Chain A from PDB Type:PROTEIN Length:704
aligned with DPOL_BPT7 | P00581 from UniProtKB/Swiss-Prot Length:704
Alignment length:704
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700
DPOL_BPT7 1 MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH 704
SCOP domains d2ajqa1 A:1-210 Exonuclease domain of T7 DNA polymerase d2ajqa2 A:211-704 T7 phage DNA polymerase SCOP domains
CATH domains 2ajqA01 A:1-232 [code=3.30.420.10, no name defined] 2ajqA02 A:233-414 Taq DNA Polymerase; Chain T, domain 4 2ajqA03 A:415-477,A:590-704 2ajqA04 A:478-589 5' to 3' exonuclease, C-terminal subdomain 2ajqA03 A:415-477,A:590-704 [code=3.30.70.370, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee..hhhhh..eeeeeeee.......eehhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhhh.......hhh.eeehhhhhhhhh.hhhhhhhhhhhhh..hhhhh...hhhhhhhhhh....hhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee...........................................................eeeeeee....hhhhhhhhhhhh...............hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh.....ee..eee.........eee..hhhhh......hhhhhhhhhhhhhh.........eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeee..eeeeee...eee.....eee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeeee..eeeeee.hhhhhhhhhhhhhhhhhhhhhhh.......eeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_A ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ajq A 1 MIVSAIAANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH 704
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700
Chain B from PDB Type:PROTEIN Length:105
aligned with THIO_ECOLI | P0AA25 from UniProtKB/Swiss-Prot Length:109
Alignment length:105
13 23 33 43 53 63 73 83 93 103
THIO_ECOLI 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
SCOP domains d2ajqb_ B: Thioredoxin SCOP domains
CATH domains 2ajqB00 B:3-107 Glutaredoxin CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...................eeeeeee...hhhhhhhhhhhhhhhhhh....eeeeee.....hhhhhhh..ee.eeeeee...eeeeee...hhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------THIOREDOXIN_1 ----------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2ajq B 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
12 22 32 42 52 62 72 82 92 102
Chain F from PDB Type:PROTEIN Length:689
aligned with DPOL_BPT7 | P00581 from UniProtKB/Swiss-Prot Length:704
Alignment length:704
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700
DPOL_BPT7 1 MIVSDIEANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFKKPKNKAQREGREPCELDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH 704
SCOP domains d2ajqf1 F:1-210 Exonuclease domain of T7 DNA polymerase d2ajqf2 F:211-704 T7 phage DNA polymerase SCOP domains
CATH domains 2ajqF01 F:1-232 [code=3.30.420.10, no name defined] 2ajqF02 F:233-414 Taq DNA Polymerase; Chain T, domain 4 2ajqF03 F:415-477,F:590-704 2ajqF04 F:478-589 5' to 3' exonuclease, C-terminal subdomain 2ajqF03 F:415-477,F:590-704 [code=3.30.70.370, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee..hhhhh..eeeeeeee.....eeeehhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhhh.......hhh.eeehhhhhhhhh.hhhhhhhhhhhhh..........hhhhhhhhh.......hhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee.hhhhhhhhhhhhhhhhhhhhhhhhhhhheeeee................................---------------............eeeeeee....hhhhhhhhhhhh...............hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh....ee..eee.........eee.............hhhhhhhhhhhhhh.........eeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeee..eeeeee...eee.....eee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee...eeeeee.hhhhhhhhhhhhhhhhhhhhhhh.......eeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYMERASE_A ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2ajq F 1 MIVSAIAANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARRSELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRIKTPKVGGIFK---------------LDTREYVAGAPYTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESSQWVAGEQQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEMLVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGPNWAICH 704
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 |- - | 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700
299 315
Chain I from PDB Type:PROTEIN Length:105
aligned with THIO_ECOLI | P0AA25 from UniProtKB/Swiss-Prot Length:109
Alignment length:105
13 23 33 43 53 63 73 83 93 103
THIO_ECOLI 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
SCOP domains d2ajqi_ I: Thioredoxin SCOP domains
CATH domains 2ajqI00 I:3-107 Glutaredoxin CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....................eeeee...hhhhhhhhhhh..............eee......hhhhh...ee.eeee.........ee...hhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------THIOREDOXIN_1 ----------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
2ajq I 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
12 22 32 42 52 62 72 82 92 102
Chain P from PDB Type:DNA Length:20
2ajq P 803 AAAACGACGGCCAGTGCCAt 822
812 822
822-2DT
Chain T from PDB Type:DNA Length:22
2ajq T 852 TGGATGGCACTGGCCGTCGTTT 873
861 871
Chain X from PDB Type:DNA Length:21
2ajq X 902 GAAAACGACGGCCAGTGCCAt 922
911 921|
922-2DT
Chain Z from PDB Type:DNA Length:25
2ajq Z 952 TGGATGGCACTGGCCGTCGTTTTCG 976
961 971
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |