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(-) Description

Title :  HORSE L TYPE FERRITIN IRON LOADED FOR 60 MINUTES
 
Authors :  C. Pozzi, F. Di Pisa, S. Mangani
Date :  05 Jul 16  (Deposition) - 22 Feb 17  (Release) - 22 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.22
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (24x)
Keywords :  L-Type, Ferritin, Mineralization, Iron, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Pozzi, S. Ciambellotti, C. Bernacchioni, F. Di Pisa, S. Mangani, P. Turano
Chemistry At The Protein-Mineral Interface In L-Ferritin Assists The Assembly Of A Functional ( Mu (3)-Oxo)Tris[( Mu (2)-Peroxo)] Triiron(Iii) Cluster.
Proc. Natl. Acad. Sci. V. 114 2580 2017 U. S. A.
PubMed-ID: 28202724  |  Reference-DOI: 10.1073/PNAS.1614302114

(-) Compounds

Molecule 1 - FERRITIN LIGHT CHAIN
    Chains: A
    Engineered: YES
    Expression System: EQUUS CABALLUS
    Expression System Taxid: 9796
    Gene: FTL
    Organism Common: HORSE
    Organism Scientific: EQUUS CABALLUS
    Organism Taxid: 9796
    Synonym: FERRITIN L SUBUNIT

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (24x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 13)

Asymmetric Unit (7, 13)
No.NameCountTypeFull Name
1CD3Ligand/IonCADMIUM ION
2CL1Ligand/IonCHLORIDE ION
3CME1Mod. Amino AcidS,S-(2-HYDROXYETHYL)THIOCYSTEINE
4FE4Ligand/IonFE (III) ION
5GOL1Ligand/IonGLYCEROL
6OXY1Ligand/IonOXYGEN MOLECULE
7PER2Ligand/IonPEROXIDE ION
Biological Unit 1 (4, 120)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2CL-1Ligand/IonCHLORIDE ION
3CME24Mod. Amino AcidS,S-(2-HYDROXYETHYL)THIOCYSTEINE
4FE-1Ligand/IonFE (III) ION
5GOL24Ligand/IonGLYCEROL
6OXY24Ligand/IonOXYGEN MOLECULE
7PER48Ligand/IonPEROXIDE ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:80 , HOH A:437binding site for residue CD A 201
02AC2SOFTWAREGLU A:11 , HOH A:405binding site for residue CD A 202
03AC3SOFTWAREGLU A:130binding site for residue CD A 203
04AC4SOFTWAREGLU A:57 , GLU A:60 , OXY A:209 , PER A:210 , PER A:211binding site for residue FE A 204
05AC5SOFTWAREGLU A:56 , GLU A:60 , FE A:206 , OXY A:209 , PER A:211 , HOH A:420binding site for residue FE A 205
06AC6SOFTWAREGLU A:53 , GLU A:56 , GLU A:57 , FE A:205 , OXY A:209 , PER A:210binding site for residue FE A 206
07AC7SOFTWAREGLU A:53 , GLU A:56binding site for residue FE A 207
08AC8SOFTWAREASN A:7binding site for residue CL A 208
09AC9SOFTWAREGLU A:56 , GLU A:57 , GLU A:60 , FE A:204 , FE A:205 , FE A:206 , PER A:210 , PER A:211binding site for residue OXY A 209
10AD1SOFTWAREGLU A:53 , GLU A:57 , FE A:204 , FE A:206 , OXY A:209 , PER A:211binding site for residue PER A 210
11AD2SOFTWAREGLU A:60 , FE A:204 , FE A:205 , OXY A:209 , PER A:210binding site for residue PER A 211
12AD3SOFTWARESER A:27binding site for residue GOL A 212

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5LG2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5LG2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5LG2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5LG2)

(-) Exons   (0, 0)

(no "Exon" information available for 5LG2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:171
                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5lg2 A   2 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVcHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEYLFERLTLK 172
                                    11        21        31        41      | 51        61        71        81        91       101       111       121       131       141       151       161       171 
                                                                         48-CME
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LG2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LG2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5LG2)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)

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  5lg2
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  FRIL_HORSE | P02791
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FRIL_HORSE | P02791: 1aew 1dat 1gwg 1hrs 1ier 1ies 1xz1 1xz3 2g4h 2gyd 2v2i 2v2j 2v2l 2v2m 2v2n 2v2o 2v2p 2v2r 2v2s 2w0o 2z5p 2z5q 2z5r 2za6 2za7 2za8 2zg7 2zg8 2zg9 2zur 3af7 3af8 3af9 3f32 3f33 3f34 3f35 3f36 3f37 3f38 3f39 3fi6 3h7g 3noz 3np0 3np2 3o7r 3o7s 3rav 3rd0 3u90 3wvu 3wvv 3wvw 4de6 4v1w 4z3b 5axs 5czu 5e1u 5e2d 5erj 5erk 5gu0 5gu1 5gu2 5gu3 5hqo 5ix6 5mij 5mik

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5LG2)