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(-)Asym./Biol. Unit
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(-) Description

Title :  CRYSTAL STRUCTURE OF A FIMH*DSG COMPLEX FROM E.COLI F18
 
Authors :  R. P. Jakob, M. M. Sauer, R. Glockshuber, T. Maier
Date :  16 Jan 15  (Deposition) - 27 Jan 16  (Release) - 16 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.14
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Type I Pilus, Catch-Bond, Cell Adhesion, Lectin, Upec, Bacterial Adhesin, Uti, Mannose (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. M. Sauer, R. P. Jakob, J. Eras, S. Baday, D. Eris, G. Navarra, S. Berneche, B. Ernst, T. Maier, R. Glockshuber
Catch-Bond Mechanism Of The Bacterial Adhesin Fimh.
Nat Commun V. 7 10738 2016
PubMed-ID: 26948702  |  Reference-DOI: 10.1038/NCOMMS10738

(-) Compounds

Molecule 1 - FIMG PROTEIN
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: HM125
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 24-37
    Gene: ECP_4654
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
 
Molecule 2 - FIMH PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PTRC
    Expression System Strain: HM125
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 25-303
    Gene: ECP_4655
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4XOD)

(-) Sites  (0, 0)

(no "Site" information available for 4XOD)

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:3 -A:44
2A:161 -A:187

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Phe A:84 -Pro A:85
2Tyr A:175 -Pro A:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XOD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XOD)

(-) Exons   (0, 0)

(no "Exon" information available for 4XOD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:279
                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....ee......eeeee....eee..eeeeee....eeee........eeeee....ee.hhhh...eeeee..eeeee........eee.....ee..eeeee.......eeee....eeeeeeeeeee......eeeeeeeee...eeee...eee...eeeee.......ee...eeee...eeeeeeee......................eeeeeee..ee......eeeeee....ee..eeeeeee.......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xod A   1 FACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 279
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270         


Chain B from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 4xod B   1 ADVTITVNGKVVA  13
                                    10
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XOD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XOD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XOD)

(-) Gene Ontology  (4, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 4xod)
 
  Sites
(no "Sites" information available for 4xod)
 
  Cis Peptide Bonds
    Phe A:84 - Pro A:85   [ RasMol ]  
    Tyr A:175 - Pro A:176   [ RasMol ]  
 

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 Databases and Analysis Tools

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  4xod
    Family and Domain Information: ProDom | SYSTERS
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  FIMG_ECOLI | P08190
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  FIMH_ECOLI | P08191
    Comparative Protein Structure Models: ModBase
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FIMG_ECOLI | P08190: 3bfq 3bfw 3jwn 4j3o 4xo9 4xoa 5iqm 5iqn 5iqo
        FIMH_ECOLI | P08191: 1kiu 1klf 1qun 1tr7 1uwf 1ze3 2vco 3rfz 3zl1 3zl2 4att 4auj 4auu 4auy 4av0 4av4 4av5 4avh 4avi 4avj 4avk 4css 4cst 4j3o 4lov 4x50 4x5p 4x5q 4x5r 4xo8 4xo9 4xoa 4xob 5ab1 5abz 5cgb 5f2f 5f3f 5fx3 5jcq 5jcr 5l4t 5l4u 5l4v 5l4w 5l4x 5l4y 5mts

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4XOD)