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(-) Description

Title :  1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR IN-CELL GB1
 
Authors :  T. Ikeya, T. Hanashima, S. Hosoya, M. Shimazaki, S. Ikeda, M. Mishima, P. Guentert, Y. Ito
Date :  30 Nov 15  (Deposition) - 28 Dec 16  (Release) - 28 Dec 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  In-Cell Nmr, Qme Data Processing, Flya Automatic Assignment, Bayesian, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Ikeya, T. Hanashima, S. Hosoya, M. Shimazaki, S. Ikeda, M. Mishima, P. Guentert, Y. Ito
Improved In-Cell Structure Determination Of Proteins At Near-Physiological Concentration
Sci Rep V. 6 38312 2016
PubMed-ID: 27910948  |  Reference-DOI: 10.1038/SREP38312

(-) Compounds

Molecule 1 - IMMUNOGLOBULIN G-BINDING PROTEIN G
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET47B
    Expression System Vector Type: VECTOR
    Fragment: UNP RESIDUES 303-357
    Gene: SPG
    Organism Scientific: STREPTOCOCCUS SP. 'GROUP G'
    Organism Taxid: 1320
    Synonym: IGG-BINDING PROTEIN G

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N9L)

(-) Sites  (0, 0)

(no "Site" information available for 2N9L)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N9L)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N9L)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N9L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N9L)

(-) Exons   (0, 0)

(no "Exon" information available for 2N9L)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:57
                                                                                        
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhh...eeeee....eeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                  2n9l A  1 MGTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE 57
                                    10        20        30        40        50
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N9L)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N9L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N9L)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)

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  2n9l
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  SPG2_STRSG | P19909
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPG2_STRSG | P19909: 1fcc 1fcl 1fd6 1gb4 1gjs 1gjt 1ibx 1p7e 1p7f 1qkz 1uwx 1zxh 2gi9 2i2y 2i38 2igg 2jsv 2ju6 2khu 2khw 2kn4 2kq4 2kwd 2lum 2n9k 2oed 2on8 2onq 2plp 2qmt 3fil 3ui3 3v3x 4oza 4ozb 4ozc 4wh4 5bmg 5bmh 5bmi 5hfy 5hg2 5hi1

(-) Related Entries Specified in the PDB File

2n9k RELATED ID: 25910 RELATED DB: BMRB