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(-) Description

Title :  BOVINE HEART CYTOCHROME C OXIDASE IN THE FULLY REDUCED STATE AT 1.6 ANGSTROM RESOLUTION
 
Authors :  N. Yano, K. Muramoto, A. Shimada, S. Takemura, J. Baba, H. Fujisawa, M. M K. Shinzawa-Itoh, E. Yamashita, T. Tsukihara, S. Yoshikawa
Date :  01 Dec 15  (Deposition) - 14 Sep 16  (Release) - 23 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M  (1x)
Biol. Unit 2:  N,O,P,Q,R,S,T,U,V,W,X,Y,Z  (1x)
Keywords :  Oxidoreductase, Respiratory Chain, Proton Pump, Heme (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Yano, K. Muramoto, A. Shimada, S. Takemura, J. Baba, H. Fujisawa, M. Mochizuki, K. Shinzawa-Itoh, E. Yamashita, T. Tsukihara, S. Yoshikawa
The Mg2+-Containing Water Cluster Of Mammalian Cytochrome C Oxidase Collects Four Pumping Proton Equivalents In Each Catalytic Cycle.
J. Biol. Chem. V. 291 23882 2016
PubMed-ID: 27605664  |  Reference-DOI: 10.1074/JBC.M115.711770

(-) Compounds

Molecule 1 - CYTOCHROME C OXIDASE SUBUNIT 1
    ChainsA, N
    EC Number1.9.3.1
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE I
 
Molecule 2 - CYTOCHROME C OXIDASE SUBUNIT 2
    ChainsB, O
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE II
 
Molecule 3 - CYTOCHROME C OXIDASE SUBUNIT 3
    ChainsC, P
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE III
 
Molecule 4 - CYTOCHROME C OXIDASE SUBUNIT 4 ISOFORM 1, MITOCHONDRIAL
    ChainsD, Q
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE IV,CYTOCHROME C OXIDASE SUBUNIT IV ISOFORM 1,COX IV-1
 
Molecule 5 - CYTOCHROME C OXIDASE SUBUNIT 5A, MITOCHONDRIAL
    ChainsE, R
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VA
 
Molecule 6 - CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
    ChainsF, S
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIA,CYTOCHROME C OXIDASE POLYPEPTIDE VB
 
Molecule 7 - CYTOCHROME C OXIDASE SUBUNIT 6A2, MITOCHONDRIAL
    ChainsG, T
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIA-HEART,COXVIAH, CYTOCHROME C OXIDASE POLYPEPTIDE VIB
 
Molecule 8 - CYTOCHROME C OXIDASE SUBUNIT 6B1
    ChainsH, U
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VII,CYTOCHROME C OXIDASE SUBUNIT AED,CYTOCHROME C OXIDASE SUBUNIT VIB ISOFORM 1,COX VIB-1
 
Molecule 9 - CYTOCHROME C OXIDASE SUBUNIT 6C
    ChainsI, V
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIC,CYTOCHROME C OXIDASE SUBUNIT STA
 
Molecule 10 - CYTOCHROME C OXIDASE SUBUNIT 7A1, MITOCHONDRIAL
    ChainsJ, W
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE SUBUNIT VIIIC,VIIIC,CYTOCHROME C OXIDASE SUBUNIT VIIA-HEART,CYTOCHROME C OXIDASE SUBUNIT VIIA-H, CYTOCHROME C OXIDASE SUBUNIT VIIA-MUSCLE,CYTOCHROME C OXIDASE SUBUNIT VIIA-M
 
Molecule 11 - CYTOCHROME C OXIDASE SUBUNIT 7B, MITOCHONDRIAL
    ChainsK, X
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIIB,IHQ
 
Molecule 12 - CYTOCHROME C OXIDASE SUBUNIT 7C, MITOCHONDRIAL
    ChainsL, Y
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIIIA,CYTOCHROME C OXIDASE POLYPEPTIDE VIIC
 
Molecule 13 - CYTOCHROME C OXIDASE SUBUNIT 8B, MITOCHONDRIAL
    ChainsM, Z
    Organism CommonBOVINE
    Organism ScientificBOS TAURUS
    Organism Taxid9913
    SynonymCYTOCHROME C OXIDASE POLYPEPTIDE VIII-HEART,CYTOCHROME C OXIDASE SUBUNIT 8-1,CYTOCHROME C OXIDASE SUBUNIT 8H,IX,VIIIB

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526
Asymmetric Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ
Biological Unit 1 (1x)ABCDEFGHIJKLM             
Biological Unit 2 (1x)             NOPQRSTUVWXYZ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (17, 62)

Asymmetric Unit (17, 62)
No.NameCountTypeFull Name
1CDL4Ligand/IonCARDIOLIPIN
2CHD8Ligand/IonCHOLIC ACID
3CU2Ligand/IonCOPPER (II) ION
4CUA2Ligand/IonDINUCLEAR COPPER ION
5DMU4Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME4Mod. Amino AcidN-FORMYLMETHIONINE
7HEA4Ligand/IonHEME-A
8MG2Ligand/IonMAGNESIUM ION
9NA2Ligand/IonSODIUM ION
10PEK6Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PGV8Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
12PSC2Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
13SAC2Mod. Amino AcidN-ACETYL-SERINE
14TGL6Ligand/IonTRISTEAROYLGLYCEROL
15TPO2Mod. Amino AcidPHOSPHOTHREONINE
16UNX2Ligand/IonUNKNOWN ATOM OR ION
17ZN2Ligand/IonZINC ION
Biological Unit 1 (13, 28)
No.NameCountTypeFull Name
1CDL2Ligand/IonCARDIOLIPIN
2CHD5Ligand/IonCHOLIC ACID
3CU-1Ligand/IonCOPPER (II) ION
4CUA1Ligand/IonDINUCLEAR COPPER ION
5DMU2Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME2Mod. Amino AcidN-FORMYLMETHIONINE
7HEA2Ligand/IonHEME-A
8MG-1Ligand/IonMAGNESIUM ION
9NA-1Ligand/IonSODIUM ION
10PEK3Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PGV4Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
12PSC1Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
13SAC1Mod. Amino AcidN-ACETYL-SERINE
14TGL3Ligand/IonTRISTEAROYLGLYCEROL
15TPO1Mod. Amino AcidPHOSPHOTHREONINE
16UNX1Ligand/IonUNKNOWN ATOM OR ION
17ZN-1Ligand/IonZINC ION
Biological Unit 2 (13, 26)
No.NameCountTypeFull Name
1CDL2Ligand/IonCARDIOLIPIN
2CHD3Ligand/IonCHOLIC ACID
3CU-1Ligand/IonCOPPER (II) ION
4CUA1Ligand/IonDINUCLEAR COPPER ION
5DMU2Ligand/IonDECYL-BETA-D-MALTOPYRANOSIDE
6FME2Mod. Amino AcidN-FORMYLMETHIONINE
7HEA2Ligand/IonHEME-A
8MG-1Ligand/IonMAGNESIUM ION
9NA-1Ligand/IonSODIUM ION
10PEK3Ligand/Ion(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE
11PGV4Ligand/Ion(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
12PSC1Ligand/Ion(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE
13SAC1Mod. Amino AcidN-ACETYL-SERINE
14TGL3Ligand/IonTRISTEAROYLGLYCEROL
15TPO1Mod. Amino AcidPHOSPHOTHREONINE
16UNX1Ligand/IonUNKNOWN ATOM OR ION
17ZN-1Ligand/IonZINC ION

(-) Sites  (53, 53)

Asymmetric Unit (53, 53)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:31 , SER A:34 , ILE A:37 , ARG A:38 , TYR A:54 , VAL A:58 , HIS A:61 , ALA A:62 , MET A:65 , VAL A:70 , ILE A:73 , GLY A:125 , TRP A:126 , TYR A:371 , PHE A:377 , HIS A:378 , SER A:382 , MET A:390 , PHE A:393 , MET A:417 , PHE A:425 , GLN A:428 , ARG A:438 , ARG A:439 , TYR A:440 , VAL A:465 , HOH A:727 , HOH A:756 , HOH A:774binding site for residue HEA A 601
02AC2SOFTWARETRP A:126 , TRP A:236 , VAL A:243 , TYR A:244 , ILE A:247 , HIS A:290 , HIS A:291 , THR A:309 , ILE A:312 , THR A:316 , GLY A:317 , GLY A:352 , GLY A:355 , ILE A:356 , LEU A:358 , ALA A:359 , ASP A:364 , HIS A:368 , VAL A:373 , HIS A:376 , PHE A:377 , VAL A:380 , LEU A:381 , ARG A:438 , HOH A:720 , HOH A:765 , HOH A:803 , HOH A:857 , ILE B:34binding site for residue HEA A 602
03AC3SOFTWAREHIS A:240 , HIS A:290 , HIS A:291binding site for residue CU A 603
04AC4SOFTWAREHIS A:368 , ASP A:369 , GLU B:198 , HOH B:432 , HOH B:467 , HOH B:540binding site for residue MG A 604
05AC5SOFTWAREGLU A:40 , GLY A:45 , SER A:441 , HOH A:848binding site for residue NA A 605
06AC6SOFTWAREPHE A:94 , PRO A:95 , ARG A:96 , MET A:97 , HIS A:151 , HOH A:755 , HIS C:9 , GLY C:20 , THR C:28 , ASN C:50 , MET C:54 , TRP C:57 , TRP C:58 , GLU C:64 , HIS C:71 , GLY C:82 , GLU C:90 , PEK C:303 , HOH C:492binding site for residue PGV A 606
07AC7SOFTWAREASN A:406 , THR A:408 , ARG A:480 , HOH A:701 , HOH A:705 , HOH A:758 , HOH A:900 , HOH A:963 , PHE D:87 , HIS K:10 , GLN M:15 , LEU M:19 , HOH M:220binding site for residue PGV A 607
08AC8SOFTWAREASN A:422 , PHE A:426 , PHE A:430 , LEU A:433 , LEU B:7 , LEU B:28 , VAL B:31 , PHE B:32 , SER B:35 , SER B:36 , LEU B:39binding site for residue TGL B 301
09AC9SOFTWAREHIS B:161 , CYS B:196 , GLU B:198 , CYS B:200 , HIS B:204 , MET B:207binding site for residue CUA B 302
10AD1SOFTWAREMET A:271 , TRP A:275 , GLN B:59 , GLU B:62 , THR B:63 , HOH B:445 , HOH B:446 , HOH B:457 , ARG T:14 , ARG T:17 , PHE T:21 , GLY T:22 , PEK T:103binding site for residue CHD B 303
11AD2SOFTWAREPHE A:321 , HIS A:328 , ILE B:41 , HIS B:52 , MET B:56 , ASP B:57 , VAL B:61 , HOH B:472 , THR E:7 , ASP E:8 , PHE E:11 , HOH E:290 , ARG I:10 , ALA I:14binding site for residue PSC B 304
12AD3SOFTWARESER C:29 , MET C:33 , PHE C:37 , SER J:46 , TYR J:48 , CYS J:49 , TRP J:52 , HOH J:237binding site for residue DMU C 301
13AD4SOFTWAREHIS A:151 , PGV A:606 , HOH A:903 , HOH A:973 , TRP C:34 , TYR C:181 , TYR C:182 , ALA C:184 , PHE C:186 , THR C:187 , ILE C:188 , PHE C:198 , GLY C:202 , HOH C:566 , TRP G:62 , THR G:68 , PHE G:69 , PHE G:70 , HIS G:71 , ASN G:76 , HOH G:239binding site for residue PEK C 303
14AD5SOFTWAREMET C:54 , TRP C:58 , VAL C:61 , SER C:65 , THR C:66 , ILE C:210 , PHE C:214 , ARG C:221 , HIS C:226 , PHE C:227 , THR C:228 , HIS C:231 , HIS C:232 , PHE C:233 , GLY C:234 , CDL C:305 , HOH C:426 , HOH C:440 , HOH C:498 , HOH F:231binding site for residue PGV C 304
15AD6SOFTWAREMET C:51 , LEU C:52 , MET C:54 , TYR C:55 , ARG C:59 , ILE C:62 , ARG C:63 , PHE C:67 , THR C:213 , PHE C:220 , ARG C:221 , LYS C:224 , HIS C:226 , PGV C:304 , HOH C:413 , HOH C:529 , LYS J:8binding site for residue CDL C 305
16AD7SOFTWAREARG C:156 , GLN C:161 , PHE C:164 , LEU C:223 , HOH C:496 , PHE J:1binding site for residue CHD C 306
17AD8SOFTWAREHIS A:233 , ASP A:300 , THR A:301 , TYR A:304 , HOH A:716 , TRP C:99 , HIS C:103 , HOH C:446 , HOH C:463 , HOH C:493 , HOH C:513 , HOH C:523 , HOH C:533 , LEU P:127binding site for residue CHD C 307
18AD9SOFTWARELYS C:157 , HIS C:158 , GLN C:161 , ALA F:1 , ARG G:17 , PHE G:21 , CDL G:101 , CHD G:103 , ILE N:311 , GLN O:59binding site for residue PEK C 308
19AE1SOFTWARETHR C:95 , TRP C:99 , TYR C:102 , HIS C:103 , LEU C:106 , ALA C:107 , HOH C:448 , HOH C:466 , HOH C:495 , HOH C:512 , ASN H:24 , ALA T:1binding site for residue PGV C 309
20AE2SOFTWARETRP A:334 , GLY A:343 , LEU B:39 , ILE B:42 , LYS B:49 , HOH B:572 , ARG D:73 , THR D:75 , GLU D:77 , TRP D:78 , HOH D:346 , HOH D:373 , ARG I:16binding site for residue TGL D 201
21AE3SOFTWARECYS F:60 , CYS F:62 , CYS F:82 , CYS F:85binding site for residue ZN F 101
22AE4SOFTWAREASN C:125 , LEU C:127 , LEU C:131 , PEK C:308 , HOH C:481 , TPO G:11 , SER G:27 , LEU G:30 , CYS G:31 , ASN G:34 , LEU G:37 , HIS G:38 , HOH G:216 , HOH G:258 , HOH G:267 , HOH G:271 , PHE N:282 , ILE N:286 , ASP N:300 , SER N:307 , ILE N:311 , LEU O:78 , LEU O:81binding site for residue CDL G 101
23AE5SOFTWARESER G:2 , ALA G:3 , LYS G:5 , GLY G:6 , HIS G:8 , HOH G:246 , HOH G:259 , HOH G:270 , LYS P:77 , ARG P:80 , ILE P:84 , VAL P:91 , THR P:95 , PHE P:98 , TRP P:240 , VAL P:247binding site for residue PEK G 102
24AE6SOFTWAREPEK C:308 , ARG G:14 , ARG G:17 , PHE G:18 , PHE G:21 , GLY G:22 , HOH G:206 , HOH G:220 , HOH G:236 , MET N:271 , GLN O:59 , GLU O:62 , THR O:63 , HOH O:417binding site for residue CHD G 103
25AE7SOFTWARETYR J:32 , ARG J:33 , MET J:36 , THR J:37binding site for residue CHD J 101
26AE8SOFTWARETHR A:17 , LEU A:21 , PHE A:22 , TRP A:25 , PHE A:400 , SER A:401 , ILE L:11 , PRO L:12 , PHE L:13 , SER L:14 , ARG L:20 , MET L:24 , SER L:31 , HOH L:239binding site for residue TGL L 101
27AE9SOFTWARETRP D:98 , LEU M:28 , TRP M:32 , TYR M:35 , HIS M:36 , HOH M:215 , HOH M:226binding site for residue DMU M 101
28AF1SOFTWARETHR N:31 , SER N:34 , ILE N:37 , ARG N:38 , TYR N:54 , VAL N:58 , HIS N:61 , ALA N:62 , MET N:65 , VAL N:70 , ILE N:73 , GLY N:125 , TRP N:126 , TYR N:371 , PHE N:377 , HIS N:378 , SER N:382 , PHE N:393 , MET N:417 , PHE N:425 , GLN N:428 , ARG N:438 , ARG N:439 , VAL N:465 , HOH N:724 , HOH N:738 , HOH N:787binding site for residue HEA N 601
29AF2SOFTWARETRP N:126 , TRP N:236 , VAL N:243 , TYR N:244 , ILE N:247 , HIS N:290 , HIS N:291 , THR N:309 , ILE N:312 , THR N:316 , GLY N:317 , GLY N:352 , GLY N:355 , ILE N:356 , LEU N:358 , ALA N:359 , ASP N:364 , HIS N:368 , VAL N:373 , HIS N:376 , PHE N:377 , VAL N:380 , LEU N:381 , ARG N:438 , HOH N:708 , HOH N:776 , HOH N:807 , HOH N:821binding site for residue HEA N 602
30AF3SOFTWAREHIS N:240 , HIS N:290 , HIS N:291binding site for residue CU N 603
31AF4SOFTWAREHIS N:368 , ASP N:369 , GLU O:198 , HOH O:436 , HOH O:448 , HOH O:540binding site for residue MG N 604
32AF5SOFTWAREGLU N:40 , GLY N:45 , SER N:441 , HOH N:888binding site for residue NA N 605
33AF6SOFTWAREASN N:406 , THR N:408 , TRP N:409 , HOH N:750 , HOH N:907 , PHE Q:87 , PHE X:9 , PRO Z:12 , GLN Z:15 , ALA Z:16 , LEU Z:19 , SER Z:20 , HOH Z:209binding site for residue PGV N 606
34AF7SOFTWAREPHE N:94 , PRO N:95 , ARG N:96 , MET N:97 , HOH N:735 , HOH N:757 , HIS P:9 , GLY P:20 , ALA P:24 , ASN P:50 , TRP P:57 , TRP P:58 , GLU P:64 , HIS P:71 , GLY P:82 , PEK T:101binding site for residue PGV N 607
35AF8SOFTWAREASN N:422 , PHE N:426 , PHE N:430 , LEU N:433 , HOH N:905 , LEU O:7 , LEU O:28 , PHE O:32 , SER O:35 , LEU O:39 , ARG V:43 , HOH V:157binding site for residue TGL N 608
36AF9SOFTWARETHR N:17 , LEU N:18 , TRP N:25 , TRP N:81 , LEU N:113 , PHE N:400 , PRO Y:12 , PHE Y:13 , SER Y:14 , ARG Y:20 , MET Y:24 , PHE Y:28 , PHE Y:29 , SER Y:31 , HOH Y:125binding site for residue TGL N 609
37AG1SOFTWAREHIS O:161 , CYS O:196 , GLU O:198 , CYS O:200 , HIS O:204 , MET O:207binding site for residue CUA O 301
38AG2SOFTWAREALA G:1 , TRP P:99 , HIS P:103 , ALA P:107 , CHD P:307 , HOH P:403 , HOH P:418 , HOH P:461 , HOH P:470 , HOH P:536 , HOH P:545 , ASN U:24binding site for residue PGV P 301
39AG3SOFTWARELEU N:110 , SER P:29 , MET P:33 , PHE P:37 , HOH P:402 , TYR W:48 , CYS W:49 , TRP W:52binding site for residue DMU P 302
40AG4SOFTWAREMET P:54 , TRP P:58 , VAL P:61 , SER P:65 , THR P:66 , ILE P:210 , PHE P:214 , ARG P:221 , HIS P:226 , PHE P:227 , THR P:228 , HIS P:231 , HIS P:232 , PHE P:233 , GLY P:234 , CDL P:305 , HOH P:428 , HOH P:444 , HOH P:455 , HOH P:490binding site for residue PGV P 304
41AG5SOFTWAREMET P:51 , LEU P:52 , TYR P:55 , ARG P:59 , ILE P:62 , ARG P:63 , PHE P:67 , PHE P:220 , LYS P:224 , HIS P:226 , PGV P:304 , HOH P:410 , HOH P:459 , HOH P:472 , HOH P:495 , HOH P:499 , LYS W:8binding site for residue CDL P 305
42AG6SOFTWAREARG P:156 , PHE P:164 , PHE P:219 , LEU P:223 , HOH P:551 , PHE W:1binding site for residue CHD P 306
43AG7SOFTWAREHIS N:233 , ASP N:300 , THR N:301 , TYR N:304 , HOH N:736 , TRP P:99 , HIS P:103 , PGV P:301 , HOH P:424 , HOH P:486 , HOH P:506binding site for residue CHD P 307
44AG8SOFTWARETRP N:334 , PHE N:414 , HOH N:891 , LEU O:39 , THR O:47 , HOH O:567 , ARG Q:73 , THR Q:75 , GLU Q:77 , TRP Q:78 , MET Q:86 , HOH Q:363 , ARG V:16 , HOH V:151binding site for residue TGL Q 201
45AG9SOFTWAREPHE N:321 , HIS N:328 , ILE O:41 , HIS O:52 , MET O:56 , ASP O:57 , VAL O:61 , HOH O:422 , GLU R:6 , THR R:7 , ASP R:8 , ARG V:10binding site for residue PSC R 201
46AH1SOFTWARECYS S:60 , CYS S:62 , CYS S:82 , CYS S:85binding site for residue ZN S 101
47AH2SOFTWAREHIS N:151 , PGV N:607 , TRP P:34 , TYR P:181 , TYR P:182 , ALA P:184 , PHE P:186 , THR P:187 , ILE P:188 , PHE P:198 , GLY P:202 , TRP T:62 , THR T:68 , PHE T:69 , PHE T:70 , HIS T:71 , ASN T:76 , HOH T:203 , HOH T:242binding site for residue PEK T 101
48AH3SOFTWARELYS C:77 , ARG C:80 , ILE C:84 , VAL C:91 , PHE C:98 , TRP C:240 , VAL C:247 , SER T:2 , ALA T:3 , LYS T:5 , GLY T:6 , HIS T:8 , TPO T:11 , HOH T:221binding site for residue PEK T 102
49AH4SOFTWARESER A:279 , ILE A:311 , CHD B:303 , LYS P:157 , HIS P:158 , GLN P:161 , THR P:168 , TYR P:172 , ALA S:1 , ARG T:17 , GLY T:22 , CDL T:104 , HOH T:206binding site for residue PEK T 103
50AH5SOFTWAREILE A:286 , ASP A:300 , SER A:307 , ILE A:311 , ALA B:77 , LEU B:78 , LEU B:81 , TYR B:85 , HOH C:446 , ASN P:125 , LEU P:127 , SER P:135 , TYR P:253 , SER T:27 , LEU T:30 , CYS T:31 , ASN T:34 , LEU T:37 , HIS T:38 , PEK T:103 , HOH T:223 , HOH T:250binding site for residue CDL T 104
51AH6SOFTWAREILE N:3 , PHE N:8 , TYR W:32 , ARG W:33 , THR W:37binding site for residue CHD W 101
52AH7SOFTWARETRP Q:98 , LEU Z:27 , LEU Z:28 , GLY Z:31 , TRP Z:32 , TYR Z:35 , HIS Z:36 , HOH Z:208 , HOH Z:217binding site for residue DMU Z 101
53AH8SOFTWARETRP N:236 , PHE N:238 , GLY N:239 , PRO N:241 , GLU N:242 , VAL N:243 , ILE N:245 , LEU N:246 , ILE N:247 , LEU N:248 , ILE N:280 , GLY N:284 , VAL N:287 , HIS N:290 , ILE N:312 , HEA N:602 , CU N:603binding site for Di-peptide HIS N 240 and TYR N 244

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1H:29 -H:64
2H:39 -H:53
3U:29 -U:64
4U:39 -U:53

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Pro A:130 -Pro A:131
2Cys A:498 -Pro A:499
3Gln B:103 -Trp B:104
4Trp C:116 -Pro C:117
5Pro N:130 -Pro N:131
6Cys N:498 -Pro N:499
7Gln O:103 -Trp O:104
8Trp P:116 -Pro P:117

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5B1B)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5B1B)

(-) Exons   (0, 0)

(no "Exon" information available for 5B1B)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:514
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhh..............ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b A   1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510    
                            |                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                            1-FME                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             

Chain B from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeee.....eeeee...hhhhh.............eeee....eeeeeee....eeeeehhhheeeee.....eeeee.....eeeeee.......hhhh.eeeeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b B   1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       
                            1-FME                                                                                                                                                                                                                              

Chain C from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b C   3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252         

Chain D from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhh.ee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5b1b D   4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143    

Chain E from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5b1b E   5 HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109
                                    14        24        34        44        54        64        74        84        94       104     

Chain F from PDB  Type:PROTEIN  Length:98
                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhh....................eeeee...eeeeee.........eeeeee....ee......eeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 5b1b F   1 ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH  98
                                    10        20        30        40        50        60        70        80        90        

Chain G from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhhhh.............................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 5b1b G   1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK  84
                                    10|       20        30        40        50        60        70        80    
                                     11-TPO                                                                     

Chain H from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5b1b H   7 KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI  85
                                    16        26        36        46        56        66        76         

Chain I from PDB  Type:PROTEIN  Length:73
                                                                                                         
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                 5b1b I   1 sTALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK  73
                            |       10        20        30        40        50        60        70   
                            1-SAC                                                                    

Chain J from PDB  Type:PROTEIN  Length:58
                                                                                          
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                 5b1b J   1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK  58
                                    10        20        30        40        50        

Chain K from PDB  Type:PROTEIN  Length:49
                                                                                 
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 5b1b K   6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR  54
                                    15        25        35        45         

Chain L from PDB  Type:PROTEIN  Length:46
                                                                              
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                 5b1b L   2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK  47
                                    11        21        31        41      

Chain M from PDB  Type:PROTEIN  Length:43
                                                                           
               SCOP domains ------------------------------------------- SCOP domains
               CATH domains ------------------------------------------- CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------- PROSITE
                 Transcript ------------------------------------------- Transcript
                 5b1b M   1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS  43
                                    10        20        30        40   

Chain N from PDB  Type:PROTEIN  Length:514
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee..hhhhhhhhh..............ee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b N   1 mFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510    
                            1-FME                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             

Chain O from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeee..eeeeee.....eeeee...hhhhh.............eeee....eeeeeee....eeeeehhhheeeee.....eeeee.....eeeeee.......hhhh.eeeeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b O   1 mAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML 227
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       
                            1-FME                                                                                                                                                                                                                              

Chain P from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5b1b P   3 HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS 261
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252         

Chain Q from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.......hhh.ee....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5b1b Q   4 SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK 147
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143    

Chain R from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhh...hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5b1b R   5 HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV 109
                                    14        24        34        44        54        64        74        84        94       104     

Chain S from PDB  Type:PROTEIN  Length:98
                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhh....................eeee....eeeeee.........eeeeee....ee......eeeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 5b1b S   1 ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH  98
                                    10        20        30        40        50        60        70        80        90        

Chain T from PDB  Type:PROTEIN  Length:84
                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhhhhhhhh................................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------ Transcript
                 5b1b T   1 ASAAKGDHGGtGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK  84
                                    10|       20        30        40        50        60        70        80    
                                     11-TPO                                                                     

Chain U from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 5b1b U   7 KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI  85
                                    16        26        36        46        56        66        76         

Chain V from PDB  Type:PROTEIN  Length:73
                                                                                                         
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                 5b1b V   1 sTALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK  73
                            |       10        20        30        40        50        60        70   
                            1-SAC                                                                    

Chain W from PDB  Type:PROTEIN  Length:58
                                                                                          
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh....hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                 5b1b W   1 FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK  58
                                    10        20        30        40        50        

Chain X from PDB  Type:PROTEIN  Length:49
                                                                                 
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                 5b1b X   6 APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR  54
                                    15        25        35        45         

Chain Y from PDB  Type:PROTEIN  Length:46
                                                                              
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                 5b1b Y   2 HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK  47
                                    11        21        31        41      

Chain Z from PDB  Type:PROTEIN  Length:43
                                                                           
               SCOP domains ------------------------------------------- SCOP domains
               CATH domains ------------------------------------------- CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author .ee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------- PROSITE
                 Transcript ------------------------------------------- Transcript
                 5b1b Z   1 ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS  43
                                    10        20        30        40   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5B1B)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5B1B)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5B1B)

(-) Gene Ontology  (32, 127)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        COX1_BOVIN | P003961occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX2_BOVIN | P685301occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX3_BOVIN | P004151occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5iy5 5luf 5xdq
        COX41_BOVIN | P004231occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX5A_BOVIN | P004261occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX5B_BOVIN | P004281occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX6C_BOVIN | P040381occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX7B_BOVIN | P131831occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX7C_BOVIN | P004301occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        COX8B_BOVIN | P101751occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        CX6A2_BOVIN | P074711occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        CX6B1_BOVIN | P004291occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq
        CX7A1_BOVIN | P074701occ 1oco 1ocr 1ocz 1v54 1v55 2dyr 2dys 2eij 2eik 2eil 2eim 2ein 2occ 2y69 2ybb 2zxw 3abk 3abl 3abm 3ag1 3ag2 3ag3 3ag4 3asn 3aso 3wg7 3x2q 5b1a 5b3s 5gpn 5iy5 5luf 5xdq

(-) Related Entries Specified in the PDB File

5b1a