2BTO - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   STRUCTURE OF BTUBA FROM PROSTHECOBACTER DEJONGEII

Authors :   D. Schlieper, J. Lowe

Date :   04 Jun 05 (Deposition) - 23 Jun 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,T
Biol. Unit 1: A,B,T  (3x)

Keywords :   Bacterial Tubulin, Polymerization, Cytoskeleton, Protein Complex, Cytoskeletal Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Schlieper, M. A. Oliva, J. M. Andreu, J. Lowe
Structure Of Bacterial Tubulin Btuba/B: Evidence For Horizontal Gene Transfer.
Proc. Natl. Acad. Sci. Usa V. 102 9170 2005
PubMed-ID: 15967998 | Reference-DOI: 10.1073/PNAS.0502859102

Molecule 1 - TUBULIN BTUBA
	Atcc	:	27091
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET32(APDA10)
	Expression System Strain	:	C41(DE3)
	Expression System Taxid	:	562
	Organism Scientific	:	PROSTHECOBACTER DEJONGEII
	Organism Taxid	:	48465
	Other Details	:	GERMAN COLLECTION OF MICROORGANISMS (DSM 12251)

Molecule 2 - THIOREDOXIN 1
	Chains	:	T
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Synonym	:	TRX1, TRX

		1	2	3
Asymmetric Unit	:	A	B	T
Biological Unit 1 (3x)	:	A	B	T

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 2)

No.	Name	Count	Type	Full Name
1	GTP	2	Ligand/Ion	GUANOSINE-5'-TRIPHOSPHATE

Biological Unit 1 (1, 6)

No.	Name	Count	Type	Full Name
1	GTP	6	Ligand/Ion	GUANOSINE-5'-TRIPHOSPHATE

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:12 , GLN A:13 , ALA A:14 , GLN A:17 , ALA A:101 , GLY A:103 , ALA A:142 , GLY A:145 , GLY A:146 , THR A:147 , GLY A:148 , VAL A:173 , PRO A:175 , GLU A:185 , ASN A:208 , VAL A:226 , ASN A:230 , ILE A:233 , HOH A:2102 , HOH A:2103 , HOH A:2104 , HOH A:2105 , HOH A:2106 , HOH A:2107 , HOH A:2108 , ARG T:92	BINDING SITE FOR RESIDUE GTP A1433
2	AC2	SOFTWARE	GLY B:12 , GLN B:13 , ALA B:14 , GLN B:17 , GLY B:100 , ALA B:101 , GLY B:103 , ALA B:142 , GLY B:145 , GLY B:146 , THR B:147 , GLY B:148 , PRO B:175 , GLU B:185 , ASN B:208 , VAL B:226 , ASN B:230 , HOH B:2039	BINDING SITE FOR RESIDUE GTP B1433

Asymmetric Unit

No.	Residues
1	T:51	-	T:54

Asymmetric Unit

No.	Residues
1	Ala A:277	-	Pro A:278
2	Ala B:277	-	Pro B:278
3	Ile T:94	-	Pro T:95

(no "SAP(SNP)/Variant" information available for 2BTO)

Asymmetric Unit (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ECO57	25-43	1	T:43-61
				THIO_ECOL6	25-43	1	T:43-61
				THIO_ECOLI	25-43	1	T:43-61
				THIO_SALTI	25-43	1	T:43-61
				THIO_SALTY	25-43	1	T:43-61
				THIO_SHIFL	25-43	1	T:43-61

Biological Unit 1 (1, 18)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ECO57	25-43	3	T:43-61
				THIO_ECOL6	25-43	3	T:43-61
				THIO_ECOLI	25-43	3	T:43-61
				THIO_SALTI	25-43	3	T:43-61
				THIO_SALTY	25-43	3	T:43-61
				THIO_SHIFL	25-43	3	T:43-61

(no "Exon" information available for 2BTO)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:413
 aligned with Q8GCC5_9BACT | Q8GCC5 from UniProtKB/TrEMBL  Length:473

    Alignment length:430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432
         Q8GCC5_9BACT     3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFSGFLTVEITLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTYWIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEE 432
               SCOP domains d2btoa1 A:3-246 Tubulin alpha-subunit                                                                                                                                                                                                                     d2btoa2 A:253-432 Tubulin alpha     -subunit                                                                                                                                         SCOP domains
               CATH domains 2btoA01 A:3-272  [code=3.40.50.1440, no name defined]                                                                                                                                                                                                                         -----------     --------------------------------------    ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeehhhhhhhhhhhhhhhhhhhh................hhhh.eee....--..eee.eeeee..hhhhhhhhhhh....hhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeee...hhhhhhhhhhhhhhhhhh....eeeeeee.......eehhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh------..hhhhhhhhhh......eeeeeee......-----..hhhhhhhhhhhhhh.....hhhhh.eeeeeeeeee.----.hhhhhhhhhhh...........eeeeee........eeeeeeeee.hhhhhhhhhhhhhhhhhh...hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2bto A   3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGES--GSYVPRAIMVDLEPSVIDNVKATSGSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRF------EISLRELLTNLVPQPSLHFLMCAFAPLTPPD-----ELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGI----PLADAALAAMREKLPLTYWIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEE 432
                                    12        22        32        42        52      | 62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242   |     -|      262       272       282|     |292       302       312       322   |   332       342       352       362       372       382       392       402       412       422       432
                                                                                   59 62                                                                                                                                                                                     246    253                           283   289                                  326  331

Chain B from PDB  Type:PROTEIN  Length:423
 aligned with Q8GCC5_9BACT | Q8GCC5 from UniProtKB/TrEMBL  Length:473

    Alignment length:430
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432
         Q8GCC5_9BACT     3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFSGFLTVEITLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTYWIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEE 432
               SCOP domains d2btob1 B:3-246 Tubulin alpha-subunit                                                                                                                                                                                                               ------d2btob2 B:253-432 Tubulin alpha-subunit                                                                                                                                              SCOP domains
               CATH domains 2btoB01 B:3-272  [code=3.40.50.1440, no name defined]                                                                                                                                                                                                                         ---------------------------------------------------------------------------  ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeehhhhhhhhhhhhhhhhhhhh................hhhh.eeee......eeee.eeee...hhhhhhhhhhh....hhh.ee........hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeee...hhhhhhhhhhhhhhhhhhh...eeeeeee...-----.hhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhh......eeeeeee...hhhhh.....hhhhhhhhhhhhhh.....hhhhh.eeeeeeeeee...hhhhhhhhhhhhhh.....--....eeeeee........eeeeeeeee.hhhhhhhhhhhhhhhhhh...hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2bto B   3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSP-----VTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLT--IPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEE 432
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172    |    -|      192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342    |  352       362       372       382       392       402       412       422       432
                                                                                                                                                                                                        177   183                                                                                                                                                                 347  |                                                                                  
                                                                                                                                                                                                                                                                                                                                                                                     350

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_ECO57     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_ECOL6 | P0AA26 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_ECOL6     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE (4)
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_ECOLI | P0AA25 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_ECOLI     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE (5)
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_SALTI | P0AA29 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_SALTI     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_SALTY | P0AA28 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_SALTY     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Chain T from PDB  Type:PROTEIN  Length:103
 aligned with THIO_SHIFL | P0AA30 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:103
                                    14        24        34        44        54        64        74        84        94       104   
           THIO_SHIFL     5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 107
               SCOP domains d2btot_ T: Thioredoxin                                                                                  SCOP domains
               CATH domains 2btoT00 T:23-125 Glutaredoxin                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh..ee.eeeee....eeeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------THIOREDOXIN_1      ---------------------------------------------------------------- PROSITE (6)
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 2bto T  23 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 125
                                    32        42        52        62        72        82        92       102       112       122

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Prosthecobacter dejongeii. Organism_taxid: 48465. (1)

2btoT00

T:23-125

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.1440, no name defined] (23)

Prosthecobacter dejongeii. Organism_taxid: 48465. (2)

2a	2btoA01	A:3-272
2b	2btoB01	B:3-272

(no "Pfam Domain" information available for 2BTO)

Asymmetric Unit(hide GO term definitions)

Chain A,B (Q8GCC5_9BACT | Q8GCC5)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0003924	GTPase activity	Catalysis of the reaction: GTP + H2O = GDP + phosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005200	structural constituent of cytoskeleton	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
biological process
	GO:0007017	microtubule-based process	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
cellular component
	GO:0005874	microtubule	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.

Chain T (THIO_SALTI | P0AA29)

molecular function
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Chain T (THIO_SALTY | P0AA28)

molecular function
	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0034599	cellular response to oxidative stress	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006457	protein folding	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
	GO:0000103	sulfate assimilation	The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain T (THIO_ECO57 | P0AA27)

molecular function
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Chain T (THIO_ECOLI | P0AA25)

molecular function
	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0034599	cellular response to oxidative stress	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006457	protein folding	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
	GO:0000103	sulfate assimilation	The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain T (THIO_SHIFL | P0AA30)

molecular function
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Chain T (THIO_ECOL6 | P0AA26)

molecular function
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

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1f6m	CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THIOREDOXINREDUCTASE, THIOREDOXIN, AND THE NADP + ANALOG, AADP+
1keb	CRYSTAL STRUCTURE OF DOUBLE MUTANT M37L,P40S E.COLITHIOREDOXIN
1m7t	SOLUTION STRUCTURE AND DYNAMICS OF THE HUMAN -ESCHERICHIACOLI THIOREDOXIN CHIMERA: INSIGHTS INTO THERMODYNAMICSTABILITY
1oaz	IGE FV SPE7 COMPLEXED WITH A RECOMBINANT THIOREDOXIN
1skr	T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/ TEMPLATE AND DDATP
1sks	BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNAPRIMER/TEMPLATE CONTAINING A CIS- SYN THYMINE DIMER ON THETEMPLATE
1skw	BINARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNAPRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINEDIMER ON THE TEMPLATE
1sl0	TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNAPRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINEDIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
1sl1	BINARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNAPRIMER/TEMPLATE CONTAINING A CIS- SYN THYMINE DIMER ON THETEMPLATE
1sl2	TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNAPRIMER/TEMPLATE CONTAINING A CIS- SYN THYMINE DIMER ON THETEMPLATE AND AN INCOMING NUCLEOTIDE
1srx	THIOREDOXIN (OXIDIZED FORM)
1t7p	T7 DEOXYRIBONUCLEIC ACID POLYMERASE COMPLEXED TO DEOXYRIBONUCLEIC ACID PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN
1t8e	T7 DNA POLYMERASE TERNARY COMPLEX WITH DCTP AT THEINSERTION SITE.
1tho	THIOREDOXIN MUTANT WITH ARG INSERTED BETWEEN GLY 33 AND PRO 34 (33R34)
1tk0	T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE ANDDDCTP AT THE INSERTION SITE
1tk5	T7 DNA POLYMERASE BINARY COMPLEX WITH 8 OXO GUANOSINE INTHE TEMPLATING STRAND
1tk8	T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE ANDDAMP AT THE ELONGATION SITE
1tkd	T7 DNA POLYMERASE TERNARY COMPLEX WITH 8 OXO GUANOSINE ANDDCMP AT THE ELONGATION SITE
1txx	ACTIVE-SITE VARIANT OF E.COLI THIOREDOXIN
1x9m	T7 DNA POLYMERASE IN COMPLEX WITH AN N-2 -ACETYLAMINOFLUORENE-ADDUCTED DNA
1x9s	T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER /TEMPLATE DNACONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE,CRYSTALLIZED WITH DIDEOXY-CTP AS THE INCOMING NUCLEOTIDE
1x9w	T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER /TEMPLATE DNACONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATE,CRYSTALLIZED WITH DIDEOXY-ATP AS THE INCOMING NUCLEOTIDE
1xoa	THIOREDOXIN (OXIDIZED DISULFIDE FORM), NMR, 20 STRUCTURES
1xob	THIOREDOXIN (REDUCED DITHIO FORM), NMR, 20 STRUCTURES
2btq	STRUCTURE OF BTUBAB HETERODIMER FROM PROSTHECOBACTER DEJONGEII
2tir	THIOREDOXIN MUTANT WITH LYS 36 REPLACED BY GLU (K36E)
2trx	THIOREDOXIN

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 2)

Sites (2, 2)

SS Bonds (1, 1)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (3, 5)

CATH Domains (2, 3)

Pfam Domains (0, 0)

Gene Ontology (19, 46)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File