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Class: Alpha and beta proteins (a/b) (23833)
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Fold: Ribonuclease H-like motif (1424)
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Superfamily: Ribonuclease H-like (775)
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Family: automated matches (127)
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Protein domain: automated matches (127)
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Archaeoglobus fulgidus [TaxId: 2234] (1)
3P83D:; E:; F:STRUCTURE OF THE PCNA:RNASE HII COMPLEX FROM ARCHAEOGLOBUS FULGIDUS.
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Bovine immunodeficiency virus [TaxId: 417296] (2)
3KKRA:CRYSTAL STRUCTURE OF CATALYTIC CORE DOMAIN OF BIV INTEGRASE IN CRYSTAL FORM I
3KKSA:; B:CRYSTAL STRUCTURE OF CATALYTIC CORE DOMAIN OF BIV INTEGRASE IN CRYSTAL FORM II
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Chlorobaculum tepidum [TaxId: 1097] (1)
3H08A:; B:CRYSTAL STRUCTURE OF THE RIBONUCLEASE H1 FROM CHLOROBIUM TEPIDUM
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Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (3)
2P51A:CRYSTAL STRUCTURE OF THE S. POMBE POP2P DEADENYLATION SUBUNIT
3G0ZA:STRUCTURE OF S. POMBE POP2P - ZN2+ AND MN2+ BOUND FORM
3G10A:STRUCTURE OF S. POMBE POP2P - MG2+ AND MN2+ BOUND FORM
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Geobacillus kaustophilus [TaxId: 1462] (8)
3PV8A:298-468; D:298-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDTTP-DA IN CLOSED CONFORMATION
3PX0A:298-468; D:298-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION
3PX4A:298-468; D:298-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDCTP-DA MISMATCH (WOBBLE) IN AJAR CONFORMATION
3PX6A:298-468; D:296-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATION
4DSEA:297-468; D:298-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT F710Y, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+
4DSFA:297-468; D:298-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT F710Y, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+
4EZ6A:297-468; D:297-468BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 1
4EZ9A:298-468; D:298-468BACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 2
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Geobacillus kaustophilus [TaxId: 235909] (6)
4DQPA:297-468; D:298-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND DDCTP (PAIRED WITH DG OF TEMPLATE)
4DQQA:297-468; D:293-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+
4DQRA:297-468; D:298-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+
4DQSA:298-468BINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT AND DUPLEX DNA WITH RC IN PRIMER TERMINUS PAIRED WITH DG OF TEMPLATE
4DS4A:297-468; D:296-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MN2+
4DS5A:297-468; D:296-468TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MG2+
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Geobacillus sp. [TaxId: 129337] (4)
3TANA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-1) POSITION
3TAPA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-3) POSITION
3TAQA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-4) POSITION
3TARA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-6) POSITION
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Geobacillus stearothermophilus [TaxId: 1422] (1)
2HW3A:297-468T:O6-METHYL-GUANINE PAIR IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION)
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Hiv-1 m:b_hxb2r [TaxId: 11706] (21)
2OPPA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW420867X.
2OPQA:430-537CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW420867X.
2OPRA:430-548CRYSTAL STRUCTURE OF K101E MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW420867X.
2OPSA:430-543CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW420867X.
2RF2A:430-557HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR 7E (NNRTI)
2YNFA:430-558HIV-1 REVERSE TRANSCRIPTASE Y188L MUTANT IN COMPLEX WITH INHIBITOR GSK560
2YNGA:430-558HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR GSK560
2YNHA:430-558HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR GSK500
2YNIA:430-558HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR GSK952
3C6TA:430-557CRYSTAL STRUCTURE OF HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR 14
3C6UA:430-557CRYSTAL STRUCTURE OF HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR 22
3FFIA:430-553HIV-1 RT WITH PYRIDONE NON-NUCLEOSIDE INHIBITOR
3I0RA:430-544CRYSTAL STRUCTURE OF HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR 3
3I0SA:430-557CRYSTAL STRUCTURE OF HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR 7
3MEDA:430-552HIV-1 K103N REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC125
3MEGA:430-552HIV-1 K103N REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC278
3T19A:430-557CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (WILD TYPE) IN COMPLEX WITH INHIBITOR M05
3T1AA:430-557CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (K103N MUTANT) IN COMPLEX WITH INHIBITOR M05
3TAMA:430-557CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (K103N MUTANT) IN COMPLEX WITH INHIBITOR M06
4KV8A:430-554CRYSTAL STRUCTURE OF HIV RT IN COMPLEX WITH BILR0355BS
4NCGA:430-556DISCOVERY OF DORAVIRINE, AN ORALLY BIOAVAILABLE NON-NUCLEOSIDE REVERSE TRANSCRIPTASE INHIBITOR POTENT AGAINST A WIDE RANGE OF RESISTANT MUTANT HIV VIRUSES
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Human (Homo sapiens) [TaxId: 9606] (2)
2QK9A:HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 18-MER RNA/DNA HYBRID
2QKBA:; B:HUMAN RNASE H CATALYTIC DOMAIN MUTANT D210N IN COMPLEX WITH 20-MER RNA/DNA HYBRID
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Human immunodeficiency virus 1 [TaxId: 11676] (14)
2HNDA:430-537CRYSTAL STRUCTURE OF K101E MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
2HNYA:430-537CRYSTAL STRUCTURE OF E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
2HNZA:430-537CRYSTAL STRUCTURE OF E138K MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-2
2I5JA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH DHBNH, AN RNASE H INHIBITOR
2JLEA:430-545NOVEL INDAZOLE NNRTIS CREATED USING MOLECULAR TEMPLATE HYBRIDIZATION BASED ON CRYSTALLOGRAPHIC OVERLAYS
2VG5A:430-557CRYSTAL STRUCTURES OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXES WITH THIOCARBAMATE NON-NUCLEOSIDE INHIBITORS
2VG6A:430-551CRYSTAL STRUCTURES OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXES WITH THIOCARBAMATE NON-NUCLEOSIDE INHIBITORS
2VG7A:430-551CRYSTAL STRUCTURES OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXES WITH THIOCARBAMATE NON-NUCLEOSIDE INHIBITORS
2ZD1A:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH TMC278 (RILPIVIRINE), A NON-NUCLEOSIDE RT INHIBITOR
2ZE2A:430-552CRYSTAL STRUCTURE OF L100I/K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH TMC278 (RILPIVIRINE), A NON-NUCLEOSIDE RT INHIBITOR
3BGRA:430-552CRYSTAL STRUCTURE OF K103N/Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH TMC278 (RILPIVIRINE), A NON-NUCLEOSIDE RT INHIBITOR
4KKOA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 4-((4-METHOXY-6-(2-MORPHOLINOETHOXY)-1,3,5-TRIAZIN-2-YL)AMINO)-2-((3-METHYLBUT-2-EN-1-YL)OXY)BENZONITRILE (JLJ513), A NON-NUCLEOSIDE INHIBITOR
4LSLA:430-548CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH (E)-3-(3-(4-CHLORO-2-(2-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)ETHOXY) PHENOXY)PHENYL)ACRYLONITRILE (JLJ476), A NON-NUCLEOSIDE INHIBITOR
4MFBA:430-547CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 8-(2-(2-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)ETHOXY)PHENOXY) INDOLIZINE-2-CARBONITRILE (JLJ555), A NON-NUCLEOSIDE INHIBITOR
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Human immunodeficiency virus type 1 bh10 [TaxId: 11678] (12)
2IAJA:430-551CRYSTAL STRUCTURE OF K103N/Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH ATP
2IC3A:430-558CRYSTAL STRUCTURE OF K103N/Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH NONNUCLEOSIDE INHIBITOR HBY 097
2YKMA:430-558CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH A DIFLUOROMETHYLBENZOXAZOLE (DFMB) PYRIMIDINE THIOETHER DERIVATIVE, A NON-NUCLEOSIDE RT INHIBITOR (NNRTI)
2YKNA:430-558CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH A DIFLUOROMETHYLBENZOXAZOLE (DFMB) PYRIMIDINE THIOETHER DERIVATIVE, A NON-NUCLEOSIDE RT INHIBITOR (NNRTI)
3DLKA:430-554CRYSTAL STRUCTURE OF AN ENGINEERED FORM OF THE HIV-1 REVERSE TRANSCRIPTASE, RT69A
3IG1A:430-554HIV-1 REVERSE TRANSCRIPTASE WITH THE INHIBITOR BETA-THUJAPLICINOL BOUND AT THE RNASE H ACTIVE SITE
3IRXA:430-554CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH THE NON-NUCLEOSIDE RT INHIBITOR (E)-S-METHYL 5-(1-(3,7-DIMETHYL-2-OXO-2,3-DIHYDROBENZO[D]OXAZOL-5-YL)-5-(5-METHYL-1,3,4-OXADIAZOL-2-YL)PENT-1-ENYL)-2-METHOXY-3-METHYLBENZOTHIOATE.
3IS9A:430-554CRYSTAL STRUCTURE OF THE HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH THE ALKENYLDIARYLMETHANE (ADAM) NON-NUCLEOSIDE RT INHIBITOR DIMETHYL 3,3'-(6-METHOXY-6-OXOHEX-1-ENE-1,1-DIYL)BIS(5-CYANO-6-METHOXYBENZOATE).
3QO9A:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH TSAO-T, A NON-NUCLEOSIDE RT INHIBITOR (NNRTI)
4H4OA:430-548CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH (E)-3-(3-(2-(2-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)ETHOXY)- 4-FLUOROPHENOXY)-5-FLUOROPHENYL)ACRYLONITRILE (JLJ506), A NON-NUCLEOSIDE INHIBITOR
4I2PA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RILPIVIRINE (TMC278) BASED ANALOGUE
4I2QA:430-554CRYSTAL STRUCTURE OF K103N/Y181C MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH RILPIVIRINE (TMC278) ANALOGUE
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Human immunodeficiency virus type 1 [TaxId: 11678] (14)
3KLIA:430-551CRYSTAL STRUCTURE OF UNLIGANDED AZT-RESISTANT HIV-1 REVERSE TRANSCRIPTASE
3QLHA:430-554HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH MANICOL AT THE RNASE H ACTIVE SITE AND TMC278 (RILPIVIRINE) AT THE NNRTI BINDING POCKET
4DG1A:430-549CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH POLYMORPHISM MUTATION K172A AND K173A
4G1QA:430-554CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH RILPIVIRINE (TMC278, EDURANT), A NON-NUCLEOSIDE RT-INHIBITING DRUG
4H4MA:430-548CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH (E)-3-(3-CHLORO-5-(4-CHLORO-2-(2-(2,4-DIOXO-3,4- DIHYDROPYRIMIDIN-1(2H)-YL)ETHOXY)PHENOXY)PHENYL)ACRYLONITRILE (JLJ494), A NON-NUCLEOSIDE INHIBITOR
4ICLA:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT THE INCOMING DNTP BINDING SITE
4ID5A:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT THE RNASE H PRIMER GRIP SITE
4IDKA:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT THE 428 SITE
4IFVA:430-554DETECTING ALLOSTERIC SITES OF HIV-1 REVERSE TRANSCRIPTASE BY X-RAY CRYSTALLOGRAPHIC FRAGMENT SCREENING
4IFYA:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT THE KNUCKLES SITE
4IG0A:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT THE 507 SITE
4IG3A:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT NEAR KNUCKLES SITE
4KFBA:430-554HIV-1 REVERSE TRANSCRIPTASE WITH BOUND FRAGMENT AT NNRTI ADJACENT SITE
4KO0A:430-554CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH AN ANILINYLPYRIMIDINE DERIVATIVE (JLJ-135)
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Human immunodeficiency virus type 1 [TaxId: 11706] (19)
3DI6A:430-555HIV-1 RT WITH PYRIDAZINONE NON-NUCLEOSIDE INHIBITOR
3DM2A:430-539CRYSTAL STRUCTURE OF HIV-1 K103N MUTANT REVERSE TRANSCRIPTASE IN COMPLEX WITH GW564511.
3DMJA:430-539CRYSTAL STRUCTURE OF HIV-1 V106A AND Y181C MUTANT REVERSE TRANSCRIPTASE IN COMPLEX WITH GW564511.
3DOKA:430-539CRYSTAL STRUCTURE OF K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW678248.
3DRPA:430-557HIV REVERSE TRANSCRIPTASE IN COMPLEX WITH INHIBITOR R8E
3DRRA:430-557HIV REVERSE TRANSCRIPTASE Y181C MUTANT IN COMPLEX WITH INHIBITOR R8E
3DRSA:430-548HIV REVERSE TRANSCRIPTASE K103N MUTANT IN COMPLEX WITH INHIBITOR R8D
3DYAA:430-555HIV-1 RT WITH NON-NUCLEOSIDE INHIBITOR ANNULATED PYRAZOLE 1
3E01A:430-556HIV-RT WITH NON-NUCLEOSIDE INHIBITOR ANNULATED PYRAZOLE 2
3KJVA:430-556HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DNA
3KK1A:430-555HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH NUCEOTIDE INHIBITOR GS-9148-DIPHOSPHATE BOUND IN NUCLEOTIDE SITE
3KK2A:430-555HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH DATP BOUND IN THE NUCLEOTIDE BINDING SITE
3KK3A:430-555HIV-1 REVERSE TRANSCRIPTASE-DNA COMPLEX WITH GS-9148 TERMINATED PRIMER
3LP0A:430-557HIV-1 REVERSE TRANSCRIPTASE WITH INHIBITOR
3LP1A:430-557HIV-1 REVERSE TRANSCRIPTASE WITH INHIBITOR
3LP2A:430-557HIV-1 REVERSE TRANSCRIPTASE WITH INHIBITOR
3M8PA:430-555HIV-1 RT WITH NNRTI TMC-125
3M8QA:430-557HIV-1 RT WITH AMINOPYRIMIDINE NNRTI
3NBPA:430-557HIV-1 REVERSE TRANSCRIPTASE WITH AMINOPYRIMIDINE INHIBITOR 2
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Moloney murine leukemia virus [TaxId: 11801] (1)
2HB5A:CRYSTAL STRUCTURE OF THE MOLONEY MURINE LEUKEMIA VIRUS RNASE H DOMAIN
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Mouse (Mus musculus) [TaxId: 10090] (6)
2IOCB:THE CRYSTAL STRUCTURE OF TREX1 EXPLAINS THE 3' NUCLEOTIDE SPECIFICITY AND REVEALS A POLYPROLINE II HELIX FOR PROTEIN PARTENRING
2O4GB:; C:; D:STRUCTURE OF TREX1 IN COMPLEX WITH A NUCLEOTIDE
2OA8A:; B:CRYSTAL STRUCTURE OF MTREX1 WITH SSDNA
3B6OA:; B:; C:; D:STRUCTURE OF TREX1 IN COMPLEX WITH A NUCLEOTIDE AND AN INHIBITOR ION (LITHIUM)
3B6PA:; B:; C:; D:STRUCTURE OF TREX1 IN COMPLEX WITH A NUCLEOTIDE AND INHIBITOR IONS (SODIUM AND ZINC)
3U6FA:; B:MOUSE TREX1 D200N MUTANT
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Pyrococcus furiosus [TaxId: 2261] (3)
2JGUA:1-347CRYSTAL STRUCTURE OF DNA-DIRECTED DNA POLYMERASE
3A2FA:1-347CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS DNA POLYMERASE/PCNA MONOMER MUTANT COMPLEX
4AHCA:1-347; B:1-347CRYSTAL STRUCTURE OF AN EVOLVED REPLICATING DNA POLYMERASE
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Sulfolobus tokodaii [TaxId: 273063] (1)
3ALYA:; B:CRYSTAL STRUCTURE OF RNASE HI FROM SULFOLOBUS TOKODAII WITH C-TERMINAL DELETION
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Thermococcus kodakarensis [TaxId: 69014] (1)
4K8ZA:1-347KOD POLYMERASE IN BINARY COMPLEX WITH DSDNA
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uncultured organism [TaxId: 155900] (1)
3U3GA:; B:; C:; D:STRUCTURE OF LC11-RNASE H1 ISOLATED FROM COMPOST BY METAGENOMIC APPROACH: INSIGHT INTO THE STRUCTURAL BASES FOR UNUSUAL ENZYMATIC PROPERTIES OF STO-RNASE H1
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Xanthomonas campestris pv. campestris [TaxId: 340] (1)
2GBZA:THE CRYSTAL STRUCTURE OF XC847 FROM XANTHOMONAS CAMPESTRIS: A 3-5 OLIGORIBONUCLEASE OF DNAQ FOLD FAMILY WITH A NOVEL OPPOSINGLY-SHIFTED HELIX
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Xenotropic mulv-related virus vp35 [TaxId: 356663] (3)
3V1OA:CRYSTAL STRUCTURES OF THE REVERSE TRANSCRIPTASE-ASSOCIATED RIBONUCLEASE H DOMAIN OF XENOTROPIC MURINE LEUKEMIA-VIRUS RELATED VIRUS
3V1QA:CRYSTAL STRUCTURES OF THE REVERSE TRANSCRIPTASE-ASSOCIATED RIBONUCLEASE H DOMAIN OF XENOTROPIC MURINE LEUKEMIA-VIRUS RELATED VIRUS
3V1RA:CRYSTAL STRUCTURES OF THE REVERSE TRANSCRIPTASE-ASSOCIATED RIBONUCLEASE H DOMAIN OF XMRV WITH INHIBITOR BETA-THUJAPLICINOL
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Xenotropic mulv-related virus [TaxId: 373193] (1)
4E89A:CRYSTAL STRUCTURE OF RNASEH FROM GAMMARETROVIRUS
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Xenotropic mulv-related virus [TaxId: 438045] (1)
3P1GA:CRYSTAL STRUCTURE OF THE XENOTROPIC MURINE LEUKEMIA VIRUS-RELATED VIRUS (XMRV) RNASE H DOMAIN
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Family: CAF1-like ribonuclease (3)
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Protein domain: automated matches (1)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
4B8AB:STRUCTURE OF YEAST NOT1 MIF4G DOMAIN CO-CRYSTALLIZED WITH CAF1
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Protein domain: CCR4-NOT transcription complex subunit 7, CAF1 (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
2D5RA:11-262CRYSTAL STRUCTURE OF A TOB-HCAF1 COMPLEX
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Protein domain: Pop2 RNase D domain (1)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1UOCA:; B:X-RAY STRUCTURE OF THE RNASE DOMAIN OF THE YEAST POP2 PROTEIN
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Family: DnaQ-like 3'-5' exonuclease (253)
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Protein domain: automated matches (19)
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Coxiella burnetii [TaxId: 777] (1)
3TR8A:; B:STRUCTURE OF AN OLIGORIBONUCLEASE (ORN) FROM COXIELLA BURNETII
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Escherichia coli K-12 [TaxId: 83333] (2)
2IS3A:; B:; C:; D:CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE T
3K5OA:2-389; B:2-389CRYSTAL STRUCTURE OF E.COLI POL II
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Escherichia coli [TaxId: 562] (13)
2GUIA:STRUCTURE AND FUNCTION OF CYCLIZED VERSIONS OF THE PROOFREADING EXONUCLEASE SUBUNIT OF E. COLI DNA POLYMERASE III
2IDOA:; C:STRUCTURE OF THE E. COLI POL III EPSILON-HOT PROOFREADING COMPLEX
2XY8A:PARAMAGNETIC-BASED NMR STRUCTURE OF THE COMPLEX BETWEEN THE N-TERMINAL EPSILON DOMAIN AND THE THETA DOMAIN OF THE DNA POLYMERASE III
3C94A:EXOI/SSB-CT COMPLEX
3C95A:EXONUCLEASE I (APO)
3K5LA:-2-389CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DATP LT(0, 3) TERNARY COMPLEX
3K5MA:-1-389CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DDGTP LT(-2, 2) TERNARY COMPLEX
3K5NA:1-389; B:0-389CRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA BINARY COMPLEX
3NGYA:; B:; C:; D:CRYSTAL STRUCTURE OF RNASE T (E92G MUTANT)
3NGZA:; B:CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A NON-PREFERRED SSDNA (GC) WITH ONE MG IN THE ACTIVE SITE
3NH0A:; B:CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A NON-PREFERRED SSDNA (AAC)
3NH1A:; B:; C:; D:CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A PREFERRED SSDNA (TAGG) WITH TWO MG IN THE ACTIVE SITE
3NH2A:; B:; E:; F:CRYSTAL STRUCTURE OF RNASE T IN COMPLEX WITH A STEM DNA WITH A 3' OVERHANG
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Thermococcus gorgonarius [TaxId: 71997] (3)
2VWJA:1-347URACIL RECOGNITION IN ARCHAEAL DNA POLYMERASES CAPTURED BY X-RAY CRYSTALLOGRAPHY.
2VWKA:1-347URACIL RECOGNITION IN ARCHAEAL DNA POLYMERASES CAPTURED BY X-RAY CRYSTALLOGRAPHY. V93Q POLYMERASE VARIANT
2XHBA:1-347CRYSTAL STRUCTURE OF DNA POLYMERASE FROM THERMOCOCCUS GORGONARIUS IN COMPLEX WITH HYPOXANTHINE-CONTAINING DNA
(-)
Protein domain: Exonuclease domain of family B DNA polymerases (102)
(-)
Bacteriophage RB69 [TaxId: 12353] (92)
1CLQA:1-375CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTION
1IG9A:1-375STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA POLYMERASE
1IH7A:1-375HIGH-RESOLUTION STRUCTURE OF APO RB69 DNA POLYMERASE
1Q9XA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH TETRAHYDROFURAN CONTAINING DNA
1Q9YA:1-375CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CONTAINING DNA
1WAFA:1-375; B:1-375DNA POLYMERASE FROM BACTERIOPHAGE RB69
1WAJA:1-375DNA POLYMERASE FROM BACTERIOPHAGE RB69
2ATQA:1-375RB69 SINGLE-STRANDED DNA BINDING PROTEIN-DNA POLYMERASE FUSION
2DTUA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF THE BETA HAIRPIN LOOP DELETION VARIANT OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE ANALOG
2DY4A:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING THYMINE GLYCOL
2OYQA:1-375; B:1-375; C:1-375; D:2-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH 5-NIMP OPPOSITE AN ABASIC SITE ANALOG
2OZMA:1-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH 5-NITP OPPOSITE AN ABASIC SITE ANALOG
2OZSA:1-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH DATP OPPOSITE DTMP
2P5GA:1-375; B:1-375; C:1-375; D:2-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA WITH DAMP OPPOSITE AN ABASIC SITE ANALOG IN A 21MER TEMPLATE
2P5OA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING AN ABASIC SITE ANALOG
3CFOA:1-375TRIPLE MUTANT APO STRUCTURE
3CQ8A:1-375TERNARY COMPLEX OF THE L415F MUTANT RB69 EXO(-)POLYMERASE
3L8BA:1-375; B:1-375CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO THE OXIDIZED GUANINE LESION GUANIDINOHYDANTOIN
3LDSA:1-375CRYSTAL STRUCTURE OF RB69 GP43 WITH DNA AND DATP OPPOSITE 8-OXOG
3LZIA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE 7,8-DIHYDRO-8-OXOGUANINE
3LZJA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 7,8-DIHYDRO-8-OXOGUANINE
3NAEA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DATP OPPOSITE GUANIDINOHYDANTOIN
3NCIA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE DG AT 1.8 ANGSTROM RESOLUTION
3NDKA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG
3NE6A:1-375RB69 DNA POLYMERASE (S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG
3NGIA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DG
3NHGA:1-375RB69 DNA POLYMERASE (S565G/Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DG
3QESA:1-375RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DGTP OPPOSITE DIFLUOROTOLUENE NUCLEOSIDE
3QETA:1-375RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE DT
3RMAA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL
3RMBA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL
3RMCA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL
3RMDA:1-375; B:1-375; C:1-375; D:1-375CRYSTAL STRUCTURE OF A REPLICATIVE DNA POLYMERASE BOUND TO DNA CONTAINING THYMINE GLYCOL
3S9HA:1-375RB69 DNA POLYMERASE TRIPLE MUTANT(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DIDEOXY-TERMINATED PRIMER IN THE PRESENCE OF CA2+
3SCXA:1-375RB69 DNA POLYMERASE TRIPLE MUTANT(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF CA2+
3SI6A:1-375RB69 DNA POLYMERASE TRIPLE MUTANT (L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF MG2+
3SJJA:1-375RB69 DNA POLYMERASE TRIPLE MUTANT (L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP AND A DEOXY-TERMINATED PRIMER IN THE PRESENCE OF MN2+
3SNNA:1-375RB69 DNA POLYMERASE (L561A/S565G/Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE DG IN THE PRESENCE OF MG2+
3SPYA:1-375RB69 DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPCPP OPPOSITE DA
3SPZA:1-375DNA POLYMERASE(L415A/L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPCPP OPPOSITE DA (CA2+)
3SQ0A:1-375DNA POLYMERASE(L561A/S565G/Y567A) TERNARY COMPLEX WITH DUPNPP OPPOSITE DA (MN2+)
3SQ1A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DUPCPP OPPOSITE DA
3SQ2A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH SEQUENCE)
3SQ4A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (GC RICH SEQUENCE)
3SUNA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH SEQUENCE)
3SUOA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (GC RICH SEQUENCE)
3SUPA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 2AP (GC RICH SEQUENCE)
3SUQA:1-375RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 2AP (AT RICH SEQUENCE)
3TAEA:1-375; B:1-375; C:1-375; D:1-3755-HYDROXYCYTOSINE PAIRED WITH DAMP IN RB69 GP43
3TAGA:1-375; B:1-375; C:1-375; D:1-3755-FLUOROCYTOSINE PAIRED WITH DAMP IN RB69 GP43
3UIQA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX CONTAINING DUPNPP
4DTJA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE AN ABASIC SITE AND DDT/DA AS THE PENULTIMATE BASE-PAIR
4DTMA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDG/DC AS THE PENULTIMATE BASE-PAIR
4DTNA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR
4DTOA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR
4DTPA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP OPPOSITE AN ABASIC SITE AND DDA/DT AS THE PENULTIMATE BASE-PAIR
4DTRA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR
4DTSA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR
4DTUA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR
4DTXA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP OPPOSITE AN ABASIC SITE AND DDC/DG AS THE PENULTIMATE BASE-PAIR
4DU1A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE DT
4DU3A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DDTP OPPOSITE DT WITH 3-DEAZA-ADENINE AT THE N-1 POSITION OF TEMPLATE STRAND
4DU4A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP OPPOSITE DT WITH 3-DEAZA-ADENINE AT THE N-3 POSITION OF PRIMER STRAND
4E3SA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DQTP OPPOSITE DT
4FJ5A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DT
4FJ7A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DT
4FJ8A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DT
4FJ9A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DT
4FJGA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DC
4FJHA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DC
4FJIA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DC
4FJJA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DC
4FJKA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DA
4FJLA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DA
4FJMA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DA
4FJNA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DA
4FJXA:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DATP/DG
4FK0A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DCTP/DG
4FK2A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DTTP/DG
4FK4A:1-375RB69 DNA POLYMERASE TERNARY COMPLEX WITH DGTP/DG
4I9LA:1-375CRYSTAL STRUCTURE OF THE D714A MUTANT OF RB69 DNA POLYMERASE
4J2AA:1-375RB69 DNA POLYMERASE L415A TERNARY COMPLEX
4J2BA:1-375RB69 DNA POLYMERASE L415G TERNARY COMPLEX
4J2EA:1-375RB69 DNA POLYMERASE L415M TERNARY COMPLEX
4KHNA:1-375; B:1-375CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF THE D714A MUTANT OF RB69 DNA POLYMERASE
4KHQA:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WIT DUMPNPP
4KHSA:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH A RIBONUCLEOTIDE AT 0 POSITION
4KHUA:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH A RIBONUCLEOTIDE AT -1 POSITION
4KHWA:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDE AT -2 POSITION
4KHYA:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDE AT -3 POSITION
4KI4A:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDES AT 0 AND -1 POSITION
4KI6A:1-375TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDES AT -1 AND -2 POSITION
(-)
Bacteriophage T4 [TaxId: 10665] (2)
1NOYA:; B:DNA POLYMERASE (E.C.2.7.7.7)/DNA COMPLEX
1NOZA:; B:T4 DNA POLYMERASE FRAGMENT (RESIDUES 1-388) AT 110K
(-)
Desulfurococcus tok [TaxId: 108142] (2)
1D5AA:1-347CRYSTAL STRUCTURE OF AN ARCHAEBACTERIAL DNA POLYMERASE D.TOK. DEPOSITION OF SECOND NATIVE STRUCTURE AT 2.4 ANGSTROM
1QQCA:1-347CRYSTAL STRUCTURE OF AN ARCHAEBACTERIAL DNA POLYMERASE D.TOK
(-)
Escherichia coli [TaxId: 562] (1)
1Q8IA:2-389CRYSTAL STRUCTURE OF ESCHERICHIA COLI DNA POLYMERASE II
(-)
Pyrococcus kodakaraensis [TaxId: 311400] (2)
1WN7A:1-347CRYSTAL STRUCTURE OF ARCHAEAL FAMILY B DNA POLYMERASE MUTANT
1WNSA:1-347CRYSTAL STRUCTURE OF FAMILY B DNA POLYMERASE FROM HYPERTHERMOPHILIC ARCHAEON PYROCOCCUS KODAKARAENSIS KOD1
(-)
Sulfolobus solfataricus [TaxId: 2287] (1)
1S5JA:40-449INSIGHT IN DNA REPLICATION: THE CRYSTAL STRUCTURE OF DNA POLYMERASE B1 FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS
(-)
Thermococcus gorgonarius [TaxId: 71997] (1)
1TGOA:1-347THERMOSTABLE B TYPE DNA POLYMERASE FROM THERMOCOCCUS GORGONARIUS
(-)
Thermococcus sp., 9on-7 [TaxId: 35749] (1)
1QHTA:1-347DNA POLYMERASE FROM THERMOCOCCUS SP. 9ON-7 ARCHAEON
(-)
Protein domain: Exonuclease domain of phi29 DNA polymerase (8)
(-)
Bacteriophage phi-29 [TaxId: 10756] (8)
1XHXA:5-187; B:5-187; C:5-187; D:5-187PHI29 DNA POLYMERASE, ORTHORHOMBIC CRYSTAL FORM
1XHZA:5-187; B:5-187; C:5-187; D:5-187PHI29 DNA POLYMERASE, ORTHORHOMBIC CRYSTAL FORM, SSDNA COMPLEX
1XI1A:5-187; B:5-187PHI29 DNA POLYMERASE SSDNA COMPLEX, MONOCLINIC CRYSTAL FORM
2EX3A:6-187; C:6-187; E:6-187; G:6-187; I:6-187; K:6-187BACTERIOPHAGE PHI29 DNA POLYMERASE BOUND TO TERMINAL PROTEIN
2PY5A:5-187; B:5-187PHI29 DNA POLYMERASE COMPLEXED WITH SINGLE-STRANDED DNA
2PYJA:5-187; B:3-187PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA AND INCOMING NUCLEOTIDE SUBSTRATES (TERNARY COMPLEX)
2PYLA:5-187PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA AND INCOMING NUCLEOTIDE SUBSTRATES (TERNARY COMPLEX)
2PZSA:5-187; B:5-187; C:5-187; D:5-187PHI29 DNA POLYMERASE COMPLEXED WITH PRIMER-TEMPLATE DNA (POST-TRANSLOCATION BINARY COMPLEX)
(-)
Protein domain: Exonuclease domain of prokaryotic DNA polymerase (81)
(-)
Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422] (43)
1L3SA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA.
1L3TA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 10 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A SINGLE DTTP RESIDUE
1L3UA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 11 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP AND A DATP RESIDUE.
1L3VA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 15 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF DTTP, DATP, DCTP, AND DGTP RESIDUES.
1L5UA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 12 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP, A DATP, AND A DCTP RESIDUE.
1LV5A:297-468; B:297-468CRYSTAL STRUCTURE OF THE CLOSED CONFORMATION OF BACILLUS DNA POLYMERASE I FRAGMENT BOUND TO DNA AND DCTP
1NJWA:297-468GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJXA:297-468THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJYA:297-468THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NJZA:297-468CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK0A:297-468ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK4A:297-468GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK5A:297-468ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK6A:297-468CYTOSINE-CYTOSINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK7A:297-468GUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1NK8A:297-468A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
1NK9A:297-468A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP.
1NKBA:297-468A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTTP.
1NKCA:297-468A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER FIVE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, DTTP, AND DATP.
1NKEA:297-468A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
1U45A:299-4688OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE
1U47A:299-468CYTOSINE-8-OXOGUANINE BASE PAIR AT THE POLYMERASE ACTIVE SITE
1U48A:299-468EXTENSION OF A CYTOSINE-8-OXOGUANINE BASE PAIR
1U49A:299-468ADENINE-8OXOGUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
1U4BA:299-468EXTENSION OF AN ADENINE-8OXOGUANINE MISMATCH
1UA0A:297-468AMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNA POLYMERASE
1UA1A:297-468STRUCTURE OF AMINOFLUORENE ADDUCT PAIRED OPPOSITE CYTOSINE AT THE POLYMERASE ACTIVE SITE.
1XC9A:297-468STRUCTURE OF A HIGH-FIDELITY POLYMERASE BOUND TO A BENZO[A]PYRENE ADDUCT THAT BLOCKS REPLICATION
1XWLA:297-468BACILLUS STEAROTHERMOPHILUS (NEWLY IDENTIFIED STRAIN AS YET UNNAMED) DNA POLYMERASE FRAGMENT
2BDPA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA
2HHQA:298-468O6-METHYL-GUANINE:T PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
2HHSA:298-468O6-METHYL:C PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
2HHTA:298-468C:O6-METHYL-GUANINE PAIR IN THE POLYMERASE-2 BASEPAIR POSITION
2HHUA:298-468C:O6-METHYL-GUANINE IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION)
2HHVA:298-468T:O6-METHYL-GUANINE IN THE POLYMERASE-2 BASEPAIR POSITION
2HHWA:297-468; D:297-468DDTTP:O6-METHYL-GUANINE PAIR IN THE POLYMERASE ACTIVE SITE, IN THE CLOSED CONFORMATION
2HHXA:298-468O6-METHYL-GUANINE IN THE POLYMERASE TEMPLATE PREINSERTION SITE
2HVHA:297-468; D:297-468DDCTP:O6MEG PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION)
2HVIA:297-468; D:297-468DDCTP:G PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION)
3BDPA:297-468DNA POLYMERASE I/DNA COMPLEX
3EYZA:297-468COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA (OPEN FORM)
3EZ5A:297-468; D:298-468COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA , DCTP, AND ZINC (CLOSED FORM).
4BDPA:297-468CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OF TWO DATP RESIDUES
(-)
Escherichia coli [TaxId: 562] (14)
1D8YA:324-518CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA
1D9DA:324-518CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0-AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3'
1D9FA:324-518CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH DNA TETRAMER CARRYING 2'-O-(3-AMINOPROPYL)-RNA MODIFICATION 5'-D(TT)-AP(U)-D(T)-3'
1DPIA:326-518STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP
1KFDA:324-518CRYSTAL STRUCTURES OF THE KLENOW FRAGMENT OF DNA POLYMERASE I COMPLEXED WITH DEOXYNUCLEOSIDE TRIPHOSPHATE AND PYROPHOSPHATE
1KFSA:324-518DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
1KLNA:324-518DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
1KRPA:324-518DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
1KSPA:324-518DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
1QSLA:324-518KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION
2KFNA:324-518KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANESE
2KFZA:324-518KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND ZINC ONLY
2KZMA:324-518KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC AND MANGANESE
2KZZA:324-518KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC ONLY
(-)
Thermus aquaticus [TaxId: 271] (24)
1BGXT:290-422TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB
1JXEA:293-422STOFFEL FRAGMENT OF TAQ DNA POLYMERASE I
1KTQA:290-422DNA POLYMERASE
1QSSA:293-422DDGTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
1QSYA:293-422DDATP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
1QTMA:293-422DDTTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
1TAQA:290-422STRUCTURE OF TAQ DNA POLYMERASE
1TAUA:290-422TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX
2KTQA:295-422OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
3KTQA:293-422CRYSTAL STRUCTURE OF AN ACTIVE TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS
3M8RA:294-422CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH TRAPPED 4'-ETHYLATED DTTP
3M8SA:294-422CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH TRAPPED 4'-METHYLATED DTTP
3OJUA:294-422SNAPSHOT OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS PROCESSING C5 MODIFIED THYMIDIES
3RR7A:295-422BINARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE
3RR8A:293-422TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDGTP
3RRGA:294-422TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDGTP
3RRHA:295-422TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND A DDTTP
3RTVA:293-422CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH NATURAL PRIMER/TEMPLATE DNA
3T3FA:293-422TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO AN ABASIC SITE AND DNITP
4DF4A:294-422CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 7-(N-(10-HYDROXYDECANOYL)-AMINOPENTINYL)-7-DEAZA-2 -DATP
4DFPA:294-422CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQAUTICUS IN A TERNARY COMPLEX WITH 7-(AMINOPENTINYL)-7-DEAZA-DGTP
4DLGA:293-422TERNARY STRUCTURE OF THE LARGE FRAGMENT OF TAQ DNA POLYMERASE
4KTQA:294-422BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA
5KTQA:290-422LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO DCTP
(-)
Protein domain: Exonuclease domain of T7 DNA polymerase (17)
(-)
Bacteriophage T7 [TaxId: 10760] (17)
1SKRA:1-210T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE AND DDATP
1SKSA:1-210BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
1SKWA:1-210BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE
1SL0A:1-210; C:1-210TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
1SL1A:1-210BINARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE
1SL2A:1-210TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
1T7PA:1-210T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN
1T8EA:1-210T7 DNA POLYMERASE TERNARY COMPLEX WITH DCTP AT THE INSERTION SITE.
1TK0A:1-210T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DDCTP AT THE INSERTION SITE
1TK5A:1-210T7 DNA POLYMERASE BINARY COMPLEX WITH 8 OXO GUANOSINE IN THE TEMPLATING STRAND
1TK8A:1-210T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DAMP AT THE ELONGATION SITE
1TKDA:1-210T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE AND DCMP AT THE ELONGATION SITE
1X9MA:1-210T7 DNA POLYMERASE IN COMPLEX WITH AN N-2-ACETYLAMINOFLUORENE-ADDUCTED DNA
1X9SA:1-210T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-CTP AS THE INCOMING NUCLEOTIDE.
1X9WA:1-210T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE, CRYSTALLIZED WITH DIDEOXY-ATP AS THE INCOMING NUCLEOTIDE.
1ZYQA:1-210T7 DNA POLYMERASE IN COMPLEX WITH 8OG AND INCOMING DDATP
2AJQA:1-210; F:1-210STRUCTURE OF REPLICATIVE DNA POLYMERASE PROVIDES INSIGTS INTO THE MECHANISMS FOR PROCESSIVITY, FRAMESHIFTING AND EDITING
(-)
Protein domain: Exonuclease ERI1 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1W0HA:CRYSTALLOGRAPHIC STRUCTURE OF THE NUCLEASE DOMAIN OF 3'HEXO, A DEDDH FAMILY MEMBER, BOUND TO RAMP
(-)
Protein domain: Exonuclease I (4)
(-)
Escherichia coli K-12 [TaxId: 83333] (3)
2QXFA:PRODUCT BOUND STRUCTURE OF EXONUCLEASE I AT 1.5 ANGSTROM RESOLUTION
3HL8A:CRYSTAL STRUCTURE OF EXONUCLEASE I IN COMPLEX WITH INHIBITOR BCBP
3HP9A:CRYSTAL STRUCTURE OF SSB/EXONUCLEASE I IN COMPLEX WITH INHIBITOR CFAM
(-)
Escherichia coli [TaxId: 562] (1)
1FXXA:THE STRUCTURE OF EXONUCLEASE I SUGGESTS HOW PROCESSIVITY IS ACHIEVED
(-)
Protein domain: Exosome complex exonuclease RRP6 (4)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (4)
2HBJA:129-420STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDC DOMAIN
2HBKA:127-420STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDC DOMAIN; PROTEIN IN COMPLEX WITH MN
2HBLA:127-420STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDC DOMAIN; PROTEIN IN COMPLEX WITH MN, ZN, AND AMP
2HBMA:127-420STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDC DOMAIN; PROTEIN IN COMPLEX WITH MN, ZN, AND UMP
(-)
Protein domain: Hypothetical protein AT5G06450 (2)
(-)
Thale cress (Arabidopsis thaliana) [TaxId: 3702] (2)
1VK0A:; E:; F:; B:; C:; D:X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G06450
2Q3SA:; B:; C:; D:; E:; F:ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G06450
(-)
Protein domain: Interferon-stimulated gene 20 kDa protein, ISG20 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WLJA:HUMAN ISG20
(-)
Protein domain: N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III (2)
(-)
Escherichia coli [TaxId: 562] (2)
1J53A:STRUCTURE OF THE N-TERMINAL EXONUCLEASE DOMAIN OF THE EPSILON SUBUNIT OF E.COLI DNA POLYMERASE III AT PH 8.5
1J54A:STRUCTURE OF THE N-TERMINAL EXONUCLEASE DOMAIN OF THE EPSILON SUBUNIT OF E.COLI DNA POLYMERASE III AT PH 5.8
(-)
Protein domain: Oligoribonuclease (3)
(-)
Escherichia coli [TaxId: 562] (2)
1YTAA:1-180; B:; C:; D:CRYSTAL STRUCTURE OF OLIGORIBONUCLEASE, THE LONE ESSENTIAL EXORIBONUCLEASE IN ESCHERICHIA COLI
2IGIA:; B:CRYSTAL STRUCTURE OF E. COLI OLIGORIBONUCLEASE
(-)
Haemophilus influenzae [TaxId: 727] (1)
1J9AA:OLIGORIBONUCLEASE
(-)
Protein domain: Ribonuclease D, catalytic domain (1)
(-)
Escherichia coli [TaxId: 562] (1)
1YT3A:1-193CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE D, AN EXORIBONUCLEASE INVOLVED IN STRUCTURED RNA PROCESSING
(-)
Protein domain: Ribonuclease T (1)
(-)
Pseudomonas aeruginosa [TaxId: 287] (1)
2F96A:19-220; B:2.1 A CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA RNASE T (RIBONUCLEASE T)
(-)
Protein domain: Three prime repair exonuclease 1, TREX1 (6)
(-)
Mouse (Mus musculus) [TaxId: 10090] (6)
2IOCA:5-234THE CRYSTAL STRUCTURE OF TREX1 EXPLAINS THE 3' NUCLEOTIDE SPECIFICITY AND REVEALS A POLYPROLINE II HELIX FOR PROTEIN PARTENRING
2O4GA:9-234STRUCTURE OF TREX1 IN COMPLEX WITH A NUCLEOTIDE
2O4IA:9-234; B:9-234STRUCTURE OF TREX1 IN COMPLEX WITH DNA
3MXIA:; B:TREX1 3' EXONUCLEASE D18N FAMILIAL CHILBLAIN LUPUS MUTANT
3MXJA:; B:CRYSTAL STRUCTURE OF THE MTREX1 APOPROTEIN
3MXMA:; B:TREX1 3' EXONUCLEASE V201D AICARDI-GOUTIERES SYNDROME MUTANT
(-)
Protein domain: Three prime repair exonuclease 2, TREX2 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1Y97A:1-228; B:THE HUMAN TREX2 3' EXONUCLEASE STRUCTURE SUGGESTS A MECHANISM FOR EFFICIENT NON-PROCESSIVE DNA CATALYSIS
(-)
Family: Hermes transposase-like (1)
(-)
Protein domain: Transposase Hermes, catalytic domain (1)
(-)
House fly (Musca domestica) [TaxId: 7370] (1)
2BW3A:163-609THREE-DIMENSIONAL STRUCTURE OF THE HERMES DNA TRANSPOSASE
(-)
Family: Mitochondrial resolvase ydc2 catalytic domain (1)
(-)
Protein domain: Mitochondrial resolvase ydc2 catalytic domain (1)
(-)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (1)
1KCFA:39-256; B:39-256CRYSTAL STRUCTURE OF THE YEAST MITOCHONDRIAL HOLLIDAY JUNCTION RESOLVASE, YDC2
(-)
Family: mu transposase, core domain (2)
(-)
Protein domain: mu transposase, core domain (2)
(-)
Bacteriophage Mu [TaxId: 10677] (2)
1BCMA:257-480; B:258-480BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN WITH 2 MONOMERS PER ASYMMETRIC UNIT
1BCOA:258-480BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN
(-)
Family: PIWI domain (10)
(-)
Protein domain: Argonaute homologue Aq_1447 (2)
(-)
Aquifex aeolicus [TaxId: 63363] (2)
1YVUA:315-706CRYSTAL STRUCTURE OF A. AEOLICUS ARGONAUTE
2NUBA:315-706STRUCTURE OF AQUIFEX AEOLICUS ARGONUATE
(-)
Protein domain: Argonaute homologue PF0537 (3)
(-)
Pyrococcus furiosus [TaxId: 2261] (3)
1U04A:324-770CRYSTAL STRUCTURE OF FULL LENGTH ARGONAUTE FROM PYROCOCCUS FURIOSUS
1Z25A:324-770STRUCTURE OF P.FURIOSUS ARGONAUTE WITH BOUND MN2+
1Z26A:324-770STRUCTURE OF PYROCOCCUS FURIOSUS ARGONAUTE WITH BOUND TUNGSTATE
(-)
Protein domain: automated matches (2)
(-)
Aquifex aeolicus [TaxId: 63363] (2)
2F8SA:315-706; B:315-706CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA
2F8TA:315-706; B:315-706CRYSTAL STRUCTURE OF AA-AGO WITH EXTERNALLY-BOUND SIRNA
(-)
Protein domain: Hypothetical protein AF1318 (3)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (3)
1W9HA:93-408THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS.
1YTUA:93-408; B:93-408STRUCTURAL BASIS FOR 5'-END-SPECIFIC RECOGNITION OF THE GUIDE RNA STRAND BY THE A. FULGIDUS PIWI PROTEIN
2BGGA:93-408; B:93-408THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT SIRNA DUPLEX.
(-)
Family: Prp8 beta-finger domain-like (20)
(-)
Protein domain: automated matches (1)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
3SBTA:CRYSTAL STRUCTURE OF A AAR2-PRP8 COMPLEX
(-)
Protein domain: Pre-mRNA-splicing factor 8, Prp8 (19)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (5)
3E66A:1833-2087; B:CRYSTAL STRUCTURE OF THE BETA-FINGER DOMAIN OF YEAST PRP8
3E9OA:1835-2087CRYSTAL STRUCTURE OF YEAST PRP8, RESIDUES 1836-2092
3E9PA:; B:CRYSTAL STRUCTURE OF YEAST PRP8, RESIDUES 1827-2092
4ILGB:CRYSTAL STRUCTURE OF AAR2P IN COMPLEX WITH THE PRP8P RNASEH AND JAB1/MPN DOMAINS
4ILHA:CRYSTAL STRUCTURE OF AN AAR2P C-TERMINAL DELETION MUTANT IN CONPLEX WITH PRP8P RNASEH
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (1)
4ILJA:; B:CRYSTAL STRUCTURE OF AN PRP8P RNASEH W1911A MUTANT PROTEIN
(-)
Human (Homo sapiens) [TaxId: 9606] (13)
3E9LA:1760-2016CRYSTAL STRUCTURE OF HUMAN PRP8, RESIDUES 1755-2016
3ENBA:1771-1989; B:CRYSTAL STRUCTURE OF PRP8 CORE DOMAIN IV
4JK7A:; B:OPEN AND CLOSED FORMS OF WILD-TYPE HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JK8A:; B:OPEN AND CLOSED FORMS OF R1865A HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JK9A:; B:OPEN AND CLOSED FORMS OF WILD-TYPE HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND CO ION
4JKAA:; B:OPEN AND CLOSED FORMS OF R1865A HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND CO ION
4JKBA:; B:OPEN AND CLOSED FORMS OF V1788D HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKCA:; B:OPEN AND CLOSED FORMS OF T1800E HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKDA:; B:OPEN AND CLOSED FORMS OF I1790Y HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKEA:; B:OPEN AND CLOSED FORMS OF T1789P HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKFA:; B:OPEN AND CLOSED FORMS OF T1791P+R1865A HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKGA:; B:OPEN AND CLOSED FORMS OF MIXED T1789P+R1865A AND R1865A HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
4JKHA:; B:OPEN AND CLOSED FORMS OF D1781E HUMAN PRP8 RNASE H-LIKE DOMAIN WITH BOUND MG ION
(-)
Family: Putative Holliday junction resolvase RuvX (5)
(-)
Protein domain: Hypothetical protein YqgF (RuvX) (3)
(-)
Escherichia coli [TaxId: 562] (3)
1NMNA:; B:STRUCTURE OF YQGF FROM ESCHERICHIA COLI, A HYPOTHETICAL PROTEIN
1NU0A:; B:STRUCTURE OF THE DOUBLE MUTANT (L6M; F134M, SEMET FORM) OF YQGF FROM ESCHERICHIA COLI, A HYPOTHETICAL PROTEIN
1OVQA:SOLUTION STRUCTURE OF THE HYPOTHETICAL PROTEIN YQGF FROM ESCHERICHIA COLI
(-)
Protein domain: Hypothetical protein YrrK (RuvX) (1)
(-)
Bacillus subtilis [TaxId: 1423] (1)
1VHXA:; B:CRYSTAL STRUCTURE OF PUTATIVE HOLLIDAY JUNCTION RESOLVASE
(-)
Protein domain: Hypothetical protein, YqgF homologue (1)
(-)
Thermus thermophilus [TaxId: 274] (1)
1IV0A:SOLUTION STRUCTURE OF THE YQGF-FAMILY PROTEIN (N-TERMINAL FRAGMENT)
(-)
Family: Retroviral integrase, catalytic domain (152)
(-)
Protein domain: automated matches (90)
(-)
Human immunodeficiency virus 1 [TaxId: 11676] (61)
3LPTA:HIV INTEGRASE
3LPUA:HIV INTEGRASE
3NF6A:; B:STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
3NF7A:; B:STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
3NF8A:; B:STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
3NF9A:; B:STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
3NFAA:; B:STRUCTURAL BASIS FOR A NEW MECHANISM OF INHIBITION OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
4CE9A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEAA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEBA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CECA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEDA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEEA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEFA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEOA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEQA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CERA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CESA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CEZA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CF0A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CF1A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CF2A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CF8A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CF9A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CFAA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CFBA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CFCA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CFDA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGDA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGFA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGGA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGHA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGIA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CGJA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHNA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHOA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHPA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHQA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHYA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CHZA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CIEA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CIFA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CIGA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJ3A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJ4A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJ5A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJEA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJFA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJKA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJLA:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJPA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJQA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJRA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJSA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJTA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJUA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJVA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CJWA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CK1A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CK2A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
4CK3A:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
(-)
Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698] (3)
4DMNA:HIV-1 INTEGRASE CATALYTICAL CORE DOMAIN
4GVMA:HIV-1 INTEGRASE CATALYTIC CORE DOMAIN A128T MUTANT COMPLEXED WITH ALLOSTERIC INHIBITOR
4GW6A:HIV-1 INTEGRASE CATALYTIC CORE DOMAIN COMPLEXED WITH ALLOSTERIC INHIBITOR
(-)
Human immunodeficiency virus type 1 [TaxId: 11698] (4)
4E1MA:CRYSTAL STRUCTURE OF HIV-1 INTEGRASE WITH A NON-CATAYLTIC SITE INHIBITOR
4E1NA:CRYSTAL STRUCTURE OF HIV-1 INTEGRASE WITH A NON-CATAYLTIC SITE INHIBITOR
4ID1A:HIV-1 INTEGRASE CATALYTIC CORE DOMAIN COMPLEXED WITH ALLOSTERIC INHIBITOR
4JLHA:HIV-1 INTEGRASE CATALYTIC CORE DOMAIN A128T MUTANT COMPLEXED WITH ALLOSTERIC INHIBITOR
(-)
Human immunodeficiency virus [TaxId: 12721] (20)
3ZCMA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN.
3ZSOA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DESIGN
3ZSQA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSRA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSVA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSWA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSXA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSYA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZSZA:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZT0A:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZT1A:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZT2A:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZT3A:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
3ZT4A:; B:SMALL MOLECULE INHIBITORS OF THE LEDGF SITE OF HIV TYPE 1 INTEGRASE IDENTIFIED BY FRAGMENT SCREENING AND STRUCTURE BASED DRUG DESIGN
4AH9A:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
4AHRA:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
4AHSA:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
4AHTA:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
4AHUA:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
4AHVA:; B:PARALLEL SCREENING OF A LOW MOLECULAR WEIGHT COMPOUND LIBRARY: DO DIFFERENCES IN METHODOLOGY AFFECT HIT IDENTIFICATION
(-)
Rous sarcoma virus [TaxId: 11888] (2)
4FW1A:52-216; B:54-216CRYSTAL STRUCTURE OF TWO-DOMAIN RSV INTEGRASE COVALENTLY LINKED WITH DNA
4FW2A:52-216; B:54-216CRYSTAL STRUCTURE OF RSV THREE-DOMAIN INTEGRASE WITH DISORDERED N-TERMINAL DOMAIN
(-)
Protein domain: Retroviral integrase, catalytic domain (62)
(-)
Human immunodeficiency virus type 1 [TaxId: 11676] (38)
1B92A:MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
1B9DA:MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
1B9FA:MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY
1BHLA:CACODYLATED CATALYTIC DOMAIN OF HIV-1 INTEGRASE
1BI4A:; B:; C:CATALYTIC DOMAIN OF HIV-1 INTEGRASE
1BISA:; B:HIV-1 INTEGRASE CORE DOMAIN
1BIUA:; B:; C:HIV-1 INTEGRASE CORE DOMAIN COMPLEXED WITH MG++
1BIZA:; B:HIV-1 INTEGRASE CORE DOMAIN
1BL3A:; B:; C:CATALYTIC DOMAIN OF HIV-1 INTEGRASE
1EX4A:56-222; B:55-222HIV-1 INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAIN
1EXQA:; B:CRYSTAL STRUCTURE OF THE HIV-1 INTEGRASE CATALYTIC CORE DOMAIN
1HYVA:HIV INTEGRASE CORE DOMAIN COMPLEXED WITH TETRAPHENYL ARSONIUM
1HYZA:HIV INTEGRASE CORE DOMAIN COMPLEXED WITH A DERIVATIVE OF TETRAPHENYL ARSONIUM.
1ITGA:CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HIV-1 INTEGRASE: SIMILARITY TO OTHER POLYNUCLEOTIDYL TRANSFERASES
1K6YA:56-210; B:56-212; C:56-209; D:56-211CRYSTAL STRUCTURE OF A TWO-DOMAIN FRAGMENT OF HIV-1 INTEGRASE
1QS4A:; B:; C:CORE DOMAIN OF HIV-1 INTEGRASE COMPLEXED WITH MG++ AND 1-(5-CHLOROINDOL-3-YL)-3-HYDROXY-3-(2H-TETRAZOL-5-YL)-PROPENONE
2B4JA:; B:STRUCTURAL BASIS FOR THE RECOGNITION BETWEEN HIV-1 INTEGRASE AND LEDGF/P75
2ITGA:CATALYTIC DOMAIN OF HIV-1 INTEGRASE: ORDERED ACTIVE SITE IN THE F185H CONSTRUCT
3AO1A:; B:FRAGMENT-BASED APPROACH TO THE DESIGN OF LIGANDS TARGETING A NOVEL SITE IN HIV-1 INTEGRASE
3L3UA:; B:CRYSTAL STRUCTURE OF THE HIV-1 INTEGRASE CORE DOMAIN TO 1.4A
3L3VA:; B:STRUCTURE OF HIV-1 INTEGRASE CORE DOMAIN IN COMPLEX WITH SUCROSE
3OVNA:; B:FRAGMENT-BASED APPROACH TO THE DESIGN OF LIGANDS TARGETING A NOVEL SITE ON HIV-1 INTEGRASE
3VQ4A:; B:FRAGMENTS BOUND TO HIV-1 INTEGRASE
3VQ5A:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH N-METHYL-1-(4-METHYL-2-PHENYL-1, 3-THIAZOL-5-YL)METHANAMINE
3VQ6A:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH (1-METHYL-5-PHENYL-1H-PYRAZOL-4-YL)METHANOL
3VQ7A:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 4-(1H-PYRROL-1-YL)ANILINE
3VQ8A:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH (3R)-3,4-DIHYDRO-2H-CHROMEN-3-YLMETHANOL
3VQ9A:; B:; C:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 6-FLUORO-1,3-BENZOTHIAZOL-2-AMINE
3VQAA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 1-BENZOTHIOPHEN-6-AMINE 1,1-DIOXIDE
3VQBA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 6-FLUORO-4H-1,3-BENZODIOXINE-8-CARBOXYLIC ACID
3VQCA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH (5-METHYL-3-PHENYL-1,2-OXAZOL-4-YL)METHANOL
3VQDA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 5-METHYL-3-PHENYL-1,2-OXAZOLE-4-CARBOXYLIC ACID
3VQEA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH [1-(4-FLUOROPHENYL)-5-METHYL-1H-PYRAZOL-4-YL]METHANOL
3VQPA:; B:HIV-1 IN CORE DOMAIN IN COMPLEX WITH 2,3-DIHYDRO-1,4-BENZODIOXIN-5-YLMETHANOL
3VQQA:; B:HIV-1 INTEGRASE CORE DOMAIN IN COMPLEX WITH 2,1,3-BENZOTHIADIAZOL-4-AMINE
4LH4A:DUAL INHIBITION OF HIV-1 REPLICATION BY INTEGRASE-LEDGF ALLOSTERIC INHIBITORS IS PREDOMINANT AT POST-INTEGRATION STAGE DURING VIRUS PRODUCTION RATHER THAN AT INTEGRATION
4LH5A:DUAL INHIBITION OF HIV-1 REPLICATION BY INTEGRASE-LEDGF ALLOSTERIC INHIBITORS IS PREDOMINANT AT POST-INTEGRATION STAGE DURING VIRUS PRODUCTION RATHER THAN AT INTEGRATION
4OVLA:; B:INTERROGATING HIV INTEGRASE FOR COMPOUNDS THAT BIND- A SAMPL CHALLENGE
(-)
Rous sarcoma virus RSV [TaxId: 11886] (23)
1A5VA:ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3 AND MN CATION
1A5WA:ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3
1A5XA:ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3
1ASUA:AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5
1ASVA:AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN
1ASWA:AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, HEPES PH 7.5 USING SELENOMETHIONINE SUBSTITUTED PROTEIN; DATA COLLECTED AT-165 DEGREES C
1C0MA:49-216; B:54-216; C:49-216; D:54-216CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE
1C1AA:52-216; B:55-216CRYSTAL STRUCTURE OF RSV TWO-DOMAIN INTEGRASE
1CXQA:ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN FROM AMMONIUM SULFATE
1CXUA:1.42A RESOLUTION ASV INTEGRASE CORE DOMAIN FROM CITRATE
1CZ9A:ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN (D64N) FROM CITRATE
1CZBA:ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN FROM HEPES
1VSDA:ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM
1VSEA:ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, LOW MG CONCENTRATION FORM
1VSFA:ASV INTEGRASE CORE DOMAIN WITH MN(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM
1VSHA:ASV INTEGRASE CORE DOMAIN WITH ZN(II) COFACTORS
1VSIA:ASV INTEGRASE CORE DOMAIN WITH CA(II) COFACTOR
1VSJA:ASV INTEGRASE CORE DOMAIN WITH CD(II) COFACTORS
1VSKA:ASV INTEGRASE CORE DOMAIN D64N MUTATION IN CITRATE BUFFER PH 6.0
1VSLA:ASV INTEGRASE CORE DOMAIN D64N MUTATION WITH ZINC CATION
1VSMA:ASV INTEGRASE CORE DOMAIN IN CITRATE BUFFER PH 5.0
3O4NA:; B:CRYSTAL STRUCTURE OF THE ROUS ASSOCIATED VIRUS INTEGRASE CATALYTIC DOMAIN IN MES BUFFER PH 6.0
3O4QA:CRYSTAL STRUCTURE OF THE ROUS ASSOCIATED VIRUS INTEGRASE CATALYTIC DOMAIN A182T IN CITRATE BUFFER PH 6.2
(-)
Simian immunodeficiency virus [TaxId: 11723] (1)
1C6VA:; B:; C:; D:SIV INTEGRASE (CATALYTIC DOMAIN + DNA BIDING DOMAIN COMPRISING RESIDUES 50-293) MUTANT WITH PHE 185 REPLACED BY HIS (F185H)
(-)
Family: Ribonuclease H (190)
(-)
Protein domain: automated matches (16)
(-)
Bacillus halodurans [TaxId: 272558] (2)
1ZBIA:; B:BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N IN COMPLEX WITH 12-MER RNA/DNA HYBRID
1ZBLB:BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID
(-)
Escherichia coli K-12 [TaxId: 83333] (1)
3AA2A:A52I E. COLI RNASE HI
(-)
Escherichia coli [TaxId: 562] (4)
2Z1GA:CRYSTAL STRUCTURE OF E.COLI RNASE HI SURFACE CHARGED MUTANT(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K)
2Z1HA:CRYSTAL STRUCTURE OF E.COLI RNASE HI SURFACE CHARGED MUTANT(Q4R/T92K/Q105K/Q113R/Q115K/N143K/T145K)
2Z1IA:; B:CRYSTAL STRUCTURE OF E.COLI RNASE HI SURFACE CHARGED MUTANT(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K)
2Z1JA:CRYSTAL STRUCTURE OF E.COLI RNASE HI SURFACE CHARGED MUTANT(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K /T145K)
(-)
Human immunodeficiency virus 1, escherichia coli [TaxId: 11676] (1)
3HYFA:CRYSTAL STRUCTURE OF HIV-1 RNASE H P15 WITH ENGINEERED E. COLI LOOP AND ACTIVE SITE INHIBITOR
(-)
Shewanella oneidensis [TaxId: 70863] (1)
2ZQBA:; B:; C:; D:CRYSTAL STRUCTURE OF A PSYCHROTROPHIC RNASEHI VARIANT WITH SEXTUPLE THERMOSTABILIZING MUTATIONS
(-)
Thermococcus kodakarensis [TaxId: 69014] (3)
2DFEA:CRYSTAL STRUCTURE OF TK-RNASE HII(1-200)-C
2DFFA:CRYSTAL STRUCTURE OF TK-RNASE HII(1-204)-C
2DFHA:CRYSTAL STRUCTURE OF TK-RNASE HII(1-212)-C
(-)
Thermotoga maritima [TaxId: 2336] (4)
3O3FA:T. MARITIMA RNASE H2 D107N IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND MAGNESIUM IONS
3O3GA:T. MARITIMA RNASE H2 IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND CALCIUM IONS
3O3HA:T. MARITIMA RNASE H2 D107N IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND MANGANESE IONS
4HHTA:T. MARITIMA RNASE H2 G21S IN COMPLEX WITH NUCLEIC ACID SUBSTRATE AND CALCIUM IONS
(-)
Protein domain: BH0863-like Ribonuclease H (21)
(-)
Bacillus halodurans [TaxId: 86665] (19)
1ZBFA:62-193CRYSTAL STRUCTURE OF B. HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D132N
1ZBLA:62-193BACILLUS HALODURANS RNASE H CATALYTIC DOMAIN MUTANT D192N IN COMPLEX WITH 12-MER RNA/DNA HYBRID
2G8FA:61-193B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
2G8HA:B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
2G8IA:B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH MN2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
2G8KA:B. HALODURANS RNASE H CATALYTIC DOMAIN D192N MUTANT IN COMPLEX WITH CA2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
2G8UA:B. HALODURANS RNASE H CATALYTIC DOMAIN D132N MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (NON-P NICK AT THE ACTIVE SITE)
2G8VA:B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH MG2+ AND RNA/DNA HYBRID (REACTION PRODUCT)
2G8WA:B. HALODURANS RNASE H CATALYTIC DOMAIN E188A MUTANT IN COMPLEX WITH CA2+ AND RNA/DNA HYBRID
2R7YA:SELENIUM DERIVATIZED RNA/DNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN MUTANT D132N
3D0PA:62-193; C:62-193INSIGHTS INTO RNA/DNA HYBRID RECOGNITION AND PROCESSING BY RNASE H FROM THE CRYSTAL STRUCTURE OF A NON-SPECIFIC ENZYME-DSDNA COMPLEX
3EY1A:A CONFORMATIONAL TRANSITION IN THE STRUCTURE OF A 2'-THIOMETHYL-MODIFIED DNA VISUALIZED AT HIGH RESOLUTION
3I8DA:; C:THE PAIRING GEOMETRY OF THE HYDROPHOBIC THYMINE ANALOG 2,4-DIFLUOROTOLUENE IN DUPLEX DNA AS ANALYZED BY X-RAY CRYSTALLOGRAPHY
3TWHA:SELENIUM DERIVATIZED RNA/DNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN D132N MUTANT
3ULDA:HIGH RESOLUTION STRUCTURE OF DNA/RNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN D132N MUTANT
4HTUA:; B:STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIR
4HUEA:; B:STRUCTURE OF 5-CHLOROURACIL MODIFIED G:U BASE PAIR
4HUFA:; B:STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIR
4HUGA:; B:STRUCTURE OF 5-CHLOROURACIL MODIFIED A:U BASE PAIRS
(-)
Escherichia coli [TaxId: 562] (1)
2YV0X:STRUCTURAL AND THERMODYNAMIC ANALYSES OF E. COLI RIBONUCLEASE HI VARIANT WITH QUINTUPLE THERMOSTABILIZING MUTATIONS
(-)
Shewanella oneidensis [TaxId: 211586] (1)
2E4LA:THERMODYNAMIC AND STRUCTURAL ANALYSIS OF THERMOLABILE RNASE HI FROM SHEWANELLA ONEIDENSIS MR-1
(-)
Protein domain: Class II ribonuclease H (RNase HII) (7)
(-)
Archaeoglobus fulgidus [TaxId: 2234] (2)
1I39A:RNASE HII FROM ARCHAEOGLOBUS FULGIDUS
1I3AA:RNASE HII FROM ARCHAEOGLOBUS FULGIDUS WITH COBALT HEXAMMINE CHLORIDE
(-)
Methanococcus jannaschii [TaxId: 2190] (1)
1EKEA:; B:CRYSTAL STRUCTURE OF CLASS II RIBONUCLEASE H (RNASE HII) WITH MES LIGAND
(-)
Pyrococcus horikoshii [TaxId: 53953] (2)
1UAXA:; B:CRYSTAL STRUCTURE OF THE RIBONUCLEASE H2 FROM PYROCOCCUS HORIKOSHII OT3
1X1PA:1-196CRYSTAL STRUCTURE OF TK-RNASE HII(1-197)-A(28-42)
(-)
Thermococcus kodakaraensis [TaxId: 311400] (1)
1IO2A:CRYSTAL STRUCTURE OF TYPE 2 RIBONUCLEASE H FROM HYPERTHERMOPHILIC ARCHAEON, THERMOCOCCUS KODAKARAENSIS KOD1
(-)
Thermotoga maritima [TaxId: 2336] (1)
2ETJA:1-221CRYSTAL STRUCTURE OF RIBONUCLEASE HII (EC 3.1.26.4) (RNASE HII) (TM0915) FROM THERMOTOGA MARITIMA AT 1.74 A RESOLUTION
(-)
Protein domain: HIV RNase H (Domain of reverse transcriptase) (110)
(-)
Hiv-1 m:b_hxb2r [TaxId: 11706] (8)
3DLEA:430-538CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GF128590.
3DLGA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW564511.
3MECA:430-552HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC125
3MEEA:430-552HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC278
3QINA:CRYSTAL STRUCTURE OF HIV-1 RNASE H P15 WITH ENGINEERED E. COLI LOOP AND PYRIMIDINOL CARBOXYLIC ACID INHIBITOR
3QIOA:CRYSTAL STRUCTURE OF HIV-1 RNASE H WITH ENGINEERED E. COLI LOOP AND N-HYDROXY QUINAZOLINEDIONE INHIBITOR
3QIPA:430-556STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH AN RNASE H INHIBITOR AND NEVIRAPINE
4I7FA:430-552HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A PHOSPHONATE ANALOG OF NEVIRAPINE
(-)
Human immunodeficiency virus type 1 [TaxId: 11676] (101)
1BQMA:430-556HIV-1 RT/HBY 097
1BQNA:430-558TYR 188 LEU HIV-1 RT/HBY 097
1C0TA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BM+21.1326
1C0UA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BM+50.0934
1C1BA:430-543CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GCA-186
1C1CA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TNK-6123
1DLOA:430-556HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
1DTQA:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-1 (PETT131A94)
1DTTA:430-543CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-2 (PETT130A94)
1EETA:430-557HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITOR MSC204
1EP4A:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH S-1153
1FK9A:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DMP-266(EFAVIRENZ)
1FKOA:430-543CRYSTAL STRUCTURE OF NNRTI RESISTANT K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DMP-266(EFAVIRENZ)
1FKPA:430-542CRYSTAL STRUCTURE OF NNRTI RESISTANT K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1HMVA:430-554; C:430-554; E:430-554; G:430-554THE STRUCTURE OF UNLIGANDED REVERSE TRANSCRIPTASE FROM THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
1HNIA:430-558STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN A COMPLEX WITH THE NONNUCLEOSIDE INHIBITOR ALPHA-APA R 95845 AT 2.8 ANGSTROMS RESOLUTION
1HNVA:430-558STRUCTURE OF HIV-1 RT(SLASH)TIBO R 86183 COMPLEX REVEALS SIMILARITY IN THE BINDING OF DIVERSE NONNUCLEOSIDE INHIBITORS
1HPZA:430-556HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
1HQEA:430-554HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
1HQUA:430-556HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
1HRHA:432-556; B:432-554CRYSTAL STRUCTURE OF THE RIBONUCLEASE H DOMAIN OF HIV-1 REVERSE TRANSCRIPTASE
1HVUA:430-554; D:430-554; G:430-554; J:430-554HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE COMPLEXED WITH A 33-BASE NUCLEOTIDE RNA PSEUDOKNOT
1HYSA:430-553CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A POLYPURINE TRACT RNA:DNA
1IKVA:430-557K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH EFIVARENZ
1IKWA:430-557WILD TYPE HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH EFAVIRENZ
1IKXA:430-557K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITOR PNU142721
1IKYA:430-557HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH THE INHIBITOR MSC194
1J5OA:430-558CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMER
1JKHA:430-554CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DMP-266(EFAVIRENZ)
1JLAA:430-553CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TNK-651
1JLBA:430-554CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1JLCA:430-547CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-2
1JLEA:430-549CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSE TRANSCRIPTASE
1JLFA:430-539CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1JLGA:430-539CRYSTAL STRUCTURE OF Y188C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH UC-781
1JLQA:430-540CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 739W94
1KLMA:430-539HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH BHAP U-90152
1LW0A:430-537CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1LW2A:430-539CRYSTAL STRUCTURE OF T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 1051U91
1LWCA:430-537CRYSTAL STRUCTURE OF M184V MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1LWEA:430-554CRYSTAL STRUCTURE OF M41L/T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMN) IN COMPLEX WITH NEVIRAPINE
1LWFA:430-554CRYSTAL STRUCTURE OF A MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMQ+M184V: M41L/D67N/K70R/M184V/T215Y) IN COMPLEX WITH NEVIRAPINE
1N5YA:430-558HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO POST-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX P)
1N6QA:430-558HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO PRE-TRANSLOCATION AZTMP-TERMINATED DNA (COMPLEX N)
1O1WA:SOLUTION STRUCTURE OF THE RNASE H DOMAIN OF THE HIV-1 REVERSE TRANSCRIPTASE IN THE PRESENCE OF MAGNESIUM
1QE1A:430-556CRYSTAL STRUCTURE OF 3TC-RESISTANT M184I MUTANT OF HIV-1 REVERSE TRANSCRIPTASE
1R0AA:430-558CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COVALENTLY TETHERED TO DNA TEMPLATE-PRIMER SOLVED TO 2.8 ANGSTROMS
1RDHA:432-556; B:432-556CRYSTALLOGRAPHIC ANALYSES OF AN ACTIVE HIV-1 RIBONUCLEASE H DOMAIN SHOW STRUCTURAL FEATURES THAT DISTINGUISH IT FROM THE INACTIVE FORM
1REVA:430-539HIV-1 REVERSE TRANSCRIPTASE
1RT1A:430-539CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH MKC-442
1RT2A:430-543CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH TNK-651
1RT3A:430-537AZT DRUG RESISTANT HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH 1051U91
1RT4A:430-542HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC781
1RT5A:430-542HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC10
1RT6A:430-539HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC38
1RT7A:430-539HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC84
1RTDA:430-554; C:430-554STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE
1RTHA:430-543HIGH RESOLUTION STRUCTURES OF HIV-1 RT FROM FOUR RT-INHIBITOR COMPLEXES
1RTIA:430-543HIGH RESOLUTION STRUCTURES OF HIV-1 RT FROM FOUR RT-INHIBITOR COMPLEXES
1RTJA:430-543MECHANISM OF INHIBITION OF HIV-1 REVERSE TRANSCRIPTASE BY NON-NUCLEOSIDE INHIBITORS
1S1TA:430-539CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH UC-781
1S1UA:430-539CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1S1VA:430-539CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TNK-651
1S1WA:430-539CRYSTAL STRUCTURE OF V106A MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH UC-781
1S1XA:430-554CRYSTAL STRUCTURE OF V108I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
1S6PA:430-552CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943
1S6QA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R147681
1S9EA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R129385
1S9GA:430-543CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R120394.
1SUQA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R185545
1SV5A:430-552CRYSTAL STRUCTURE OF K103N MUTANT HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R165335
1T03A:430-558HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TENOFOVIR TERMINATED TEMPLATE-PRIMER (COMPLEX P)
1T05A:430-554HIV-1 REVERSE TRANSCRIPTASE CROSSLINKED TO TEMPLATE-PRIMER WITH TENOFOVIR-DIPHOSPHATE BOUND AS THE INCOMING NUCLEOTIDE SUBSTRATE
1TKTA:430-537CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW426318
1TKXA:430-537CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW490745
1TKZA:430-537CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW429576
1TL1A:430-537CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW451211
1TL3A:430-537CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW450557
1TV6A:430-539HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH CP-94,707
1TVRA:430-558HIV-1 RT/9-CL TIBO
1UWBA:430-558TYR 181 CYS HIV-1 RT/8-CL TIBO
1VRTA:430-539HIGH RESOLUTION STRUCTURES OF HIV-1 RT FROM FOUR RT-INHIBITOR COMPLEXES
1VRUA:430-539HIGH RESOLUTION STRUCTURES OF HIV-1 RT FROM FOUR RT-INHIBITOR COMPLEXES
2B5JA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R165481
2B6AA:430-558CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH THR-50
2BANA:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R157208
2BE2A:430-552CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH R221239
2HMIA:430-558HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX
2RKIA:430-557CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH A TRIAZOLE DERIVED NNRTI
2WONA:430-558CRYSTAL STRUCTURE OF UK-453061 BOUND TO HIV-1 REVERSE TRANSCRIPTASE (WILD-TYPE).
3DOLA:430-540CRYSTAL STRUCTURE OF L100I MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW695634.
3HVTA:430-556STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER
3ISNC:430-556CRYSTAL STRUCTURE OF HIV-1 RT BOUND TO A 6-VINYLPYRIMIDINE INHIBITOR
3ITHA:430-556; C:430-556CRYSTAL STRUCTURE OF THE HIV-1 REVERSE TRANSCRIPTASE BOUND TO A 6-VINYLPYRIMIDINE INHIBITOR
3K2PA:; B:HIV-1 REVERSE TRANSCRIPTASE ISOLATED RNASEH DOMAIN WITH THE INHIBITOR BETA-THUJAPLICINOL BOUND AT THE ACTIVE SITE
3LAKA:430-553CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH N1-HETEROCYCLE PYRIMIDINEDIONE NON-NUCLEOSIDE INHIBITOR
3LALA:430-553CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH N1-ETHYL PYRIMIDINEDIONE NON-NUCLEOSIDE INHIBITOR
3LAMA:430-553CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH N1-PROPYL PYRIMIDINEDIONE NON-NUCLEOSIDE INHIBITOR
3LANA:430-553CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH N1-BUTYL PYRIMIDINEDIONE NON-NUCLEOSIDE INHIBITOR
3LP3A:; B:P15 HIV RNASEH DOMAIN WITH INHIBITOR MK3
4JE2  [entry was replaced by entry 4QAG without any SCOP domain information]
(-)
Human immunodeficiency virus type 2 [TaxId: 11709] (1)
1MU2A:430-555CRYSTAL STRUCTURE OF HIV-2 REVERSE TRANSCRIPTASE
(-)
Protein domain: RNase H (RNase HI) (36)
(-)
Escherichia coli [TaxId: 562] (33)
1F21A:DIVALENT METAL COFACTOR BINDING IN THE KINETIC FOLDING TRAJECTORY OF E. COLI RIBONUCLEASE HI
1G15A:CO-CRYSTAL OF E. COLI RNASE HI WITH TWO MN2+ IONS BOUND IN THE THE ACTIVE SITE
1GOAA:COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
1GOBA:COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
1GOCA:COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
1JL1A:D10A E. COLI RIBONUCLEASE HI
1JXBA:I53A, A POINT MUTANT OF THE CYSTEINE-FREE VARIANT OF E. COLI RNASE HI
1KVAA:E. COLI RIBONUCLEASE HI D134A MUTANT
1KVBA:E. COLI RIBONUCLEASE HI D134H MUTANT
1KVCA:E. COLI RIBONUCLEASE HI D134N MUTANT
1LAVA:STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY CAVITY-FILLING MUTATIONS WITHIN A HYDROPHOBIC CORE
1LAWA:STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY CAVITY-FILLING MUTATIONS WITHIN A HYDROPHOBIC CORE
1RBRA:STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
1RBSA:STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
1RBTA:STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
1RBUA:STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
1RBVA:STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
1RCHA:SOLUTION NMR STRUCTURE OF RIBONUCLEASE HI FROM ESCHERICHIA COLI, 8 STRUCTURES
1RDAA:CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
1RDBA:CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
1RDCA:CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
1RDDA:CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE HI IN COMPLEX WITH MG2+ AT 2.8 ANGSTROMS RESOLUTION: PROOF FOR A SINGLE MG2+ SITE
1RNHA:STRUCTURE OF RIBONUCLEASE H PHASED AT 2 ANGSTROMS RESOLUTION BY MAD ANALYSIS OF THE SELENOMETHIONYL PROTEIN
1WSEA:1-155; B:CO-CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (E48A*) WITH MN2+
1WSFA:1-155; B:; C:; D:CO-CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (D134A*) WITH MN2+
1WSGA:1-155; B:; C:; D:CO-CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (E48A/D134N*) WITH MN2+
1WSHA:; B:; C:; D:CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (E48A/K87A)
1WSIA:; B:; C:; D:CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (E48A/K87A/D134N)
1WSJA:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF E.COLI RNASE HI ACTIVE SITE MUTANT (K87A/H124A)
2RN2A:STRUCTURAL DETAILS OF RIBONUCLEASE H FROM ESCHERICHIA COLI AS REFINED TO AN ATOMIC RESOLUTION
3AA3A:A52L E. COLI RNASE HI
3AA4A:A52V E.COLI RNASE HI
3AA5X:A52F E.COLI RNASE HI
(-)
Human spumaretrovirus [TaxId: 11963] (1)
2LSNA:SOLUTION STRUCTURE OF PFV RNASE H DOMAIN
(-)
synthetic, Escherichia coli/Thermus thermophilus chimera (1)
1JL2A:; B:; C:; D:CRYSTAL STRUCTURE OF TCEO RNASE H-A CHIMERA COMBINING THE FOLDING CORE FROM T. THERMOPHILUS RNASE H AND THE REMAINING REGION OF E. COLI RNASE H
(-)
Thermus thermophilus [TaxId: 274] (1)
1RILA:CRYSTAL STRUCTURE OF RIBONUCLEASE H FROM THERMUS THERMOPHILUS HB8 REFINED AT 2.8 ANGSTROMS RESOLUTION
(-)
Family: RuvC resolvase (1)
(-)
Protein domain: RuvC resolvase (1)
(-)
Escherichia coli [TaxId: 562] (1)
1HJRA:; B:; C:; D:ATOMIC STRUCTURE OF THE RUVC RESOLVASE: A HOLLIDAY JUNCTION-SPECIFIC ENDONUCLEASE FROM E. COLI
(-)
Family: Tex RuvX-like domain-like (3)
(-)
Protein domain: Transcriptional accessory factor Tex (3)
(-)
Pseudomonas aeruginosa [TaxId: 287] (3)
2OCEA:325-473CRYSTAL STRUCTURE OF TEX FAMILY PROTEIN PA5201 FROM PSEUDOMONAS AERUGINOSA
3BZCA:325-473CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM I
3BZKA:325-473CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM 2
(-)
Family: TM1739-like (1)
(-)
Protein domain: Hypothetical protein TM1739 (1)
(-)
Thermotoga maritima [TaxId: 2336] (1)
1ZUPA:1-301; B:CRYSTAL STRUCTURE OF A PUTATIVE NUCLEASE WITH A RIBONUCLEASE H-LIKE MOTIF FOLD (TM1739) FROM THERMOTOGA MARITIMA AT 2.20 A RESOLUTION
(-)
Family: Transposase inhibitor (Tn5 transposase) (6)
(-)
Protein domain: Transposase inhibitor (Tn5 transposase) (6)
(-)
Escherichia coli [TaxId: 562] (6)
1B7EA:TRANSPOSASE INHIBITOR
1MM8A:CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH ME DNA
1MUHA:CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH TRANSPOSON END DNA
1MUSA:CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH RESOLVED OUTSIDE END DNA
3ECPA:CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH 5' PHOSPHORYLATED TRANSPOSON END DNA
4DM0A:TN5 TRANSPOSASE: 20MER OUTSIDE END 2 MN COMPLEX