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(-) Description

Title :  CRYSTAL STRUCTURE OF TUBULIN-STATHMIN-TTL-COMPOUND 11 COMPLEX
 
Authors :  K. Parris
Date :  20 Jul 16  (Deposition) - 28 Dec 16  (Release) - 28 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Tubulin Tubulysin, Structural Protein-Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. A. Leverett, S. C. Sukuru, B. C. Vetelino, S. Musto, K. Parris, J. Pandit, F. Loganzo, A. H. Varghese, G. Bai, B. Liu, D. Liu, S. Hudson, V. R. Doppalapudi, J. Stock, C. J. O'Donnell, C. Subramanyam
Design, Synthesis, And Cytotoxic Evaluation Of Novel Tubulysin Analogues As Adc Payloads.
Acs Med Chem Lett V. 7 999 2016
PubMed-ID: 27882198  |  Reference-DOI: 10.1021/ACSMEDCHEMLETT.6B00274

(-) Compounds

Molecule 1 - TUBULIN ALPHA CHAIN
    Chains: A, C
    Organism Common: SHEEP
    Organism Scientific: OVIS ARIES
    Organism Taxid: 9940
 
Molecule 2 - TUBULIN BETA CHAIN
    Chains: B, D
    Organism Common: SHEEP
    Organism Scientific: OVIS ARIES
    Organism Taxid: 9940
 
Molecule 3 - STATHMIN-4
    Chains: E
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: STMN4
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: STATHMIN-LIKE PROTEIN B3,RB3
 
Molecule 4 - TTL PROTEIN
    Chains: F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TTL
    Organism Common: CHICKEN
    Organism Scientific: GALLUS GALLUS
    Organism Taxid: 9031

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 17)

Asymmetric/Biological Unit (6, 17)
No.NameCountTypeFull Name
16YK2Ligand/Ion(2~{S},4~{R})-4-[[2-[(1~{R},3~{R})-1-ACETYLOXY-3-[[(2~{S},3~{S})-2-[[(2~{R})-1,2-DIMETHYLPYRROLIDIN-2-YL]CARBONYLAMINO]-3-METHYL-PENTANOYL]-METHYL-AMINO]-4-METHYL-PENTYL]-1,3-THIAZOL-4-YL]CARBONYLAMINO]-5-(4-AMINOPHENYL)-2-METHYL-PENTANOIC ACID
2ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
3CA4Ligand/IonCALCIUM ION
4GDP2Ligand/IonGUANOSINE-5'-DIPHOSPHATE
5GTP2Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
6MG6Ligand/IonMAGNESIUM ION

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:10 , GLN A:11 , ALA A:12 , GLN A:15 , ASP A:69 , ASP A:98 , ALA A:99 , ASN A:101 , SER A:140 , GLY A:143 , GLY A:144 , THR A:145 , GLY A:146 , ILE A:171 , VAL A:177 , THR A:179 , GLU A:183 , ASN A:206 , TYR A:224 , ASN A:228 , ILE A:231 , MG A:502 , HOH A:603 , LYS B:254binding site for residue GTP A 501
02AC2SOFTWAREASP A:69 , GLU A:71 , GTP A:501binding site for residue MG A 502
03AC3SOFTWAREASP A:39 , THR A:41 , GLY A:44 , GLU A:55binding site for residue CA A 503
04AC4SOFTWAREGLY B:10 , GLN B:11 , CYS B:12 , GLN B:15 , SER B:140 , GLY B:143 , GLY B:144 , THR B:145 , GLY B:146 , VAL B:177 , SER B:178 , GLU B:183 , ASN B:206 , TYR B:224 , ASN B:228 , MG B:502 , 6YK B:504 , HOH B:603 , HOH B:612binding site for residue GDP B 501
05AC5SOFTWAREGLU B:71 , GDP B:501binding site for residue MG B 502
06AC6SOFTWAREGLU B:113 , TYR C:282binding site for residue CA B 503
07AC7SOFTWAREGLN B:11 , GLN B:15 , PRO B:175 , LYS B:176 , VAL B:177 , ASP B:179 , THR B:221 , PRO B:222 , THR B:223 , TYR B:224 , GLY B:225 , ARG B:278 , GDP B:501 , HOH B:608 , PRO C:325 , ASN C:329 , PHE C:351 , ILE C:355binding site for residue 6YK B 504
08AC8SOFTWAREASP B:297 , SER B:298 , HOH B:619binding site for residue MG B 505
09AC9SOFTWAREGLY C:10 , GLN C:11 , ALA C:12 , GLN C:15 , ASP C:98 , ALA C:99 , ALA C:100 , ASN C:101 , SER C:140 , GLY C:143 , GLY C:144 , THR C:145 , GLY C:146 , ILE C:171 , VAL C:177 , THR C:179 , GLU C:183 , ASN C:206 , TYR C:224 , ASN C:228 , ILE C:231 , MG C:502 , LYS D:254binding site for residue GTP C 501
10AD1SOFTWAREASP C:69 , GLU C:71 , GTP C:501binding site for residue MG C 502
11AD2SOFTWAREASP C:39 , THR C:41 , GLY C:44 , GLY C:45 , ASP C:47 , GLU C:55binding site for residue CA C 503
12AD3SOFTWAREGLY D:10 , GLN D:11 , CYS D:12 , GLN D:15 , SER D:140 , GLY D:143 , GLY D:144 , THR D:145 , GLY D:146 , VAL D:177 , GLU D:183 , ASN D:206 , TYR D:224 , LEU D:227 , ASN D:228 , MG D:502 , MG D:503 , 6YK D:504binding site for residue GDP D 501
13AD4SOFTWARESER D:178 , THR D:180 , GLU D:183 , GDP D:501 , MG D:503binding site for residue MG D 502
14AD5SOFTWAREGLN D:11 , ASN D:101 , GDP D:501 , MG D:502 , HOH D:601binding site for residue MG D 503
15AD6SOFTWAREGLN D:11 , GLN D:15 , LYS D:176 , VAL D:177 , ASP D:179 , THR D:221 , PRO D:222 , THR D:223 , TYR D:224 , GLY D:225 , ARG D:278 , GDP D:501binding site for residue 6YK D 504
16AD7SOFTWARESER A:158 , GLU A:196 , HOH A:601 , ASP E:44binding site for residue CA E 201
17AD8SOFTWARELYS F:74 , ILE F:148 , LYS F:150 , GLN F:183 , LYS F:184 , TYR F:185 , LEU F:186 , LYS F:198 , ASP F:200 , HIS F:239 , LEU F:240 , THR F:241 , ASN F:242 , ILE F:330 , GLU F:331binding site for residue ADP F 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KX5)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Ala A:273 -Pro A:274
2Ala B:273 -Pro B:274
3Ala C:273 -Pro C:274
4Ala D:273 -Pro D:274
5Glu F:193 -Pro F:194
6Glu F:258 -Gly F:259

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KX5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KX5)

(-) Exons   (0, 0)

(no "Exon" information available for 5KX5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:441
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeehhhhhhhhhhhhhhhhhhh..................hhhhh.eee.....eee.eeeee.hhhhhh...........hhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhh........eeeee.............hhhhhhhhhhhhhhh....hhhhh.eeeeeeeeee..hhhhhhhhhhhhhhhh.........eeeeeeee................eeeeeeeee..hhhhhhhhhhhhhhhhh....hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kx5 A   1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDGEE 450
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       449 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                               438|  
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                448  


Chain B from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeehhhhhhhhhhhhhhhhhhh...........hhhhh.hhhh.eeee...eeee.eeeee..hhhhhhhhhh......hhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh......eeeeeee..........hhhhhhhhhhhhhhh....hhhhh.eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeee........eeeeeeeee..hhhhhhhhhhhhhhhhh....hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kx5 B   1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 440
                                    10        20        30        40 ||     52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272      |285       295       305       315       325       335       345       355    || 373       383       393       403       413       423       433       
                                                                    42|                                                                                                                                                                                                                                       279|                                                                          360|                                                                       
                                                                     45                                                                                                                                                                                                                                        283                                                                           369                                                                       


Chain C from PDB  Type:PROTEIN  Length:440
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeehhhhhhhhhhhhhhhhhhhh.................hhhhh.eee.....eee.eeeee.hhhhhhhhhhh......hhh.eee.......hhhhhhh.hhhhhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhhhhhhhhhh..eeeeeeee.........hhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh........eeeee...hhhhhh....hhhhhhhhhhhhhhh....hhhhh.eeeeeeeeee..hhhhhhhhhhhhhhh.............eeeee................eeeeeeeee..hhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kx5 C   1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440


Chain D from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeehhhhhhhhhhhhhhhhhhhh...........hhhhhhhhh.eeee...eeee.eeeee..hhhhhhhhhh......hhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh......eeeeeee.........hhhhhhhhhhhhhhh....hhhhh.eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeee........eeeeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5kx5 D   2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQLTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 441
                                    11        21        31        41||      53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       287       297       307       317       327       337       347       357  ||   375       385       395       405       415       425       435      
                                                                   42|                                                                                                                                                                                                                                         281|                                                                       360|                                                                        
                                                                    45                                                                                                                                                                                                                                          286                                                                        369                                                                        


Chain E from PDB  Type:PROTEIN  Length:121
                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kx5 E   6 MEVIELNKATSGQSWEVILKPPSDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 141
                                    15        25  ||    50        60        70        80        90       100       110       120       130       140 
                                                 28|                                                                                                 
                                                  44                                                                                                 


Chain F from PDB  Type:PROTEIN  Length:338
                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhhhhh...eee.........eee...................ee.....hhhhhhhhhhhhhhhhh............eeee....hhhhhhhhhhhhhh......eeeee..eee.hhhhhhhhhh..eeeee................eeeeeee.....eeeeeeeeee...................hhhhhh.............eeehhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh......ee.eeeeeeeee.....eeeeeee........hhhhhhhhhhhhh..........eeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5kx5 F   1 MYTFVVRDENSSVYAEVSRLLLATGQWKRLRKDNPRFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADKLCRKASLVKLIKTSPELSESCTWFPESYVIYPTDEREVFLAAYNRRREGREGNVWIAKSSILISSEASELLDFIDEVHVIQKYLEKPLLLEPGHRKFDIRSWVLVDHLYNIYLYREGVLRTSSEPYNSANFQDKTCHLTNHCIQKEYSKNYGRYEEGNEMFFEEFNQYLMDALNTTLENSILLQIKHIIRSCLMCIEPAISTKHLHYQSFQLFGFDFMVDEELKVWLIEVNGAPACAQKLYAELCQGIVDVAISSVFPLASIFIKLHH 380
                                    10        20        30        40        50        60        70        80        90       100 ||    132       142       152|      169     ||182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362|       
                                                                                                                               102|                        152|            175|                                                                                                                                                                                    362|       
                                                                                                                                125                         160             179                                                                                                                                                                                     373
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KX5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KX5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KX5)

(-) Gene Ontology  (23, 33)

Asymmetric/Biological Unit(hide GO term definitions)

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    Ala D:273 - Pro D:274   [ RasMol ]  
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    Disease Information: OMIM
 
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    Age Related Information: GenAge

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    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
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Access by UniProt ID/Accession number
  D0VWY9_SHEEP | D0VWY9
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  D0VWZ0_SHEEP | D0VWZ0
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  E1BQ43_CHICK | E1BQ43
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  STMN4_RAT | P63043
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        E1BQ43_CHICK | E1BQ43: 5njh 5o7a
        STMN4_RAT | P63043: 1sa0 1sa1 1z2b 3du7 3e22 3hkb 3hkc 3hkd 3hke 3n2g 3n2k 3ryc 3ryf 3ryh 3ryi 3ut5 4eb6 4i4t 4i50 4i55 4ihj 4iij 4o2a 4o2b 4o4h 4o4i 4o4j 4o4l 4tuy 4tv8 4tv9 4wbn 4x1i 4x1k 4x1y 4x20 4yj2 4yj3 4zhq 4zi7 4zol 5bmv 5c8y 5ca0 5ca1 5cb4 5ezy 5fnv 5gon 5iyz 5j2t 5j2u 5jh7 5jqg 5jvd 5la6 5lov 5lp6 5lxt 5lyj 5m7e 5m7g 5m8d 5m8g 5njh 5o7a
UniProtKB/TrEMBL
        D0VWY9_SHEEP | D0VWY9: 3hkb 3hkc 3hkd 3hke 3n2g 3n2k 3ryc 3ryf 3ryh 3ryi 3ut5 4drx 4eb6 4f61 4f6r 4hna 4lnu 4x1i 4x1k 4x1y 4x20 5eyp
        D0VWZ0_SHEEP | D0VWZ0: 3hkb 3hkc 3hkd 3hke 3n2g 3n2k 3ryc 3ryf 3ryh 3ryi 3ut5 4drx 4eb6 4f61 4f6r 4hna 4x1i 4x1k 4x1y 4x20 5eyp
        E1BQ43_CHICK | E1BQ43: 4i4t 4i50 4i55 4ihj 4iij 4o2a 4o2b 4o4h 4o4i 4o4j 4o4l 4tuy 4tv8 4tv9 4wbn 4yj2 4yj3 4zhq 4zi7 4zol 5bmv 5c8y 5ca0 5ca1 5cb4 5ezy 5fnv 5gon 5iyz 5j2t 5jh7 5jqg 5jvd 5la6 5lov 5lp6 5lxt 5lyj 5m7e 5m7g 5m8d 5m8g

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5KX5)