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(-) Description

Title :  CRYSTAL STRUCTURE OF ALPHA V BETA 6 WITH PEPTIDE
 
Authors :  X. Dong, T. A. Springer
Date :  15 May 14  (Deposition) - 12 Nov 14  (Release) - 16 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  C,D,F  (1x)
Biol. Unit 2:  A,B,E  (1x)
Keywords :  Immune System, Cell Surface Receptor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Dong, N. E. Hudson, C. Lu, T. A. Springer
Structural Determinants Of Integrin Beta-Subunit Specificity For Latent Tgf-Beta
Nat. Struct. Mol. Biol. V. 21 1091 2014
PubMed-ID: 25383667  |  Reference-DOI: 10.1038/NSMB.2905

(-) Compounds

Molecule 1 - INTEGRIN ALPHA-V
    Chains: A, C
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S GNT I- CELL
    Expression System Common: HUMAN
    Expression System Plasmid: PCDNA 3.1 AND ET10
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Fragment: HEADPIECE, RESIDUES 31-625
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: VITRONECTIN RECEPTOR SUBUNIT ALPHA, INTEGRIN ALPHA V
 
Molecule 2 - INTEGRIN BETA-6
    Chains: B
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S GNT I- CELL
    Expression System Common: HUMAN
    Expression System Plasmid: PCDNA 3.1 AND ET10
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: INTEGRIN BETA 6
 
Molecule 3 - TRANSFORMING GROWTH FACTOR BETA 3
    Chains: E, F
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S GNT I- CELL
    Expression System Common: HUMAN
    Expression System Plasmid: PCDNA 3.1 AND ET10
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 7-17
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - INTEGRIN BETA-6
    Chains: D
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S GNT I- CELL
    Expression System Common: HUMAN
    Expression System Plasmid: PCDNA 3.1 AND ET10
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: INTEGRIN BETA 6

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x):   CD F
Biological Unit 2 (1x): AB  E 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 63)

Asymmetric Unit (8, 63)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2BMA4Ligand/IonBETA-D-MANNOSE
3CA12Ligand/IonCALCIUM ION
4MAN8Ligand/IonALPHA-D-MANNOSE
5MG2Ligand/IonMAGNESIUM ION
6NAG28Ligand/IonN-ACETYL-D-GLUCOSAMINE
7NHH2Mod. Amino AcidN'-{4-[2-(DIAMINOMETHYLIDENE)HYDRAZONO]CYCLOHEXYLIDEN}AMINOMETHANEHYDRAZONAMIDE
8SO46Ligand/IonSULFATE ION
Biological Unit 1 (6, 23)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4MAN4Ligand/IonALPHA-D-MANNOSE
5MG-1Ligand/IonMAGNESIUM ION
6NAG13Ligand/IonN-ACETYL-D-GLUCOSAMINE
7NHH1Mod. Amino AcidN'-{4-[2-(DIAMINOMETHYLIDENE)HYDRAZONO]CYCLOHEXYLIDEN}AMINOMETHANEHYDRAZONAMIDE
8SO42Ligand/IonSULFATE ION
Biological Unit 2 (5, 26)
No.NameCountTypeFull Name
1ACE-1Mod. Amino AcidACETYL GROUP
2BMA2Ligand/IonBETA-D-MANNOSE
3CA-1Ligand/IonCALCIUM ION
4MAN4Ligand/IonALPHA-D-MANNOSE
5MG-1Ligand/IonMAGNESIUM ION
6NAG15Ligand/IonN-ACETYL-D-GLUCOSAMINE
7NHH1Mod. Amino AcidN'-{4-[2-(DIAMINOMETHYLIDENE)HYDRAZONO]CYCLOHEXYLIDEN}AMINOMETHANEHYDRAZONAMIDE
8SO44Ligand/IonSULFATE ION

(-) Sites  (39, 39)

Asymmetric Unit (39, 39)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:230 , ASN A:232 , ASP A:234 , ILE A:236 , ASP A:238 , HOH A:4030BINDING SITE FOR RESIDUE CA A2001
02AC2SOFTWAREASP A:284 , ASN A:286 , ASP A:288 , TYR A:290 , ASP A:292 , HOH A:4045BINDING SITE FOR RESIDUE CA A2002
03AC3SOFTWAREASP A:349 , ASP A:351 , ASP A:353 , PHE A:355 , ASP A:357 , HOH A:4064BINDING SITE FOR RESIDUE CA A2003
04AC4SOFTWAREASP A:413 , ASP A:415 , ASN A:417 , TYR A:419 , ASP A:421 , HOH A:4071BINDING SITE FOR RESIDUE CA A2004
05AC5SOFTWARESER B:125 , SER B:127 , GLU B:223 , HOH B:4013 , HOH B:4014 , HOH B:4027 , ASP E:243BINDING SITE FOR RESIDUE MG B2001
06AC6SOFTWAREGLU B:162 , ASN B:218 , ASP B:220 , PRO B:222 , GLU B:223BINDING SITE FOR RESIDUE CA B2002
07AC7SOFTWARESER B:127 , ASP B:130 , ASP B:131 , LYS B:338 , HOH B:4016BINDING SITE FOR RESIDUE CA B2003
08AC8SOFTWAREASP C:413 , ASP C:415 , ASN C:417 , TYR C:419 , ASP C:421 , HOH C:4040BINDING SITE FOR RESIDUE CA C2001
09AC9SOFTWAREASP C:349 , ASP C:351 , ASP C:353 , PHE C:355 , ASP C:357BINDING SITE FOR RESIDUE CA C2002
10BC1SOFTWAREASP C:230 , ASN C:232 , ASP C:234 , ILE C:236 , ASP C:238 , HOH C:4019BINDING SITE FOR RESIDUE CA C2003
11BC2SOFTWAREASP C:284 , ASN C:286 , ASP C:288 , TYR C:290 , ASP C:292 , HOH C:4027BINDING SITE FOR RESIDUE CA C2004
12BC3SOFTWAREGLU C:448 , TYR C:450 , ARG C:476 , BMA C:3460BINDING SITE FOR RESIDUE MAN C3461
13BC4SOFTWAREASP D:123 , SER D:125 , SER D:127 , GLU D:223 , HOH D:4004 , HOH D:4005 , HOH D:4011 , ASP F:243BINDING SITE FOR RESIDUE MG D2001
14BC5SOFTWARESER D:127 , ASP D:130 , LYS D:338 , HOH D:4006BINDING SITE FOR RESIDUE CA D2002
15BC6SOFTWAREGLU D:162 , ASN D:218 , ASP D:220 , PRO D:222 , GLU D:223BINDING SITE FOR RESIDUE CA D2003
16BC7SOFTWAREPRO A:488 , ARG A:489BINDING SITE FOR RESIDUE SO4 A1595
17BC8SOFTWAREASN C:77 , PHE C:88 , LYS C:89 , SER C:90BINDING SITE FOR RESIDUE SO4 C1595
18BC9SOFTWARESER C:528 , GLY C:531 , LEU C:532BINDING SITE FOR RESIDUE SO4 C1596
19CC1SOFTWAREHIS B:277BINDING SITE FOR RESIDUE SO4 B1475
20CC2SOFTWAREGLY A:13 , GLU A:15 , ARG A:398BINDING SITE FOR RESIDUE SO4 A1596
21CC3SOFTWAREASN A:77 , PHE A:88 , LYS A:89 , SER A:90BINDING SITE FOR RESIDUE SO4 A1597
22CC4SOFTWAREGLU A:15 , GLY A:16 , LYS A:42 , ASN A:44 , GLU A:52 , HOH A:4004 , HOH A:4086 , HOH A:4087BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3044 THROUGH NAG A3045 BOUND TO ASN A 44
23CC5SOFTWAREASN A:232 , ASP A:257 , LYS A:259 , ASN A:260 , HOH A:4033 , HOH A:4088BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3260 THROUGH MAN A3263 BOUND TO ASN A 260
24CC6SOFTWAREGLN A:214 , PHE A:217 , TYR A:254 , SER A:263 , LEU A:264 , ASN A:266 , HOH A:4028BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3266 THROUGH MAN A3271 BOUND TO ASN A 266
25CC7SOFTWAREPRO A:451 , ASN A:458 , THR A:460 , CYS A:472 , PHE A:473 , ASN A:474 , HOH C:4052BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3458 THROUGH NAG A3459 BOUND TO ASN A 458
26CC8SOFTWAREGLN A:494 , SER A:522 , ASN A:524 , ASP A:564BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3524 THROUGH NAG A3525 BOUND TO ASN A 524
27CC9SOFTWAREPHE A:558 , PRO A:583 , ASN A:585BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A3585 THROUGH NAG A3586 BOUND TO ASN A 585
28DC1SOFTWAREASN B:80 , SER B:82 , ASP B:83BINDING SITE FOR MONO-SACCHARIDE NAG B3080 BOUND TO ASN B 80
29DC2SOFTWAREASN B:243 , HOH B:4063BINDING SITE FOR MONO-SACCHARIDE NAG B3243 BOUND TO ASN B 243
30DC3SOFTWARESER A:305 , GLY B:368 , ASN B:370 , HOH B:4064 , LYS D:214BINDING SITE FOR MONO-SACCHARIDE NAG B3370 BOUND TO ASN B 370
31DC4SOFTWAREGLU C:15 , GLY C:16 , LYS C:42 , ASN C:44 , GLU C:52 , HOH C:4051BINDING SITE FOR MONO-SACCHARIDE NAG C3044 BOUND TO ASN C 44
32DC5SOFTWAREASP C:234 , ASP C:257 , LYS C:259 , ASN C:260BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C3260 THROUGH NAG C3261 BOUND TO ASN C 260
33DC6SOFTWAREGLN C:214 , PHE C:217 , TYR C:254 , SER C:263 , LEU C:264 , ASN C:266BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C3266 THROUGH MAN C3271 BOUND TO ASN C 266
34DC7SOFTWAREGLU A:448 , ARG A:588 , ASN C:458 , THR C:460 , CYS C:472 , ASN C:474 , MAN C:3461BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C3458 THROUGH BMA C3460 BOUND TO ASN C 458
35DC8SOFTWAREGLN C:494 , SER C:522 , ASN C:524BINDING SITE FOR MONO-SACCHARIDE NAG C3524 BOUND TO ASN C 524
36DC9SOFTWAREPHE C:558 , PRO C:583 , ASN C:585BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C3585 THROUGH NAG C3586 BOUND TO ASN C 585
37EC1SOFTWAREASN D:31 , GLN D:54BINDING SITE FOR MONO-SACCHARIDE NAG D3031 BOUND TO ASN D 31
38EC2SOFTWAREASN D:80 , SER D:82 , HOH D:4022BINDING SITE FOR MONO-SACCHARIDE NAG D3080 BOUND TO ASN D 80
39EC3SOFTWAREASN D:243BINDING SITE FOR MONO-SACCHARIDE NAG D3243 BOUND TO ASN D 243

(-) SS Bonds  (34, 34)

Asymmetric Unit
No.Residues
1A:59 -A:67
2A:108 -A:128
3A:142 -A:155
4A:400 -B:270
5A:461 -A:472
6A:478 -A:535
7B:6 -B:24
8B:14 -B:437
9B:17 -B:42
10B:27 -B:53
11B:180 -B:187
12B:235 -B:276
13B:377 -B:389
14B:409 -B:435
15B:439 -B:459
16B:450 -B:462
17B:464 -B:473
18C:59 -C:67
19C:108 -C:128
20C:142 -C:155
21C:400 -D:270
22C:461 -C:472
23C:478 -C:535
24D:6 -D:24
25D:14 -D:437
26D:17 -D:42
27D:27 -D:53
28D:180 -D:187
29D:235 -D:276
30D:377 -D:389
31D:409 -D:435
32D:439 -D:459
33D:450 -D:462
34D:464 -D:473

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Tyr A:450 -Pro A:451
2Ala B:88 -Pro B:89
3Ser B:166 -Pro B:167
4Ile B:183 -Pro B:184
5Tyr C:450 -Pro C:451
6Ala D:88 -Pro D:89
7Ser D:166 -Pro D:167
8Ile D:183 -Pro D:184

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UM9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UM9)

(-) Exons   (0, 0)

(no "Exon" information available for 4UM9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:594
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeee..........eeee........eeeeee..............eeeeee......eee.........eee..ee.ee.........eeee..eeeeee...ee............eeeeee..eeeee.....................eee....eeeeee.hhhhhh.eeeeeehhhhhhh.............ee....hhhhh.......eeee........eeeeee.hhhhhh.eeeee......eeeeee...........eeee........eeeeee...eee.....eee..eeeeeee.....eeeeeee...........eeeee........eeeeee...hhhhh.eeeeeeee..ee.....eeee...........eeeeeeeee........eeeeee....eeeee....eeeeeeeeeee..ee.................eeeeeeeeeeee......eeeeeeeee............eee......eeeeeeeee.....eeeeeeeee.hhhhh......eeeeeeeee.............ee......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4um9 A   1 FNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSCPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILL 594
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590    


Chain B from PDB  Type:PROTEIN  Length:448
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh......ee..eehhhhhhhhh...........eeeeee..........hhhhh..ee..eeeeee.....eeeeeeee......eeeeeeee.hhhhhhhhhhh.hhhhhhhhhhhhhh..eeeeeeee...........hhhhhhh..............eeeeeeee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhh.....eeeeeeee.....hhhhhhhhh..........................hhhhhhhhhhhh.eeeeeeehhhhhhhhhhhhh.....eeee......hhhhhhhhhhhhhh..eeeeeee.....eeeeeee......ee...ee.......eeeeeeeee........eeeeeee......eeeeeee.................eeee..eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4um9 B   5 GCALGGTCEDCLLIGPQCAWCRCDTPANLLAKGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVCPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVGLGDALELLVSPECNCDCQVNSSKCHNGNGSFQCGVCACHPGPRCE 474
                                 || 16        26||      49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439||     453       463  ||    
                                10|            27|                                                                                                                                                                                                                                                                                                                                                                                                            440|                  466|    
                                 13             41                                                                                                                                                                                                                                                                                                                                                                                                             445                   470    


Chain C from PDB  Type:PROTEIN  Length:589
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee..........eeee.....eeeeee..............eeeeee......eee.........eee..ee.ee.........eeee..eeeeee...ee............eeeeee..eeeee.....................eee....eeeeee.hhhhhh.eeeeeehhhhhhh.............ee....hhhhh.......eeee........eeeeee.hhhhhh.eeeee......eeeeee...........eeee........eeeeee...eee.....eee..eeeeeee.....eeeeeee...........eeeee........eeeeee...hhhhh.eeeeeeee..ee.....eeee..............eeeeee........eeeeeehhh.eeeeeee..eeeeeeeeeee..ee.................eeeeeeeeeeee......eeeeeeeee..........eee......eeeeeeeee.....eeeeeeeee.hhhhh......eeeeeeeeehhhhhh.......ee......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4um9 C   1 FNLDVDSPAEYSGPEGSYFGFAVDFFVPSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSCPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDKLKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILL 594
                                    10        20       |33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503|      515       525       535       545       555       565       575       585         
                                                      28|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    503|                                                                                        
                                                       32                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     506                                                                                        


Chain D from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhh.....ee........hhhhhhhhh.....ee....eeeeee..........hhhhh..ee..eeeeee.....eeeeeeee......eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee...........hhhhhhh..............eeeeeeee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhh.....eeeeeeee.....hhhhhhhhh..........................hhhhhhhhhhhh.eeeeeeehhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhh..eeeeeee.....eeeeeee.....eee...ee.......eeeeeeeee........eeeeeee......eeeeeee.....................eee..eee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4um9 D   5 GCALGGAETCEDCLLIGPQCAWCATENERCDTPANLLAKGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVCPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVGLGDALELLVSPECNCDCQKVEVNSSKCHNGNGSFQCGVCACPRCE 474
                                    14        24      ||42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       443       453       463||   
                                                     31|                                                                                                                                                                                                                                                                                                                                                                                                              441|                  464|   
                                                      40                                                                                                                                                                                                                                                                                                                                                                                                               443                   471   


Chain E from PDB  Type:PROTEIN  Length:11
                                           
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author ....hhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                 4um9 E 240 GRGDLGRLKKx 250
                                   249|
                                    250-NHH


Chain F from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ......hhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 4um9 F 238 xHGRGDLGRLKKx 250
                            |      247  |
                            |         250-NHH
                          238-ACE
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 Related Entries

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        ITAV_HUMAN | P06756: 1jv2 1l5g 1m1x 1u8c 3ije 4g1e 4g1m 4mmx 4mmy 4mmz 4o02 4um8 5ffg 5ffo 5nem 5ner 5net 5neu
        ITB6_HUMAN | P18564: 1lh9 4um8 5ffg 5ffo 5nem 5ner 5net 5neu
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(-) Related Entries Specified in the PDB File

4um8 CRYSTAL STRUCTURE OF ALPHA V BETA 6