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(-) Description

Title :  HIGH-RESOLUTION STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
 
Authors :  A. Volbeda, L. Martin, E. Barbier, O. Gutierrez-Sanz, A. L. Delacey, P. P. Liebgott, S. Dementin, M. Rousset, J. C. Fontecilla-Camps
Date :  24 Jun 14  (Deposition) - 29 Oct 14  (Release) - 21 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.22
Chains :  Asym. Unit :  A,B,Q,R
Biol. Unit 1:  B,R  (1x)
Biol. Unit 2:  A,Q  (1x)
Keywords :  Oxidoreductase, Nife-Site, Ni-A State, Sulfenate, Ni-Sox State, Persulfide (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Volbeda, L. Martin, E. Barbier, O. Gutierrez-Sanz, A. L. De Lacey, P. Liebgott, S. Dementin, M. Rousset, J. C. Fontecilla-Camps
Crystallographic Studies Of [Nife]-Hydrogenase Mutants: Towards Consensus Structures For The Elusive Unready Oxidized States.
J. Biol. Inorg. Chem. V. 20 11 2015
PubMed-ID: 25315838  |  Reference-DOI: 10.1007/S00775-014-1203-9
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYDROGENASE (NIFE) SMALL SUBUNIT HYDA
    Chains: A, B
    EC Number: 1.12.2.1
    Engineered: YES
    Expression System: DESULFOVIBRIO FRUCTOSOVORANS
    Expression System Taxid: 878
    Fragment: RESIDUES 50-314
    Organism Scientific: DESULFOVIBRIO FRUCTOSOVORANS
    Organism Taxid: 878
    Synonym: NIFE-HYDROGENASE SMALL SUBUNIT
 
Molecule 2 - NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT
    Chains: Q, R
    EC Number: 1.12.2.1
    Engineered: YES
    Expression System: DESULFOVIBRIO FRUCTOSOVORANS
    Expression System Taxid: 878
    Fragment: RESIDUES 2-549
    Mutation: YES
    Organism Scientific: DESULFOVIBRIO FRUCTOSOVORANS
    Organism Taxid: 878
    Synonym: NIFE-HYDROGENASE LARGE SUBUNIT

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABQR
Biological Unit 1 (1x):  B R
Biological Unit 2 (1x): A Q 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (12, 33)

Asymmetric Unit (12, 33)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2CSS2Mod. Amino AcidS-MERCAPTOCYSTEINE
3CSX2Mod. Amino AcidS-OXY CYSTEINE
4F3S2Ligand/IonFE3-S4 CLUSTER
5FCO2Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
6GLY3Mod. Amino AcidGLYCINE
7GOL11Ligand/IonGLYCEROL
8H2S1Ligand/IonHYDROSULFURIC ACID
9MG2Ligand/IonMAGNESIUM ION
10NI2Ligand/IonNICKEL (II) ION
11SF44Ligand/IonIRON/SULFUR CLUSTER
12SOT1Ligand/IonMORPHOLINE-4-SULFONIC ACID
Biological Unit 1 (9, 18)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CSS1Mod. Amino AcidS-MERCAPTOCYSTEINE
3CSX1Mod. Amino AcidS-OXY CYSTEINE
4F3S1Ligand/IonFE3-S4 CLUSTER
5FCO1Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
6GLY2Mod. Amino AcidGLYCINE
7GOL8Ligand/IonGLYCEROL
8H2S1Ligand/IonHYDROSULFURIC ACID
9MG-1Ligand/IonMAGNESIUM ION
10NI-1Ligand/IonNICKEL (II) ION
11SF42Ligand/IonIRON/SULFUR CLUSTER
12SOT1Ligand/IonMORPHOLINE-4-SULFONIC ACID
Biological Unit 2 (7, 10)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2CSS1Mod. Amino AcidS-MERCAPTOCYSTEINE
3CSX1Mod. Amino AcidS-OXY CYSTEINE
4F3S1Ligand/IonFE3-S4 CLUSTER
5FCO1Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
6GLY1Mod. Amino AcidGLYCINE
7GOL3Ligand/IonGLYCEROL
8H2S-1Ligand/IonHYDROSULFURIC ACID
9MG-1Ligand/IonMAGNESIUM ION
10NI-1Ligand/IonNICKEL (II) ION
11SF42Ligand/IonIRON/SULFUR CLUSTER
12SOT-1Ligand/IonMORPHOLINE-4-SULFONIC ACID

(-) Sites  (29, 29)

Asymmetric Unit (29, 29)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:184 , CYS A:187 , ARG A:189 , LEU A:190 , CYS A:212 , LEU A:213 , CYS A:218BINDING SITE FOR RESIDUE SF4 A1265
02AC2SOFTWARETHR A:223 , ASN A:225 , CYS A:227 , PHE A:232 , TRP A:237 , CYS A:245 , LEU A:246 , CYS A:248 , LYS Q:225 , GLN Q:230BINDING SITE FOR RESIDUE F3S A1266
03AC3SOFTWAREGLU A:16 , CYS A:17 , CYS A:20 , THR A:113 , CYS A:114 , GLY A:146 , CYS A:147 , PRO A:148 , ARG Q:70BINDING SITE FOR RESIDUE SF4 A1267
04AC4SOFTWAREASP A:82 , GLN A:85 , HOH A:2060 , HOH A:2069 , HOH A:2078 , GLN B:129 , LYS B:131 , THR Q:360 , HOH Q:2094BINDING SITE FOR RESIDUE GOL A1268
05AC5SOFTWAREGLN A:62 , HOH A:2048 , HOH A:2053 , HOH A:2056 , HOH A:2141BINDING SITE FOR RESIDUE GOL A1269
06AC6SOFTWAREGLY B:107 , ILE B:108 , LYS B:140 , HOH B:2227 , HOH B:2296 , HOH B:2306BINDING SITE FOR RESIDUE GLY B 301
07AC7SOFTWAREHIS B:184 , CYS B:187 , ARG B:189 , LEU B:190 , CYS B:212 , LEU B:213 , CYS B:218 , PRO B:221BINDING SITE FOR RESIDUE SF4 B1265
08AC8SOFTWARETHR B:223 , ASN B:225 , CYS B:227 , PHE B:232 , TRP B:237 , CYS B:245 , LEU B:246 , CYS B:248 , LYS R:225 , GLN R:230BINDING SITE FOR RESIDUE F3S B1266
09AC9SOFTWAREGLU B:16 , CYS B:17 , CYS B:20 , THR B:113 , CYS B:114 , GLY B:146 , CYS B:147 , PRO B:148 , ARG R:70BINDING SITE FOR RESIDUE SF4 B1267
10BC1SOFTWARETYR B:214 , PRO B:221BINDING SITE FOR RESIDUE SOT B1268
11BC2SOFTWAREGLU B:205 , LYS B:209 , GOL B:1272 , HOH B:2043 , HOH B:2163 , HOH B:2255 , HOH B:2305 , ASN R:454BINDING SITE FOR RESIDUE GOL B1269
12BC3SOFTWAREH2S B:1271 , HOH B:2046 , HOH B:2075 , HOH B:2090 , HOH B:2143 , HOH B:2155 , HOH B:2290BINDING SITE FOR RESIDUE GOL B1270
13BC4SOFTWAREHIS B:5 , ASP B:68 , GOL B:1270 , HOH B:2082 , HOH B:2090 , HOH B:2143 , GLN R:175BINDING SITE FOR RESIDUE H2S B1271
14BC5SOFTWAREILE Q:24 , GLU Q:25 , HIS Q:118 , ASP Q:541 , HOH Q:2005 , HOH Q:2006 , HOH Q:2071 , HOH Q:2078BINDING SITE FOR RESIDUE GLY Q 601
15BC6SOFTWARECSX Q:75 , VAL Q:78 , HIS Q:79 , ALA Q:474 , PRO Q:475 , ARG Q:476 , LEU Q:479 , VAL Q:497 , PRO Q:498 , SER Q:499 , CYS Q:546 , NI Q:1551 , HOH Q:2001BINDING SITE FOR RESIDUE FCO Q1550
16BC7SOFTWARECYS Q:72 , CSX Q:75 , CSS Q:543 , CYS Q:546 , FCO Q:1550 , HOH Q:2001BINDING SITE FOR RESIDUE NI Q1551
17BC8SOFTWAREGLU Q:53 , LEU Q:495 , HIS Q:549 , HOH Q:2002 , HOH Q:2003 , HOH Q:2004BINDING SITE FOR RESIDUE MG Q1552
18BC9SOFTWAREARG Q:100 , ASN Q:104 , PHE Q:295 , ALA Q:296 , THR Q:297 , GLU Q:445 , HOH Q:2007 , HOH Q:2095 , HOH Q:2120BINDING SITE FOR RESIDUE GOL Q1553
19CC1SOFTWARELYS Q:189 , ARG Q:529BINDING SITE FOR RESIDUE CL Q1554
20CC2SOFTWAREILE R:24 , GLU R:25 , HIS R:118 , ARG R:476 , ASP R:541 , HOH R:2005 , HOH R:2006 , HOH R:2007 , HOH R:2008 , HOH R:2093BINDING SITE FOR RESIDUE GLY R 601
21CC3SOFTWARECSX R:75 , VAL R:78 , HIS R:79 , ALA R:474 , PRO R:475 , ARG R:476 , LEU R:479 , VAL R:497 , PRO R:498 , SER R:499 , CYS R:546 , NI R:1551 , HOH R:2001BINDING SITE FOR RESIDUE FCO R1550
22CC4SOFTWARECYS R:72 , CSX R:75 , CSS R:543 , CYS R:546 , FCO R:1550 , HOH R:2001BINDING SITE FOR RESIDUE NI R1551
23CC5SOFTWAREGLU R:53 , LEU R:495 , HIS R:549 , HOH R:2002 , HOH R:2003 , HOH R:2004BINDING SITE FOR RESIDUE MG R1552
24CC6SOFTWAREARG R:100 , ASN R:104 , PHE R:295 , ALA R:296 , THR R:297 , GLU R:445 , GOL R:1555 , HOH R:2083 , HOH R:2104BINDING SITE FOR RESIDUE GOL R1553
25CC7SOFTWARESER R:313 , ASN R:326 , LYS R:395 , GOL R:1556 , HOH R:2122 , HOH R:2284 , HOH R:2294 , HOH R:2478BINDING SITE FOR RESIDUE GOL R1554
26CC8SOFTWAREGLN R:310 , TRP R:442 , GLU R:445 , GOL R:1553 , HOH R:2290 , HOH R:2342 , HOH R:2584BINDING SITE FOR RESIDUE GOL R1555
27CC9SOFTWAREGOL B:1269 , ASN R:454 , HOH R:2066 , HOH R:2114 , HOH R:2247BINDING SITE FOR RESIDUE GOL B1272
28DC1SOFTWARELYS B:106 , HOH B:2224 , GLU R:303 , LEU R:306 , ASN R:326 , VAL R:327 , GOL R:1554 , HOH R:2076 , HOH R:2385 , HOH R:2537BINDING SITE FOR RESIDUE GOL R1556
29DC2SOFTWAREPRO R:15 , VAL R:17 , GLU R:33 , TRP R:43 , LYS R:365 , HOH R:2308 , HOH R:2555BINDING SITE FOR RESIDUE GOL R1557

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Q:259 -Q:436
2R:259 -R:436

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Lys A:29 -Pro A:30
2Lys A:124 -Pro A:125
3Cys A:147 -Pro A:148
4Thr A:258 -Pro A:259
5Lys B:29 -Pro B:30
6Lys B:124 -Pro B:125
7Cys B:147 -Pro B:148
8Thr B:258 -Pro B:259
9Asp Q:19 -Pro Q:20
10Asn Q:226 -Pro Q:227
11Asp R:19 -Pro R:20
12Asn R:226 -Pro R:227

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UQL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UQL)

(-) Exons   (0, 0)

(no "Exon" information available for 4UQL)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:262
                                                                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee....hhhhhhhh.....hhhhhhhhh.eeee.......hhhhhhhhhhhhhh.....eeeee..ee.hhhhh..ee..eehhhhhhhhhhhh..eeeehhhhhhhhhhhh......eehhhhhhh...eee.....hhhhhhhhhhhhhhh..........hhhhhh..hhhhh.hhhhhhh........hhhhhh...hhhhh.hhhhh..hhhhhh....................hhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uql A   3 AKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG 264
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262  


Chain B from PDB  Type:PROTEIN  Length:264
                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeeeee....hhhhhhhh.....hhhhhhhhh.eeee.......hhhhhhhhhhhhhh.....eeeee..ee.hhhhh..ee..eehhhhhhhhhhhh.eeeeehhhhhhhhhhhh......eehhhhhhh...eee.....hhhhhhhhhhhhhhh..........hhhhhh..hhhhh.hhhhhhh........hhhhhh...hhhhh.hhhhh..hhhhhh....................hhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4uql B   2 TAKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQGG 301
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261  ||
                                                                                                                                                                                                                                                                                                264|
                                                                                                                                                                                                                                                                                                 301


Chain Q from PDB  Type:PROTEIN  Length:545
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee.........eeeeeeee..eeeeeeeee....hhhhhhh..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh..hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..hhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......ee..ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee..eee....hhhhhhhheee..eee...........hhh.eeee.............hhhhh...................eeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeeeeee..eeeeeeeeee..eeeeeeeehhhhhhhh........hhhhhhhh.........hhhhhhhhhhh..hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uql Q   6 PTPQSTFTGPIVVDPITRIEGHLRIMVEVENGKVKDAWSSSQLFRGLEIILKGRDPRDAQHFTQRACGVcTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHAHALDWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVDLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTKDPLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPEKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGALSHWIRIKGKKIDNFQLVVPSTWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEILRTVHAFDPcIACGVHG 601
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545   ||
                                                                                                75-CSX                                                                                                                                                                                                                                                                                                                                                                                                                                                                             543-CSS49|
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          601


Chain R from PDB  Type:PROTEIN  Length:546
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeee.........eeeeeeee..eeeeeeeee....hhhhhhh..hhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..hhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......ee..ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee..eee....hhhhhhhheee..eee...........hhh.eeee.............hhhhh...................eeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeeeeee..eeeeeeeeee..eeeeeeeehhhhhhhh........hhhhhhhh.........hhhhhhhhhhh..hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4uql R   5 KPTPQSTFTGPIVVDPITRIEGHLRIMVEVENGKVKDAWSSSQLFRGLEIILKGRDPRDAQHFTQRACGVcTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHAHALDWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVDLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTKDPLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPEKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGALSHWIRIKGKKIDNFQLVVPSTWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEILRTVHAFDPcIACGVHG 601
                                    14        24        34        44        54        64        74|       84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544    ||
                                                                                                 75-CSX                                                                                                                                                                                                                                                                                                                                                                                                                                                                             543-CSS49|
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           601
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UQL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UQL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UQL)

(-) Gene Ontology  (11, 31)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        E1K247_DESFR | E1K247: 4ue2 4ue6 4upv 4urh
        E1K248_DESFR | E1K248: 4ue2 4ue6 4upv 4urh
        PHNL_DESFR | P18188: 1frf 1yqw 1yrq 3cur 3cus 3h3x 4ucq 4ucw 4ucx 4ue2 4ue6 4uew 4upe 4upv 4uqp 4urh
        PHNS_DESFR | P18187: 1frf 1yqw 1yrq 3cur 3cus 3h3x 4ucq 4ucw 4ucx 4ue2 4ue6 4uew 4upe 4upv 4uqp 4urh
UniProtKB/TrEMBL
        E1K247_DESFR | E1K247: 4ucq 4ucw 4ud2 4ud6 4ueq 4uew
        E1K248_DESFR | E1K248: 4ucq 4ucw 4ud2 4ud6 4ueq 4uew

(-) Related Entries Specified in the PDB File

4upe STRUCTURE OF THE UNREADY NI-A STATE OF THE S499C MUTANT OF D. FRUCTOSOVORANS NIFE-HYDROGENASE
4upv LOW X-RAY DOSE STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
4uqp HIGH-RESOLUTION STRUCTURE OF THE D. FRUCTOSOVORANS NIFE -HYDROGENASE L122A MUTANT AFTER EXPOSURE TO AIR
4urh HIGH-RESOLUTION STRUCTURE OF PARTIALLY OXIDIZED D. FRUCTOSOVORANS NIFE-HYDROGENASE