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(-) Description

Title :  CRYSTAL STRUCTURE OF THE COILED-COIL SURROUNDING SKIP 3 OF MYH7
 
Authors :  K. C. Taylor, M. Buvoli, E. N. Korkmaz, A. Buvoli, Y. Zheng, N. T. Heinz, C L. A. Leinwand, I. Rayment
Date :  12 Dec 14  (Deposition) - 01 Jul 15  (Release) - 29 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.33
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Myosin, Coiled Coil, Skip Residue, Fusion, Gp7, Eb1, Myh7, Cardiac, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. C. Taylor, M. Buvoli, E. N. Korkmaz, A. Buvoli, Y. Zheng, N. T. Heinze Q. Cui, L. A. Leinwand, I. Rayment
Skip Residues Modulate The Structural Properties Of The Myosin Rod And Guide Thick Filament Assembly.
Proc. Natl. Acad. Sci. Usa V. 112 E3806 2015
PubMed-ID: 26150528  |  Reference-DOI: 10.1073/PNAS.1505813112

(-) Compounds

Molecule 1 - XRCC4-MYH7(1551-1609) CHIMERA PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP Q13426 RESIDUES 2-147,UNP P12883 RESIDUES 1551-1609
    Gene: XRCC4, MYH7, MYHCB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CHIMERA PROTEIN OF DNA REPAIR PROTEIN XRCC4 AND MYOSIN-7

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4XA4)

(-) Sites  (0, 0)

(no "Site" information available for 4XA4)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XA4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4XA4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XA4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XA4)

(-) Exons   (0, 0)

(no "Exon" information available for 4XA4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:200
                                                                                                                                                                                                                                         
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee..eeeeeeeeeeee..hhhh.eeeeee....eeeeeehhhhhhhhhhh...hhhhhhhhhhhhhh.......eeeeee.....eeeeeee....eeeeeeee.ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xa4 A    1 GERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTTAENQAKNEHLQKELEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQAKRNHLRVVDSLQTSLDA 1603
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140      1553      1563      1573      1583      1593      1603
                                                                                                                                                                            147|                                                    
                                                                                                                                                                            1551                                                    


Chain B from PDB  Type:PROTEIN  Length:199
                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeeeee..hhhhheeeeee....eeeeeehhhhhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee.....eeeeeeee..eeeeeeeee.ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xa4 B    1 GERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLKDVSFRLGSFNLEKVENPAEVIRELICYCLDTTAENQAKNEHLQKELEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQAKRNHLRVVDSLQTSLD 1602
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140      1553      1563      1573      1583      1593         
                                                                                                                                                                            147|                                                   
                                                                                                                                                                            1551
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XA4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XA4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XA4)

(-) Gene Ontology  (55, 56)

Asymmetric/Biological Unit(hide GO term definitions)

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  4xa4
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  MYH7_HUMAN | P12883
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  XRCC4_HUMAN | Q13426
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MYH7_HUMAN | P12883: 1ik2 2fxm 2fxo 3dtp 4db1 4p7h 4pa0 4xa1 4xa3 4xa6 5chx 5cj0 5cj1 5cj4 5tby
        XRCC4_HUMAN | Q13426: 1fu1 1ik9 3ii6 3mud 3q4f 3rwr 3sr2 3w03 5chx 5cj0 5cj4 5e50

(-) Related Entries Specified in the PDB File

4xa1 4XA1 CONTAINS THE COILED-COIL SURROUNDING SKIP 1 OF MYH7
4xa3 4XA3 CONTAINS THE COILED-COIL SURROUNDING SKIP 2 OF MYH7
4xa6