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(-) Description

Title :  X-RAY STRUCTURE OF AUOXO3-ENCAPSULATED HORSE SPLEEN APOFERRITIN
 
Authors :  G. Ferraro, N. Pontillo, A. Merlino
Date :  23 Mar 16  (Deposition) - 06 Jul 16  (Release) - 03 Aug 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (24x)
Keywords :  Ferritin, Nanocage, Metallodrugs, Gold Compounds, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Ferraro, D. M. Monti, A. Amoresano, N. Pontillo, G. Petruk, F. Pane, M. A. Cinellu, A. Merlino
Gold-Based Drug Encapsulation Within A Ferritin Nanocage: X-Ray Structure And Biological Evaluation As A Potential Anticancer Agent Of The Auoxo3-Loaded Protein.
Chem. Commun. (Camb. ) V. 52 9518 2016
PubMed-ID: 27326513  |  Reference-DOI: 10.1039/C6CC02516A

(-) Compounds

Molecule 1 - FERRITIN LIGHT CHAIN
    Chains: A
    Organ: SPLEEN
    Organism Common: HORSE
    Organism Scientific: EQUUS CABALLUS
    Organism Taxid: 9796
    Synonym: FERRITIN L SUBUNIT

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (24x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 17)

Asymmetric Unit (3, 17)
No.NameCountTypeFull Name
1AU7Ligand/IonGOLD ION
2CD9Ligand/IonCADMIUM ION
3SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 24)
No.NameCountTypeFull Name
1AU-1Ligand/IonGOLD ION
2CD-1Ligand/IonCADMIUM ION
3SO424Ligand/IonSULFATE ION

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:114 , CYS A:126 , HOH A:304 , HOH A:512binding site for residue AU A 201
02AC2SOFTWAREGLY A:34 , CYS A:48 , ARG A:52 , AU A:206binding site for residue AU A 202
03AC3SOFTWAREHIS A:49binding site for residue AU A 203
04AC4SOFTWAREASP A:122 , CYS A:126 , HOH A:485 , HOH A:512binding site for residue AU A 204
05AC5SOFTWAREPHE A:50 , LYS A:143 , HIS A:147binding site for residue AU A 205
06AC6SOFTWARECYS A:48 , HIS A:49 , AU A:202 , HOH A:484binding site for residue AU A 206
07AC7SOFTWAREARG A:64 , HIS A:132binding site for residue AU A 207
08AC8SOFTWAREGLU A:11 , HOH A:311 , HOH A:325 , HOH A:446 , HOH A:547binding site for residue CD A 208
09AC9SOFTWAREGLU A:53 , GLU A:56binding site for residue CD A 209
10AD1SOFTWAREASP A:80 , HOH A:495binding site for residue CD A 210
11AD2SOFTWAREHIS A:132 , HOH A:415binding site for residue CD A 211
12AD3SOFTWAREGLU A:130binding site for residue CD A 212
13AD4SOFTWAREGLU A:45 , HOH A:388 , HOH A:465binding site for residue CD A 213
14AD5SOFTWAREHOH A:301 , HOH A:427binding site for residue CD A 214
15AD6SOFTWAREGLU A:56 , GLU A:57 , GLU A:60 , HOH A:472binding site for residue CD A 215
16AD7SOFTWAREGLU A:53binding site for residue CD A 216
17AD8SOFTWAREGLN A:6 , ASN A:7 , HOH A:302 , HOH A:322 , HOH A:399binding site for residue SO4 A 217

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5IX6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5IX6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5IX6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5IX6)

(-) Exons   (0, 0)

(no "Exon" information available for 5IX6)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ix6 A   1 SSQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEYLFERLTLKH 173
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5IX6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5IX6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5IX6)

(-) Gene Ontology  (6, 6)

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  FRIL_HORSE | P02791
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FRIL_HORSE | P02791: 1aew 1dat 1gwg 1hrs 1ier 1ies 1xz1 1xz3 2g4h 2gyd 2v2i 2v2j 2v2l 2v2m 2v2n 2v2o 2v2p 2v2r 2v2s 2w0o 2z5p 2z5q 2z5r 2za6 2za7 2za8 2zg7 2zg8 2zg9 2zur 3af7 3af8 3af9 3f32 3f33 3f34 3f35 3f36 3f37 3f38 3f39 3fi6 3h7g 3noz 3np0 3np2 3o7r 3o7s 3rav 3rd0 3u90 3wvu 3wvv 3wvw 4de6 4v1w 4z3b 5axs 5czu 5e1u 5e2d 5erj 5erk 5gu0 5gu1 5gu2 5gu3 5hqo 5lg2 5mij 5mik

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5IX6)