING SITE FOR RESIDUE EDO E1476
36DC9SOFTWARELYS E:18 , THR E:65 , TRP E:66 , THR E:67 , THR E:68 , HOH E:2009 , HOH E:2225BINDING SITE FOR RESIDUE EDO E1478
37EC1SOFTWAREGLU E:52BINDING SITE FOR RESIDUE EDO E1480
38EC2SOFTWARETYR F:24 , THR F:68 , VAL F:69 , ASP F:72 , LEU F:77 , HOH F:2027 , HOH F:2029 , HOH F:2033BINDING SITE FOR RESIDUE EDO F1484
39EC3SOFTWARETYR F:20 , GLU F:52BINDING SITE FOR RESIDUE EDO F1480
40EC4SOFTWAREARG F:295 , HIS F:298 , PHE F:311 , SER F:328 , GLU F:336 , PHE F:345BINDING SITE FOR RESIDUE EDO F1481
41EC5SOFTWARELYS F:466 , PHE F:467 , GLU F:468 , PHE F:469BINDING SITE FOR RESIDUE EDO F1482
42EC6SOFTWAREGLY F:16 , VAL F:17 , LYS F:18 , THR F:65 , TRP F:66 , THR F:67 , THR F:68 , HOH F:2011 , HOH F:2027BINDING SITE FOR RESIDUE EDO F1483
43EC7SOFTWARETYR G:24 , THR G:68 , VAL G:69 , ASP G:72 , HOH G:2025 , HOH G:2027 , HOH G:2220BINDING SITE FOR RESIDUE EDO G1476
44EC8SOFTWARELYS G:18 , THR G:65 , TRP G:66 , THR G:67 , THR G:68 , HOH G:2220BINDING SITE FOR RESIDUE EDO G1478
45EC9SOFTWARELYS G:466 , PHE G:467 , GLU G:468 , PHE G:469 , HOH G:2221BINDING SITE FOR RESIDUE EDO G1480
46FC1SOFTWARETYR H:24 , THR H:68 , VAL H:69 , ASP H:72 , EDO H:1482 , HOH H:2033 , HOH H:2231 , HOH H:2232BINDING SITE FOR RESIDUE EDO H1476
47FC2SOFTWARELYS H:466 , PHE H:467 , GLU H:468 , PHE H:469 , EDO H:1483BINDING SITE FOR RESIDUE EDO H1478
48FC3SOFTWAREHOH G:2221 , TYR H:20 , GLU H:52BINDING SITE FOR RESIDUE EDO H1480
49FC4SOFTWAREARG H:295 , SER H:328 , GLY H:329 , GLU H:336 , PHE H:345BINDING SITE FOR RESIDUE EDO H1481
50FC5SOFTWAREGLY H:16 , LYS H:18 , THR H:65 , TRP H:66 , THR H:67 , THR H:68 , EDO H:1476 , HOH H:2007 , HOH H:2231BINDING SITE FOR RESIDUE EDO H1482
51FC6SOFTWAREPHE H:469 , EDO H:1478 , HOH H:2234BINDING SITE FOR RESIDUE EDO H1483
52FC7SOFTWARETYR C:226 , LYS C:227 , ALA C:230 , LYS I:49 , GLU I:55 , HOH I:2057 , HOH I:2058BINDING SITE FOR RESIDUE EDO I1141
53FC8SOFTWAREGLY I:37 , ILE I:39 , GLY I:82 , CYS I:83 , ARG I:84 , HOH I:2017BINDING SITE FOR RESIDUE EDO I1142
54FC9SOFTWARETYR H:226 , LYS H:227 , HOH H:2113 , LYS J:49 , GLU J:55 , HOH J:2031BINDING SITE FOR RESIDUE EDO J1141
55GC1SOFTWAREGLY J:37 , TRP J:38 , PHE J:81 , GLY J:82 , CYS J:83BINDING SITE FOR RESIDUE EDO J1142
56GC2SOFTWAREGLY K:37 , TRP K:38 , ILE K:39 , PHE K:81 , GLY K:82 , CYS K:83BINDING SITE FOR RESIDUE EDO K1141
57GC3SOFTWARETYR E:226 , HOH E:2113 , LYS K:49 , GLU K:55 , HOH K:2034 , HOH K:2036BINDING SITE FOR RESIDUE EDO K1142
58GC4SOFTWARETYR B:226 , ALA B:230 , HOH B:2111 , LYS L:49 , GLU L:55BINDING SITE FOR RESIDUE EDO L1141
59GC5SOFTWARETYR G:226 , LYS G:227 , LYS M:49 , GLU M:55 , SER M:56BINDING SITE FOR RESIDUE EDO M1141
60GC6SOFTWAREILE N:39 , GLY N:82BINDING SITE FOR RESIDUE EDO N1141
61GC7SOFTWARELYS N:49 , GLU N:55 , ASP N:69 , HOH N:2031BINDING SITE FOR RESIDUE EDO N1142
62GC8SOFTWARETYR A:226 , HOH A:2120 , LYS O:49 , GLU O:55 , HOH O:2030BINDING SITE FOR RESIDUE EDO O1141
63GC9SOFTWAREGLY O:37 , TRP O:38 , ILE O:39 , PHE O:81 , GLY O:82 , CYS O:83BINDING SITE FOR RESIDUE EDO O1142
64HC1SOFTWAREGLY E:10 , GLY P:37 , TRP P:38 , ILE P:39 , GLY P:82BINDING SITE FOR RESIDUE EDO P1141

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:247 -B:247
2C:247 -D:247
3E:247 -F:247
4G:247 -H:247

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Lys A:175 -Pro A:176
2Lys B:175 -Pro B:176
3Lys C:175 -Pro C:176
4Lys D:175 -Pro D:176
5Lys E:175 -Pro E:176
6Lys F:175 -Pro F:176
7Lys G:175 -Pro G:176
8Lys H:175 -Pro H:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 8)

Asymmetric/Biological Unit (1, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RBL_CHLRE_001 *L46PRBL_CHLRE  ---  ---A/B/C/D/E/F/G/HP46P
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 8)

Asymmetric/Biological Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_CHLRE196-204
 
 
 
 
 
 
 		  8A:196-204
B:196-204
C:196-204
D:196-204
E:196-204
F:196-204
G:196-204
H:196-204

(-) Exons   (0, 0)

(no "Exon" information available for 2V68)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
            RBL_CHLRE    10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68a2 A:10-149 automated matches                                                                                                          d2v68a1 A:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------2v68A01 A:22-148  [code=3.30.70.150, no name defined]                                                                          2v68A02 A:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 A  10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    19        29        39        49        59        69        79        89        99    |  109       119       129       139       149 |     159       169       179       189       199 |     209       219       229       239       249      |259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
                                                                                                                        104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:467
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:467
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68b2 B:9-149 automated matches                                                                                                            d2v68b1 B:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -------------2v68B01 B:22-148  [code=3.30.70.150, no name defined]                                                                          2v68B02 B:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhh.hhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 B   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468       
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:467
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:467
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68c2 C:9-149 automated matches                                                                                                            d2v68c1 C:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -------------2v68C01 C:22-148  [code=3.30.70.150, no name defined]                                                                          2v68C02 C:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeee....hhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 C   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468       
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:465
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:465
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
            RBL_CHLRE    11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68d2 D:11-149 automated matches                                                                                                         d2v68d1 D:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -----------2v68D01 D:22-148  [code=3.30.70.150, no name defined]                                                                          2v68D02 D:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -----------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 D  11 AGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    20        30        40        50        60        70        80        90       100   |   110       120       130       140       150|      160       170       180       190       200|      210       220       230       240       250     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470     
                                                                                                                       104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain E from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
            RBL_CHLRE    10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68e2 E:10-149 automated matches                                                                                                          d2v68e1 E:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------2v68E01 E:22-148  [code=3.30.70.150, no name defined]                                                                          2v68E02 E:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 E  10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    19        29        39        49        59        69        79        89        99    |  109       119       129       139       149 |     159       169       179       189       199 |     209       219       229       239       249      |259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
                                                                                                                        104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain F from PDB  Type:PROTEIN  Length:467
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:467
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       
            RBL_CHLRE     9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68f2 F:9-149 automated matches                                                                                                            d2v68f1 F:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -------------2v68F01 F:22-148  [code=3.30.70.150, no name defined]                                                                          2v68F02 F:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 F   9 AGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    18        28        38        48        58        68        78        88        98     | 108       118       128       138       148  |    158       168       178       188       198  |    208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368|      378       388       398       408       418       428       438       448       458       468       
                                                                                                                         104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain G from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
            RBL_CHLRE    10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68g2 G:10-149 automated matches                                                                                                          d2v68g1 G:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------2v68G01 G:22-148  [code=3.30.70.150, no name defined]                                                                          2v68G02 G:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 G  10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    19        29        39        49        59        69        79        89        99    |  109       119       129       139       149 |     159       169       179       189       199 |     209       219       229       239       249      |259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
                                                                                                                        104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain H from PDB  Type:PROTEIN  Length:466
 aligned with RBL_CHLRE | P00877 from UniProtKB/Swiss-Prot  Length:475

    Alignment length:466
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
            RBL_CHLRE    10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYPIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWCSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
               SCOP domains d2v68h2 H:10-149 automated matches                                                                                                          d2v68h1 H:150-475 automated matches                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------2v68H01 H:22-148  [code=3.30.70.150, no name defined]                                                                          2v68H02 H:149-462 Rubisco                                                                                                                                                                                                                                                                                                 ------------- CATH domains
           Pfam domains (1) -----------RuBisCO_large_N-2v68H09 H:21-146                                                                                              -------RuBisCO_large-2v68H01 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (1)
           Pfam domains (2) -----------RuBisCO_large_N-2v68H10 H:21-146                                                                                              -------RuBisCO_large-2v68H02 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (2)
           Pfam domains (3) -----------RuBisCO_large_N-2v68H11 H:21-146                                                                                              -------RuBisCO_large-2v68H03 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (3)
           Pfam domains (4) -----------RuBisCO_large_N-2v68H12 H:21-146                                                                                              -------RuBisCO_large-2v68H04 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (4)
           Pfam domains (5) -----------RuBisCO_large_N-2v68H13 H:21-146                                                                                              -------RuBisCO_large-2v68H05 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (5)
           Pfam domains (6) -----------RuBisCO_large_N-2v68H14 H:21-146                                                                                              -------RuBisCO_large-2v68H06 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (6)
           Pfam domains (7) -----------RuBisCO_large_N-2v68H15 H:21-146                                                                                              -------RuBisCO_large-2v68H07 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (7)
           Pfam domains (8) -----------RuBisCO_large_N-2v68H16 H:21-146                                                                                              -------RuBisCO_large-2v68H08 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (8)
         Sec.struct. author ..........hhhhhh...........eeeeeeee....hhhhhhhhhhhhh.......hhhhhhhhhhhhh.eeeeeee.......eeeeee.........hhhhhhhhhhhhhhh...eeeeeeeeee.hhhhhh.......hhhhhhhhhh.....eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh......ee....hhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhh.eeeee..hhhhhhh....eehhhhhhhhhhhhh..eee..........hhhhhhhhhhhhhh......hhhh.............eeeee...hhhhhhhhhhhhh...eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 H  10 GAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYpIDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVGpPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTkDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEEMMKRAVcAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHLHSGTAVGKLEGEREVILGFVDLMRDDYVEKDRSRGIYFTQDWcSMPGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL 475
                                    19        29        39        49        59        69        79        89        99    |  109       119       129       139       149 |     159       169       179       189       199 |     209       219       229       239       249      |259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469      
                                                                                                                        104-HYP                                        151-HYP                                           201-KCX                                                256-SMC                                                                                                          369-SMC                                                                                                      


Chain I from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68i_ I: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68I00 I:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 I   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain J from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68j_ J: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68J00 J:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 J   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain K from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68k_ K: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68K00 K:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 K   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain L from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68l_ L: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68L00 L:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 L   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain M from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68m_ M: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68M00 M:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhh..eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 M   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain N from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68n_ N: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68N00 N:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 N   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain O from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68o_ O: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68O00 O:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 O   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME                                                                                                                                       


Chain P from PDB  Type:PROTEIN  Length:140
 aligned with RBS1_CHLRE | P00873 from UniProtKB/Swiss-Prot  Length:185

    Alignment length:140
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185
           RBS1_CHLRE    46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 185
               SCOP domains d2v68p_ P: automated matches                                                                                                                 SCOP domains
               CATH domains -2v68P00 P:2-140  [code=3.30.190.10, no name defined]                                                                                        CATH domains
           Pfam domains (1) ----------RuBisCO_small-2v68P01 P:11-127                                                                                       ------------- Pfam domains (1)
           Pfam domains (2) ----------RuBisCO_small-2v68P02 P:11-127                                                                                       ------------- Pfam domains (2)
           Pfam domains (3) ----------RuBisCO_small-2v68P03 P:11-127                                                                                       ------------- Pfam domains (3)
           Pfam domains (4) ----------RuBisCO_small-2v68P04 P:11-127                                                                                       ------------- Pfam domains (4)
           Pfam domains (5) ----------RuBisCO_small-2v68P05 P:11-127                                                                                       ------------- Pfam domains (5)
           Pfam domains (6) ----------RuBisCO_small-2v68P06 P:11-127                                                                                       ------------- Pfam domains (6)
           Pfam domains (7) ----------RuBisCO_small-2v68P07 P:11-127                                                                                       ------------- Pfam domains (7)
           Pfam domains (8) ----------RuBisCO_small-2v68P08 P:11-127                                                                                       ------------- Pfam domains (8)
         Sec.struct. author .....................hhhhhhhhhhhhhhhh.eeeeeeehhhhh...hhhhhhh.............eee........hhhhhhhhhhhhhhhh...eeeeeeee....eeeeeeeee.........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v68 P   1 mMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKTARDFQPANKRSV 140
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140
                            1-MME
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: RuBisCO_large] (36)
(-)
Clan: no clan defined [family: RuBisCO_large_N] (27)
(-)
Clan: no clan defined [family: RuBisCO_small] (23)

(-) Gene Ontology  (13, 23)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (RBL_CHLRE | P00877)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

Chain I,J,K,L,M,N,O,P   (RBS1_CHLRE | P00873)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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  2v68
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  RBS1_CHLRE | P00873
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  4.1.1.39
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBL_CHLRE | P00877: 1gk8 1ir2 1uw9 1uwa 1uzd 1uzh 2v63 2v67 2v69 2v6a 2vdh 2vdi 5bs2
        RBS1_CHLRE | P00873: 1gk8 1uw9 1uwa 1uzd 1uzh 2v63 2v67 2v69 2v6a 2vdh 2vdi

(-) Related Entries Specified in the PDB File

1gk8 RUBISCO FROM CHLAMYDOMONAS REINHARDTII
1ir2 CRYSTAL STRUCTURE OF ACTIVATED RIBULOSE-1,5 -BISPHOSPHATECARBOXYLASE/OXYGENASE (RUBISCO) FROM GREEN ALGA,CHLAMYDOMONAS REINHARDTII COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-BISPHOSPHATE ( 2-CABP)
1uw9 L290F-A222T CHLAMYDOMONAS RUBISCO MUTANT
1uwa L290F MUTANT RUBISCO FROM CHLAMYDOMONAS
1uzd CHLAMYDOMONAS,SPINACH CHIMERIC RUBISCO
1uzh A CHIMERIC CHLAMYDOMONAS, SPINACH RUBISCO ENZYME
2v63 CRYSTAL STRUCTURE OF RUBISCO FROM CHLAMYDOMONAS REINHARDTII WITH A LARGE-SUBUNIT V331A MUTATION
2v67 CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH A LARGE-SUBUNIT SUPRESSOR MUTATION T342I
2v69 CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH A LARGE-SUBUNIT MUTATION D473E
2v6a CRYSTAL STRUCTURE OF CHLAMYDOMONAS REINHARDTII RUBISCO WITH LARGE-SUBUNIT MUTATIONS V331A, G344S