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(-) Description

Title :  GAMMA SUBUNIT OF THE TRANSLATION INITIATION FACTOR 2 FROM SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDP
 
Authors :  O. S. Nikonov, E. A. Stolboushkina, V. I. Arkhipova, A. G. Gabdulkhakov A. D. Nikulin, A. M. Lazopulo, S. M. Lazopulo, M. B. Garber, S. V. Nikono
Date :  01 Aug 13  (Deposition) - 28 Aug 13  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  Aif2, Aif2 Gamma Subunit, G-Protein, Translation, Translation Initiation, Protein Biosynthesis, Rna-Binding, Gtp-Binding, Nucleotide-Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  O. Nikonov, E. Stolboushkina, V. Arkhipova, O. Kravchenko, S. Nikonov, M. Garber
Conformational Transitions In The Gamma Subunit Of The Archaeal Translation Initiation Factor 2
Acta Crystallogr. , Sect. D V. 70 658 2014
PubMed: search  |  Reference-DOI: 10.1107/S1399004713032240

(-) Compounds

Molecule 1 - TRANSLATION INITIATION FACTOR 2 SUBUNIT GAMMA
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: EIF2G
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 273057
    Strain: P2
    Synonym: AIF2-GAMMA, EIF-2-GAMMA

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 14)

Asymmetric Unit (3, 14)
No.NameCountTypeFull Name
1GDP6Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG7Ligand/IonMAGNESIUM ION
3PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 5 (2, 2)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO41Ligand/IonPHOSPHATE ION
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
3PO4-1Ligand/IonPHOSPHATE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREVAL A:18 , ASP A:19 , GLY A:21 , LYS A:22 , THR A:23 , THR A:24 , ASN A:149 , LYS A:150 , ASP A:152 , VAL A:153 , SER A:184 , ALA A:185 , LEU A:186 , MG A:502 , HOH A:632 , HOH A:646 , HOH A:657BINDING SITE FOR RESIDUE GDP A 501
02AC2SOFTWARETHR A:23 , GDP A:501 , HOH A:632 , HOH A:644 , HOH A:645 , HOH A:646BINDING SITE FOR RESIDUE MG A 502
03AC3SOFTWAREVAL B:18 , ASP B:19 , HIS B:20 , GLY B:21 , LYS B:22 , THR B:23 , THR B:24 , ASN B:149 , LYS B:150 , ASP B:152 , VAL B:153 , SER B:184 , ALA B:185 , LEU B:186 , MG B:502 , HOH B:622 , HOH B:645 , HOH B:650BINDING SITE FOR RESIDUE GDP B 501
04AC4SOFTWARETHR B:23 , GDP B:501 , HOH B:622 , HOH B:625 , HOH B:645BINDING SITE FOR RESIDUE MG B 502
05AC5SOFTWAREASP C:19 , HIS C:20 , GLY C:21 , LYS C:22 , THR C:23 , THR C:24 , ASN C:149 , LYS C:150 , ASP C:152 , SER C:184 , ALA C:185 , LEU C:186 , MG C:502 , HOH C:634 , HOH C:643 , HOH C:655BINDING SITE FOR RESIDUE GDP C 501
06AC6SOFTWARETHR C:23 , GDP C:501 , HOH C:634 , HOH C:643 , HOH C:655 , HOH C:665BINDING SITE FOR RESIDUE MG C 502
07AC7SOFTWARETHR C:54 , THR C:70 , GLU C:71 , HOH C:607 , HOH C:630BINDING SITE FOR RESIDUE MG C 503
08AC8SOFTWAREARG A:404 , ASP D:19 , GLY D:21 , LYS D:22 , THR D:23 , THR D:24 , ASN D:149 , LYS D:150 , ASP D:152 , VAL D:153 , SER D:184 , ALA D:185 , LEU D:186 , MG D:502 , HOH D:617 , HOH D:631 , HOH D:650BINDING SITE FOR RESIDUE GDP D 501
09AC9SOFTWARETHR D:23 , GDP D:501 , HOH D:617 , HOH D:631 , HOH D:632BINDING SITE FOR RESIDUE MG D 502
10BC1SOFTWAREHIS E:17 , ASP E:19 , HIS E:20 , GLY E:21 , LYS E:22 , THR E:23 , THR E:24 , ASN E:149 , LYS E:150 , ASP E:152 , VAL E:153 , SER E:184 , ALA E:185 , LEU E:186 , MG E:502 , HOH E:608 , HOH E:621 , HOH E:637 , HOH E:638BINDING SITE FOR RESIDUE GDP E 501
11BC2SOFTWARETHR E:23 , GDP E:501 , HOH E:621 , HOH E:636 , HOH E:637 , HOH E:638BINDING SITE FOR RESIDUE MG E 502
12BC3SOFTWARELEU B:326 , TRP B:327 , ASN B:328 , TYR E:206 , ARG E:207 , ASP E:208BINDING SITE FOR RESIDUE PO4 E 503
13BC4SOFTWAREASP F:19 , HIS F:20 , GLY F:21 , LYS F:22 , THR F:23 , THR F:24 , ASN F:149 , LYS F:150 , ASP F:152 , VAL F:153 , SER F:184 , ALA F:185 , LEU F:186 , MG F:502 , HOH F:619BINDING SITE FOR RESIDUE GDP F 501
14BC5SOFTWARETHR F:23 , GDP F:501 , HOH F:606 , HOH F:615 , HOH F:619BINDING SITE FOR RESIDUE MG F 502

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1A:59 -A:74
2A:62 -A:77
3B:59 -B:74
4B:62 -B:77
5C:59 -C:74
6C:62 -C:77
7D:59 -D:74
8D:62 -D:77
9E:59 -E:74
10E:62 -E:77
11F:59 -F:74
12F:62 -F:77

(-) Cis Peptide Bonds  (21, 21)

Asymmetric Unit
No.Residues
1Ser A:35 -Lys A:36
2Lys A:64 -Pro A:65
3Phe A:124 -Pro A:125
4Leu A:256 -Pro A:257
5Lys B:64 -Pro B:65
6Phe B:124 -Pro B:125
7Leu B:256 -Pro B:257
8Lys C:64 -Pro C:65
9Phe C:124 -Pro C:125
10Leu C:256 -Pro C:257
11Lys D:64 -Pro D:65
12Phe D:124 -Pro D:125
13Leu D:256 -Pro D:257
14Lys E:64 -Pro E:65
15Phe E:124 -Pro E:125
16Leu E:256 -Pro E:257
17Lys F:42 -Arg F:43
18Arg F:43 -Gly F:44
19Lys F:64 -Pro F:65
20Phe F:124 -Pro F:125
21Leu F:256 -Pro F:257

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M0L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M0L)

(-) Exons   (0, 0)

(no "Exon" information available for 4M0L)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:412
                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4m0la1 A:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                                d4m0la2 A:207-320 Initiation factor eIF2 gamma subunit, domain II                                                 d4m0la3 A:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee....hhhhhhhhhhh................eeeeeeeee.........ee..............eeeeeeeeee..hhhhhhhhhhh.......eeeeee......hhhhhhhhhhhhhh....eeeeeehhhhh..hhhhhhhhhhhhhhh.hhhhhh.eee.......hhhhhhhhhhhhh...........eeeeeeee...............eeeeeeee..ee...eeeeeeeeeee....eeeeeeeeeeeeeee..eee.ee.....eeeee..hhhhhh.......eeee......eeeeeeeeeee....................eeeee.....eeeeeeee...eeeeeeeeeee......eeeeeeee..eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m0l A   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31        41||      53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413  
                                                                   42|                                                                                                                                                                                                                                                                                                                                                                                  
                                                                    45                                                                                                                                                                                                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:396
                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4m0lb1 B:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                        d4m0lb2 B:207-320 Initiation factor eIF2 gamma subunit, domain II                                         d4m0lb3 B:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeeeee....hhhhhhhhhhh..........eeeeeee.........ee....hhhhh.....eeeeeeeee...hhhhhhhhhhh.......eeeeee......hhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhhhhh........eee.......hhhhhhhhhhhhh...........eeeeeeee.......eeeeeeee..ee...eeeeeeeeeeee..eeeeeeeeee..eee....ee.ee.....eeee...hhhhhhhhh....eeee......eeeeeeeeeee....................eeeee.....eeeeeeee...eeeeeeeeeee.....eeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4m0l B   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31  ||    51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221   ||  239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409      
                                                           34|                                                                                                                                                                                 225|                                                                                                                                                                                     
                                                            45                                                                                                                                                                                  234                                                                                                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:406
                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4m0lc1 C:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                          d4m0lc2 C:207-320 Initiation factor eIF2 gamma subunit, domain II                                                 d4m0lc3 C:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeee.....hhhhhhhhhhh..........eeeeeeeee.........ee....hhhhh.....eeeeeeeeee..hhhhhhhhhhh......eeeeeee......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh.........ee.......hhhhhhhhhhhhh...........eeeeeeee...............eeeeeeee..ee...eeeeeeeeeee....eeeeeeeee..eeee..eee.ee.....eeee...hhhhhh.......eeee......eeeeeeeeeee....................eeeee.....eeeee......eeeeeeeeeee.......eeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m0l C   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31     || 49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409      
                                                              37|                                                                                                                                                                                                                                                                                                                                                                                 
                                                               46                                                                                                                                                                                                                                                                                                                                                                                 


Chain D from PDB  Type:PROTEIN  Length:405
                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains d4m0ld1 D:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                         d4m0ld2 D:207-320 Initiation factor eIF2 gamma subunit, domain II                                                 d4m0ld3 D:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeee.....hhhhhhhhhhh.........eeeeeeeee.........ee..............eeeeeeeeee..hhhhhhhhhhhh.....eeeeeee......hhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhhhhhhhh.........ee.......hhhhhhhhhhhhh...........eeeeeeee.......hhhhh...eeeeeeee..ee....eeeeeeeeeee..eeeeeeeee...eeee..eee.ee.....eeee...hhhhh........eeee......eeeeeeeeeee.....................eeee.....eee.........eeeeeeeeee.....eeeeeeeee..eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m0l D   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31    ||  50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                             36|                                                                                                                                                                                                                                                                                                                                                                                 
                                                              46                                                                                                                                                                                                                                                                                                                                                                                 


Chain E from PDB  Type:PROTEIN  Length:405
                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains d4m0le1 E:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                         d4m0le2 E:207-320 Initiation factor eIF2 gamma subunit, domain II                                                 d4m0le3 E:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee....hhhhhhhhhhh.........eeeeeeeee.........ee..............eeeeeeeeee..hhhhhhhhhhh......eeeeeee......hhhhhhhhhhhhhhh...eeeeeehhhhh..hhhhhhhhhhhhhhh........ee........hhhhhhhhhhhhh...........eeeeeeee...............eeeeeeee..ee...eeeeeeeeeeee..eeeeeeeeeeeeeeee......ee....eeeeee..hhhhhh.......eeee......eeeeeeeeeee....................eeeeee..eeeeeeeeee....eeeeeeeeee.....eeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m0l E   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31    ||  50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                             36|                                                                                                                                                                                                                                                                                                                                                                                 
                                                              46                                                                                                                                                                                                                                                                                                                                                                                 


Chain F from PDB  Type:PROTEIN  Length:414
                                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4m0lf1 F:2-206 Initiation factor eIF2 gamma subunit, N-terminal (G) domain                                                                                                                                  d4m0lf2 F:207-320 Initiation factor eIF2 gamma subunit, domain II                                                 d4m0lf3 F:321-415 Initiation factor eIF2 gamma subunit                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeeee.....hhhhhhhhhh...................eeeeeeeee.........................eeeeeeeeee..hhhhhhhhhhhh.....eeeeeee......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh.........ee........hhhhhhhhhhhh...........eeeeeeee...............eeeeeeee..ee...eeeeeeeeeeee..eeeeeeeeeeeeeeee..ee..ee.....eeeee..hhhhhh.......eeee......eeeeeeee.ee....................eeeee.....eeeeeeee...eeeeeeeeeee.......eeeeeee..eeeeeeee.ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4m0l F   2 AWPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLTKADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 415
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 18)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4M0L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4M0L)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)

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Asymmetric Unit
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IF2G_SULSO | Q980A5: 2aho 2plf 2pmd 2qmu 2qn6 3cw2 3i1f 3pen 3qsy 3sjz 3v11 4m2l 4m4s 4m53 4nbs 4qfm 4qhy 4rcy 4rcz 4rd0 4rd1 4rd2 4rd3 4rd4 4rd6 4rjl 5dsz 5jb3 5jbh

(-) Related Entries Specified in the PDB File

4m2l 4m4s 4m53