5HEZ - JenaLib

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Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Title :   JAK2 KINASE (JH1 DOMAIN) MUTANT P1057A IN COMPLEX WITH TG101209

Authors :   M. Ultsch, C. Eigenbrot

Date :   06 Jan 16 (Deposition) - 09 Nov 16 (Release) - 16 Nov 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.66

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: A,B,C,D  (2x)

Keywords :   Protein Kinase, Inhibitor, Mutation, Tyk2, Surrogate, P1104A, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. A. Dendrou, A. Cortes, L. Shipman, H. G. Evans, K. E. Attfield, L. Jostins, T. Barber, G. Kaur, S. B. Kuttikkatte, O. A. Leach, C. Desel S. L. Faergeman, J. Cheeseman, M. J. Neville, S. Sawcer, A. Compston, A. R. Johnson, C. Everett, J. I. Bell, F. Karpe, M. Ultsch, C. Eigenbrot G. Mcvean, L. Fugger
Resolving Tyk2 Locus Genotype-To-Phenotype Differences In Autoimmunity.
Sci Transl Med V. 8 Ra149 2016
PubMed-ID: 27807284 | Reference-DOI: 10.1126/SCITRANSLMED.AAG1974

Molecule 1 - TYROSINE-PROTEIN KINASE JAK2
	Chains	:	A, B, C, D
	EC Number	:	2.7.10.2
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Taxid	:	7108
	Gene	:	JAK2
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	JANUS KINASE 2,JAK-2

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (2x)	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 21)

No.	Name	Count	Type	Full Name
1	1M3	8	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	3	Ligand/Ion	CHLORIDE ION
3	PTR	8	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	2	Ligand/Ion	ZINC ION

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	1M3	2	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	PTR	2	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (2, 4)

No.	Name	Count	Type	Full Name
1	1M3	2	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	PTR	2	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 3 (2, 4)

No.	Name	Count	Type	Full Name
1	1M3	2	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	PTR	2	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 4 (2, 4)

No.	Name	Count	Type	Full Name
1	1M3	2	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	PTR	2	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 5 (2, 32)

No.	Name	Count	Type	Full Name
1	1M3	16	Ligand/Ion	N-TERT-BUTYL-3-[(5-METHYL-2-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]BENZENESULFONAMIDE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	PTR	16	Mod. Amino Acid	O-PHOSPHOTYROSINE
4	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LYS A:1083 , 1M3 C:1202	binding site for residue CL A 1201
02	AC2	SOFTWARE	HIS A:886 , HIS A:891 , HIS D:886 , HIS D:891	binding site for residue ZN A 1202
03	AC3	SOFTWARE	PHE A:1019 , TRP A:1020 , TYR A:1021 , LEU A:1026 , TRP A:1038 , GLY A:1086 , ARG A:1087 , MET C:1064 , LEU C:1082 , LYS C:1083	binding site for residue 1M3 A 1203
04	AC4	SOFTWARE	LEU A:855 , VAL A:863 , ALA A:880 , GLU A:930 , LEU A:932 , GLY A:935 , ARG A:980 , ASN A:981 , LEU A:983 , ASP A:994 , ARG B:847	binding site for residue 1M3 A 1204
05	AC5	SOFTWARE	LYS B:1083 , 1M3 D:1202	binding site for residue CL B 1201
06	AC6	SOFTWARE	PHE B:1019 , TRP B:1020 , TYR B:1021 , LEU B:1026 , TRP B:1038 , LEU B:1078 , LEU B:1081 , GLY B:1086 , LEU D:1082 , LYS D:1083 , CL D:1201	binding site for residue 1M3 B 1202
07	AC7	SOFTWARE	ARG A:847 , LEU B:855 , GLY B:856 , LYS B:857 , VAL B:863 , ALA B:880 , GLU B:930 , LEU B:932 , GLY B:935 , ARG B:980 , LEU B:983 , ASP B:994	binding site for residue 1M3 B 1203
08	AC8	SOFTWARE	HIS B:886 , HIS B:891 , HIS C:886 , HIS C:891	binding site for residue ZN B 1204
09	AC9	SOFTWARE	LEU C:855 , GLY C:856 , GLY C:858 , VAL C:863 , ALA C:880 , MET C:929 , GLU C:930 , LEU C:932 , GLY C:935 , ARG C:980 , LEU C:983 , ASP C:994 , HOH C:1308 , ARG D:847	binding site for residue 1M3 C 1201
10	AD1	SOFTWARE	MET A:1064 , ILE A:1079 , LEU A:1082 , CL A:1201 , PHE C:1019 , TRP C:1020 , TYR C:1021 , TRP C:1038 , LEU C:1081 , GLY C:1086	binding site for residue 1M3 C 1202
11	AD2	SOFTWARE	1M3 B:1202 , LYS D:1083	binding site for residue CL D 1201
12	AD3	SOFTWARE	MET B:1064 , LEU B:1082 , CL B:1201 , PHE D:1019 , TRP D:1020 , TYR D:1021 , PRO D:1023 , TRP D:1038 , LEU D:1078 , LEU D:1081 , GLY D:1086	binding site for residue 1M3 D 1202
13	AD4	SOFTWARE	ARG C:847 , LEU D:855 , GLY D:856 , VAL D:863 , ALA D:880 , GLU D:930 , LEU D:932 , GLY D:935 , ASN D:981 , LEU D:983 , ASP D:994	binding site for residue 1M3 D 1203

(no "SS Bond" information available for 5HEZ)

(no "Cis Peptide Bond" information available for 5HEZ)

(no "SAP(SNP)/Variant" information available for 5HEZ)

(no "PROSITE Motif" information available for 5HEZ)

(no "Exon" information available for 5HEZ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:289
                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeee...eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhh........eeeee......eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee........eeeee..eeee......ee.......ee............hhhhhhhheehhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hez A  842 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSARNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEyyKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSAPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 1132
                                   851       861       871       881       891       901       911       923       933       943       953       963       973       983       993      1003   || 1013      1023      1033      1043      1053      1063      1073      1083      1093      1103      1113      1123         
                                                                                                        920|                                                                                1007-PTR                                                                                                                         
                                                                                                         923                                                                                 1008-PTR

Chain B from PDB  Type:PROTEIN  Length:291
                                                                                                                                                                                                                                                                                                                                    
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeee...eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhh........eeeee........eeeee.....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee........eeeee..eeee......ee.......ee............hhhhhhh.eehhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhh..........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hez B  842 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEyyKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSAPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 1132
                                   851       861       871       881       891       901       911       921       931       941       951       961       971       981       991      1001     |1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131 
                                                                                                                                                                                              1007-PTR                                                                                                                         
                                                                                                                                                                                               1008-PTR

Chain C from PDB  Type:PROTEIN  Length:291
                                                                                                                                                                                                                                                                                                                                    
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeee...eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhh........eeeeee......eeeeee.....hhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.ee........eeeee..eeee......ee.......ee............hhhhhhh.eehhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hez C  842 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEyyKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSAPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 1132
                                   851       861       871       881       891       901       911       921       931       941       951       961       971       981       991      1001     |1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131 
                                                                                                                                                                                              1007-PTR                                                                                                                         
                                                                                                                                                                                               1008-PTR

Chain D from PDB  Type:PROTEIN  Length:291
                                                                                                                                                                                                                                                                                                                                    
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeee...eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhh........eeeee........eeeee.....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee........eeeee..eeee......ee.......ee............hhhhhhh.eehhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.....hhhhhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hez D  842 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEyyKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSAPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 1132
                                   851       861       871       881       891       901       911       921       931       941       951       961       971       981       991      1001     |1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131 
                                                                                                                                                                                              1007-PTR                                                                                                                         
                                                                                                                                                                                               1008-PTR

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4ji9	4JI9 IS THE SAME LIGAND WITH WILD-TYPE PROTEIN

Description

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Ligands, Modified Residues, Ions (4, 21)

Sites (13, 13)

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