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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
 
Authors :  L. Alamo, J. S. Ware, A. Pinto, R. E. Gillilan, J. G. Seidman, C. E. Seidma R. Padron
Date :  13 Sep 16  (Deposition) - 07 Jun 17  (Release) - 28 Jun 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  20.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Contractile Protein Hypertrophic Or Dilated Cardiomyopathy Beta- Cardiac Myosin Ii Myosin Interacting-Heads Motif, Contractile Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Alamo, J. S. Ware, A. Pinto, R. E. Gillilan, J. G. Seidman, C. E. Seidman, R. Padron
Effects Of Myosin Variants On Interacting-Heads Motif Explain Distinct Hypertrophic And Dilated Cardiomyopathy Phenotypes.
Elife V. 6 2017
PubMed-ID: 28606303  |  Reference-DOI: 10.7554/ELIFE.24634
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MYOSIN-7
    Chains: A, B
    Fragment: SUBFRAGMENT 1(S1)
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: MYOSIN 2 HEAVY CHAIN, VENTRICULAR CARDIAC MUSCLE, FREE HEAD HOMOLOGY MODEL OF HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF
    Synonym: MYOSIN HEAVY CHAIN 7,MYOSIN HEAVY CHAIN SLOW ISOFORM,MYHC- SLOW,MYOSIN HEAVY CHAIN,CARDIAC MUSCLE BETA ISOFORM,MYHC-BETA
 
Molecule 2 - MYOSIN LIGHT CHAIN 3
    Chains: C, D
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: MYOSIN 2 ESSENTIAL LIGHT CHAIN, VENTRICULAR CARDIAC MUSCLE, FREE (CHAIN C) AND BLOCKED (CHAIN D) HEAD HOMOLOGY MODEL OF HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF
    Synonym: CARDIAC MYOSIN LIGHT CHAIN 1,CMLC1,MYOSIN LIGHT CHAIN 1, SLOW-TWITCH MUSCLE B/VENTRICULAR ISOFORM,MLC1SB,VENTRICULAR MYOSIN ALKALI LIGHT CHAIN,VENTRICULAR MYOSIN LIGHT CHAIN 1,VLCL, VENTRICULAR/SLOW TWITCH MYOSIN ALKALI LIGHT CHAIN,MLC-LV/SB
 
Molecule 3 - MYOSIN REGULATORY LIGHT CHAIN 2, VENTRICULAR/CARDIAC MUSCLE ISOFORM
    Chains: E, F
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: MYOSIN 2 REGULATORY LIGHT CHAIN, VENTRICULAR CARDIAC MUSCLE, FREE (CHAIN E) AND BLOCKED (CHAIN F) HEAD HOMOLOGY MODEL OF HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF
    Synonym: MLC-2V,CARDIAC MYOSIN LIGHT CHAIN 2,MYOSIN LIGHT CHAIN 2, SLOW SKELETAL/VENTRICULAR MUSCLE ISOFORM,MLC-2S/V,VENTRICULAR MYOSIN LIGHT CHAIN 2

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5TBY)

(-) Sites  (0, 0)

(no "Site" information available for 5TBY)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5TBY)

(-) Cis Peptide Bonds  (22, 22)

Asymmetric/Biological Unit
No.Residues
1Gln A:209 -Ser A:210
2Ser A:271 -Arg A:272
3Gly A:316 -Glu A:317
4Lys A:363 -Phe A:364
5Leu A:366 -Lys A:367
6Glu A:370 -Glu A:371
7Gly A:425 -Ala A:426
8Gln A:454 -Tyr A:455
9Phe A:735 -Ile A:736
10Ile A:784 -Ile A:785
11Leu B:33 -Lys B:34
12Lys B:213 -Gly B:214
13Met B:531 -Ser B:532
14Lys B:635 -Gly B:636
15Ala B:638 -Lys B:639
16Lys B:639 -Lys B:640
17Cys C:67 -Glu C:68
18Gly C:175 -Gln C:176
19Gly D:175 -Gln D:176
20Asn D:180 -Gly D:181
21Glu E:109 -Gly E:110
22Glu E:164 -Lys E:165

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5TBY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5TBY)

(-) Exons   (0, 0)

(no "Exon" information available for 5TBY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:954
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhh........hhhhh......eeeeee...eeeeeee......eeeeee....eeeee....ee..........hhhhh...hhhhhhhhhhhhhhh....eee..eeeee.........hhhhhhhhh..hhhhh..hhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh...............eeeeeee.....eeeeeee..................hhhhhhhhhh.hhhhhhhh.........................hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.....................hhhhhhhhh.....hhhhhh..eeee..eeee...hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.......ee.eee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......................hhhhhhhhhh.....hhhhhhhhhhhh.......ee...........eeeee....eeeee..hhhhhh........hhhhhh..hhhhhhhh........................hhhhhhhhhhhhhhhhhhh.eeeeeeee...........hhhhhhhhhhhhhhhhhhhhhhhh..eee..hhhhhhh...hhhhh......hhhhhhhhhhhhh......eee....eee...hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tby A   6 MAVFGAAAPYLRKSEKERLEAQTRPFDLKKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRGVLARMEYKKLLERRDSLLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLEL 959
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825       835       845       855       865       875       885       895       905       915       925       935       945       955    


Chain B from PDB  Type:PROTEIN  Length:950
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhh...eeeee.....eeeeeeeeee..eeee.......eeee.hhhee..hhhhh...........hhhhhhhhhhhhhhh...ee.....eeee...........hhhhhh...........hhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhee.......ee.eeeeeeeee.....eeeeeeeeeee.hhhhh.........hhhhhhhhhhhhhhhhhh........................hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhh.hhhhhhhhh...eeee..eeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhh..hhhhhh......hhhhhhhhhhhhh......ee...........eeee........ee..hhhhhh....hhhhhhhhhh...hhhhhh.........................hhhhhhhhhhhhhhhhhhh....eeeee...........hhhhhhhhhhhhhhhhhhhhh.....eeeehhhhhhhhhhhh..............hhhhhhhh...hhh.ee....eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tby B  10 GAAAPYLRKSEKERLEAQTRPFDLKKDVFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRGVLARMEYKKLLERRDSLLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLEL 959
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959


Chain C from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh.......eee.hhhhhhhhhh....hhhhhhhhh...........eeehhhhhhhhhhhhhh....hhhhhhhhhh........eeehhhhhhhhhhh....hhhhhhhhh........eeehhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tby C  44 IEFTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS 195
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  


Chain D from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh........ee..hhhhhhhhhh...hhhhhhhh............eehhhhhhhhhhhhh.......hhhhhhhhhh.......eeehhhhhhhhhhh....hhhhhhhhh........eeehhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tby D  44 IEFTPEQIEEFKEAFMLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMSS 195
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193  


Chain E from PDB  Type:PROTEIN  Length:160
                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........................hhhhhh.......hhhhhhhhhhhhh....hhhhhhhhhhhh....hhhhhhhhhhh......hhhhhhh.hhhhh......eehhhhhhhhh......hhhhhhhhhhh..ee..eehhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tby E   7 KKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD 166
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166


Chain F from PDB  Type:PROTEIN  Length:160
                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................hhhhhhhhhh...........hhhhhhhhh.....hhhhhhhhh.......hhhhhhhhhhhhhhh..hhhhhhhhhhh.........hhhhhhhhhhhh....hhhhhhhhhhhh.......hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tby F   7 KKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD 166
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5TBY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5TBY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5TBY)

(-) Gene Ontology  (55, 78)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala B:638 - Lys B:639   [ RasMol ]  
    Asn D:180 - Gly D:181   [ RasMol ]  
    Cys C:67 - Glu C:68   [ RasMol ]  
    Gln A:209 - Ser A:210   [ RasMol ]  
    Gln A:454 - Tyr A:455   [ RasMol ]  
    Glu A:370 - Glu A:371   [ RasMol ]  
    Glu E:109 - Gly E:110   [ RasMol ]  
    Glu E:164 - Lys E:165   [ RasMol ]  
    Gly A:316 - Glu A:317   [ RasMol ]  
    Gly A:425 - Ala A:426   [ RasMol ]  
    Gly C:175 - Gln C:176   [ RasMol ]  
    Gly D:175 - Gln D:176   [ RasMol ]  
    Ile A:784 - Ile A:785   [ RasMol ]  
    Leu A:366 - Lys A:367   [ RasMol ]  
    Leu B:33 - Lys B:34   [ RasMol ]  
    Lys A:363 - Phe A:364   [ RasMol ]  
    Lys B:213 - Gly B:214   [ RasMol ]  
    Lys B:635 - Gly B:636   [ RasMol ]  
    Lys B:639 - Lys B:640   [ RasMol ]  
    Met B:531 - Ser B:532   [ RasMol ]  
    Phe A:735 - Ile A:736   [ RasMol ]  
    Ser A:271 - Arg A:272   [ RasMol ]  
 

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  5tby
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  MLRV_HUMAN | P10916
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  MYH7_HUMAN | P12883
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  MYL3_HUMAN | P08590
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MYH7_HUMAN | P12883: 1ik2 2fxm 2fxo 3dtp 4db1 4p7h 4pa0 4xa1 4xa3 4xa4 4xa6 5chx 5cj0 5cj1 5cj4

(-) Related Entries Specified in the PDB File

3jbh TWO INTERACTING-HEADS MOTIFS FLEXIBLE DOCKED INTO TARANTULA THICK FILAMENT 3D-MAP ALLOWS IN DEPTH STUDY OF INTRA- E INTERMOLECULAR INTERACTIONS RELATED ID: EMD-2240 RELATED DB: EMDB 3D STRUCTURE OF MYOSIN FILAMENTS ISOLATED FROM HUMAN HEART MUSCLES BY NEGATIVE STAIN ELECTRON MICROSCOPY AND SINGLE PARTICLE IMAGE ANALYSIS