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(-) Description

Title :  CRYSTAL STRUCTURE OF AMINO ACIDS 1590-1657 OF MYH7
 
Authors :  N. E. Korkmaz, K. C. Taylor, M. P. Andreas, G. Ajay, N. T. Heinz, Q. Cui, I.
Date :  10 Jul 15  (Deposition) - 02 Dec 15  (Release) - 27 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  A,B  (1x)
Keywords :  Myosin, Coiled-Coil, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. N. Korkmaz, K. C. Taylor, M. P. Andreas, G. Ajay, N. T. Heinze, Q. Cui, I. Rayment
A Composite Approach Towards A Complete Model Of The Myosin Rod.
Proteins V. 84 172 2016
PubMed-ID: 26573747  |  Reference-DOI: 10.1002/PROT.24964

(-) Compounds

Molecule 1 - XRCC4-MYH7-1590-1657
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP Q13426 RESIDUES 2-143, UNP P12833 1590-1657
    Gene: XRCC4, MYH7, MYHCB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 4,MYOSIN HEAVY CHAIN 7,MYOSIN HEAVY CHAIN SLOW ISOFORM,MYHC-SLOW,MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM,MYHC-BETA

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB
Biological Unit 2 (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 32)

Asymmetric Unit (1, 32)
No.NameCountTypeFull Name
1MLY32Mod. Amino AcidN-DIMETHYL-LYSINE
Biological Unit 1 (1, 32)
No.NameCountTypeFull Name
1MLY32Mod. Amino AcidN-DIMETHYL-LYSINE
Biological Unit 2 (1, 32)
No.NameCountTypeFull Name
1MLY32Mod. Amino AcidN-DIMETHYL-LYSINE

(-) Sites  (0, 0)

(no "Site" information available for 5CHX)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CHX)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5CHX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CHX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5CHX)

(-) Exons   (0, 0)

(no "Exon" information available for 5CHX)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeeeeee..hhh.eeeeeee....eeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhh......eeeeee....eeeeeee....eeeeeeee.ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5chx A    0 SGERkISRIHLVSEPSITHFLQVSWEkTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEkGkYVGELRkALLSGAGDVYTFNFSkESCYFFFEkNLkDVSFRLGSFNLEkVENPAEVIRELICYCLDTTAENQAkNEHHLRVVDSLQTSLDAETRSRNEALRVkkkMEGDLNEMEIQLSHANRMAAEAQkQVkSLQSLLkDTQIQL 1657
                                |    9        19      | 29        39        49        59   | |  69  |     79|       91       101|      111   |   121       131       141 ||   1597      1607      1617      1627      1637   |  1647   |  1657
                                |                    26-MLY                               63-MLY   72-MLY 79|      90-MLY   99-MLY         115-MLY                  140-MLY                     1615-MLY                  1641-MLY     |      
                                4-MLY                                                       65-MLY         82                 102-MLY                                  143|                      1616-MLY                    1644-MLY  |      
                                                                                                                                                                       1590                       1617-MLY                          1651-MLY  


Chain B from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee..eeeeeeeeeeee..hhh.eeeeeee....eeeeeeehhhhhhhhhhh..hhhhhhhhhhhhhh.....eeeeee....eeeeeee....eeeeeeee.ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5chx B    0 SGERkISRIHLVSEPSITHFLQVSWEkTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEkGkYVGELRkALLSGAGVYTFNFSkESCYFFFEkNLkDVSFRLGSFNLEkVENPAEVIRELICYCLDTTAENQAkNEHHLRVVDSLQTSLDAETRSRNEALRVkkkMEGDLNEMEIQLSHANRMAAEAQkQVkSLQSLLkDTQIQL 1657
                                |    9        19      | 29        39        49        59   | |  69  |     79|      |92      |102       112  |    122       132       142||    1598      1608      1618      1628      1638  |  |1648  |      
                                4-MLY                26-MLY                               63-MLY   72-MLY 79|     90-MLY   99-MLY         115-MLY                  140-MLY                     1615-MLY                  1641-MLY     |      
                                                                                            65-MLY         83                102-MLY                                  143|                      1616-MLY                    1644-MLY  |      
                                                                                                                                                                      1590                       1617-MLY                          1651-MLY
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CHX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CHX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5CHX)

(-) Gene Ontology  (55, 56)

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  XRCC4_HUMAN | Q13426
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MYH7_HUMAN | P12883: 1ik2 2fxm 2fxo 3dtp 4db1 4p7h 4pa0 4xa1 4xa3 4xa4 4xa6 5cj0 5cj1 5cj4 5tby
        XRCC4_HUMAN | Q13426: 1fu1 1ik9 3ii6 3mud 3q4f 3rwr 3sr2 3w03 4xa4 5cj0 5cj4 5e50

(-) Related Entries Specified in the PDB File

5cj0 5cj1 5cj4