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(-) Description

Title :  STRUCTURE OF BORRELIA BURGDORFERI OUTER SURFACE PROTEIN E IN COMPLEX WITH FACTOR H DOMAINS 19-20
 
Authors :  A. Bhattacharjee, R. Kolodziejczyk, T. Kajander, A. Goldman, T. S. Jok
Date :  05 Feb 13  (Deposition) - 15 May 13  (Release) - 10 Jul 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.83
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Beta Barrel, Immune Evasion, Complement Regulator Binding, Fh Binding, Membrane, Immune System, Erp Paralog, Lyme Disease, Bbcrasp-3 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Bhattacharjee, J. S. Oeemig, R. Kolodziejczyk, T. Meri, T. Kajander, M. J. Lehtinen, H. Iwai, T. S. Jokiranta, A. Goldman
Structural Basis For Complement Evasion By Lyme Disease Pathogen Borrelia Burgdorferi
J. Biol. Chem. V. 288 18685 2013
PubMed-ID: 23658013  |  Reference-DOI: 10.1074/JBC.M113.459040

(-) Compounds

Molecule 1 - OUTER SURFACE PROTEIN E
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-2T
    Expression System Strain: BL21(DE3)RIL
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 21-171
    Gene: OSPE
    Organism Scientific: BORRELIA BURGDORFERI
    Organism Taxid: 521007
    Strain: N40
 
Molecule 2 - COMPLEMENT FACTOR H
    Chains: B
    Engineered: YES
    Expression System: KOMAGATAELLA PASTORIS
    Expression System Plasmid: PPICZALPHAB
    Expression System Taxid: 4922
    Expression System Vector Type: PLASMID
    Fragment: FH DOMAINS 19-20, UNP RESIDUES 1103-1231
    Gene: CFH
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: H FACTOR 1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:66 , GLU A:68 , ARG B:1182 , HOH B:1408BINDING SITE FOR RESIDUE SO4 B 1301

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1B:1109 -B:1152
2B:1138 -B:1163
3B:1167 -B:1218
4B:1201 -B:1228

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Lys A:150 -Asn A:151
2Thr B:1106 -Gly B:1107

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4J38)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4J38)

(-) Exons   (0, 0)

(no "Exon" information available for 4J38)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:132
                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee........eeeeeeeeee..eeeeeeee..eeeeeeeehhhhhhhhhhhhhhheeee..ee.....hhhhh..ee..eeeeeeeee..eeeeeee............eeeeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4j38 A   40 EFSKFTVKIKNKDKSGNWTDLGDLVVRKEENGIDTGLNAGGHSATFFSLEEEVVNNFVKVMTEGGSFKTSLYYGYKEEQSVINGIQNKEIITKIEKIDGTEYITFSGDKIKNSGDKVAEYAISLEELKKNLK  171
                                    49        59        69        79        89        99       109       119       129       139       149       159       169  


Chain B from PDB  Type:PROTEIN  Length:123
                                                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eee............eeeeee....eee...eeeee..ee....eee..eeehhhhhhhh.eee.......eee....eeeeee.............eee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                4j38 B 1106 TGKCGPPPPIDNGGITSFPLSVYAPASSVEYQCANLYQLEGNKRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC 1228
                                  1115      1125      1135      1145      1155      1165      1175      1185      1195      1205      1215      1225
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4J38)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4J38)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4J38)

(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)

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  4j38
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  CFAH_HUMAN | P08603
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CFAH_HUMAN | P08603: 1fhc 1haq 1hcc 1hfh 1hfi 1kov 2bzm 2g7i 2ic4 2jgw 2jgx 2kms 2qfg 2qfh 2rlp 2rlq 2uwn 2v8e 2w80 2w81 2wii 2xqw 3gau 3gav 3gaw 3kxv 3kzj 3oxu 3r62 3rj3 3sw0 4ayd 4aye 4ayi 4aym 4b2r 4b2s 4k12 4ont 4zh1 5o32 5o35

(-) Related Entries Specified in the PDB File

2g7i FACTOR H DOMAINS 19-20
2m4f BORRELIA BURGDORFERI OUTER SURFACE PROTEIN E
2xqw STRUCTURE OF FACTOR H DOMAINS 19-20 IN COMPLEX WITH COMPLEMENT C3D
3kxv FACTOR H DOMAINS 19-20 Q1139A VARIANT
3kzj FACTOR H DOMAINS 19-20 R1203A VARIANT