Chain A from PDB Type:DNA Length:197
5j0n A -117 GTCGGCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTAATACAATAAGTTGGAATTCTAAAAAAGCATTGCTTATCAATTTGTTGCAACGAACAGGTCACTATCAGTCAAAATATTGAT 79
-108 -98 -88 -78 -68 -58 -48 -38 -28 -18 -8 2 12 22 32 42 52 62 72
Chain B from PDB Type:DNA Length:139
5j0n B -21 CCGTTTCGCTCAAGTTAGTATATTAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGCCGAC 117
-12 -2 8 18 28 38 48 58 68 78 88 98 108
Chain C from PDB Type:DNA Length:41
5j0n C -19 CCGTTGAAGCCTGCTTTTTTATACTAACTTGAGCGAAACGG 21
-10 0 10 20
Chain D from PDB Type:DNA Length:99
5j0n D -79 ATCAATATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATAAGCAATGCTTTTTTAGAATTCCAACTTATTGTAAAAAAGCAGGCTTCAACGG 19
-70 -60 -50 -40 -30 -20 -10 0 10
Chain E from PDB Type:PROTEIN Length:274
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh......................hhhhhhhhhhhh.....hhhhhhhhhhhh..hhhhhh............eee......eee.....ee....eehhhhhhhhhhh...............hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh...hhhhhhhhhh............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5j0n E 72 NSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTEWDKIEIK 356
81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 ||352
337|
349
Chain F from PDB Type:PROTEIN Length:356
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhh....ee.....eeee......eee...hhhhhh....hhhhh.......................hhhhhhhhhhh......hhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh......hhhhh..............hhhhhhhhhhhhh.hhhhhhhhhhhhhh..hhhhhh......ee..eeeee......eeeee...ee....eehhhhhhhhhhh...............hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh..hhhhhh....................ee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5j0n F 1 MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK 356
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
Chain G from PDB Type:PROTEIN Length:345
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......................................hhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....hhhhh..............hhhhhhhhhhh...hhhhhhhhhhh.....hhhhhhhhhhhhh.....eee......eee.....ee....eehhhhhhhhhhh...............hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh...........ee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5j0n G 1 MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTEWDKIEIK 356
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 |351
337|
349
Chain H from PDB Type:PROTEIN Length:356
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhh............eee......eee...hhhhhhhhhhhhh......................hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh............hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.......................hhhhhhhhhhhh....hhhhhhhhhhhhh..........hhh.ee..eeeee......eeeee...ee....eehhhhhhhhhhh...............hhhhhhhhhhhhhhhh...........hhhhhhhhhhh................................ee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
5j0n H 1 MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK 356
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
Chain I from PDB Type:PROTEIN Length:96
SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..eee...eeeeeeee..................eeeeeeeehhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
5j0n I 2 ALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPK 97
11 21 31 41 51 61 71 81 91
Chain J from PDB Type:PROTEIN Length:94
SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh..eee...eeeeeee....................eeeee..hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
5j0n J 1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
10 20 30 40 50 60 70 80 90
Chain K from PDB Type:PROTEIN Length:96
SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..eee...eee.eeee..................eeee....hhhhhhh....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
5j0n K 2 ALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPK 97
11 21 31 41 51 61 71 81 91
Chain L from PDB Type:PROTEIN Length:94
SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh..eee...eeeeeeee..................eeeeee..hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
5j0n L 1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG 94
10 20 30 40 50 60 70 80 90
Chain M from PDB Type:PROTEIN Length:53
SCOP domains ----------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhh......hhhhhhhhhhh..ee...ee....ee.....ee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------- PROSITE
Transcript ----------------------------------------------------- Transcript
5j0n M 1 MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLN 53
10 20 30 40 50
Chain N from PDB Type:PROTEIN Length:54
SCOP domains ------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------ Pfam domains
Sec.struct. author .eehhhhhhhh.....hhhhhhhhhhh..ee...........ee...ee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------ Transcript
5j0n N 1 MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLNR 54
10 20 30 40 50
Chain O from PDB Type:PROTEIN Length:55
SCOP domains ------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhh......hhhhhhhhhhh..ee...eee..eee.....ee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------- Transcript
5j0n O 1 MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLNRP 55
10 20 30 40 50
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |