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(-) Description

Title :  HIGH-RESOLUTION STRUCTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT AFTER EXPOSURE TO AIR
 
Authors :  A. Volbeda, L. Martin, E. Barbier, O. Gutierrez-Sanz, A. L. Delacey, P. P. Liebgott, S. Dementin, M. Rousset, J. C. Fontecilla-Camps
Date :  24 Jun 14  (Deposition) - 29 Oct 14  (Release) - 21 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.42
Chains :  Asym. Unit :  A,B,Q,R
Biol. Unit 1:  B,R  (1x)
Biol. Unit 2:  A,Q  (1x)
Keywords :  Oxidoreductase, Nife-Site, Ni-A State, Sulfenate, Ni-Sox State, Persulfide (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Volbeda, L. Martin, E. Barbier, O. Gutierrez-Sanz, A. L. De Lacey, P. Liebgott, S. Dementin, M. Rousset, J. C. Fontecilla-Camps
Crystallographic Studies Of [Nife]-Hydrogenase Mutants: Towards Consensus Structures For The Elusive Unready Oxidized States.
J. Biol. Inorg. Chem. V. 20 11 2015
PubMed-ID: 25315838  |  Reference-DOI: 10.1007/S00775-014-1203-9
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
    Chains: A, B
    EC Number: 1.12.2.1
    Engineered: YES
    Expression System: DESULFOVIBRIO FRUCTOSOVORANS
    Expression System Taxid: 878
    Fragment: UNP RESIDUES 50-314
    Organism Scientific: DESULFOVIBRIO FRUCTOSOVORANS
    Organism Taxid: 878
    Synonym: NIFE-HYDROGENASE SMALL SUBUNIT, NIFE HYDROGENLYASE SMALL CHAIN
 
Molecule 2 - PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT
    Chains: Q, R
    EC Number: 1.12.2.1
    Engineered: YES
    Expression System: DESULFOVIBRIO FRUCTOSOVORANS
    Expression System Taxid: 878
    Mutation: YES
    Organism Scientific: DESULFOVIBRIO FRUCTOSOVORANS
    Organism Taxid: 878
    Synonym: 1NIFE-HYDROGENASE LARGE SUBUNIT, NIFE HYDROGENLYASE LARGE CHAIN

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABQR
Biological Unit 1 (1x):  B R
Biological Unit 2 (1x): A Q 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (11, 28)

Asymmetric Unit (11, 28)
No.NameCountTypeFull Name
1CSS2Mod. Amino AcidS-MERCAPTOCYSTEINE
2CSX2Mod. Amino AcidS-OXY CYSTEINE
3F3S2Ligand/IonFE3-S4 CLUSTER
4FCO2Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
5GLY2Mod. Amino AcidGLYCINE
6GOL8Ligand/IonGLYCEROL
7H2S1Ligand/IonHYDROSULFURIC ACID
8MG2Ligand/IonMAGNESIUM ION
9NI2Ligand/IonNICKEL (II) ION
10SF44Ligand/IonIRON/SULFUR CLUSTER
11SOT1Ligand/IonMORPHOLINE-4-SULFONIC ACID
Biological Unit 1 (9, 14)
No.NameCountTypeFull Name
1CSS1Mod. Amino AcidS-MERCAPTOCYSTEINE
2CSX1Mod. Amino AcidS-OXY CYSTEINE
3F3S1Ligand/IonFE3-S4 CLUSTER
4FCO1Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
5GLY1Mod. Amino AcidGLYCINE
6GOL5Ligand/IonGLYCEROL
7H2S1Ligand/IonHYDROSULFURIC ACID
8MG-1Ligand/IonMAGNESIUM ION
9NI-1Ligand/IonNICKEL (II) ION
10SF42Ligand/IonIRON/SULFUR CLUSTER
11SOT1Ligand/IonMORPHOLINE-4-SULFONIC ACID
Biological Unit 2 (7, 10)
No.NameCountTypeFull Name
1CSS1Mod. Amino AcidS-MERCAPTOCYSTEINE
2CSX1Mod. Amino AcidS-OXY CYSTEINE
3F3S1Ligand/IonFE3-S4 CLUSTER
4FCO1Ligand/IonCARBONMONOXIDE-(DICYANO) IRON
5GLY1Mod. Amino AcidGLYCINE
6GOL3Ligand/IonGLYCEROL
7H2S-1Ligand/IonHYDROSULFURIC ACID
8MG-1Ligand/IonMAGNESIUM ION
9NI-1Ligand/IonNICKEL (II) ION
10SF42Ligand/IonIRON/SULFUR CLUSTER
11SOT-1Ligand/IonMORPHOLINE-4-SULFONIC ACID

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:184 , CYS A:187 , ARG A:189 , LEU A:190 , CYS A:212 , LEU A:213 , CYS A:218BINDING SITE FOR RESIDUE SF4 A1265
02AC2SOFTWARETHR A:223 , ASN A:225 , CYS A:227 , PHE A:232 , TRP A:237 , CYS A:245 , LEU A:246 , CYS A:248 , LYS Q:225 , GLN Q:230BINDING SITE FOR RESIDUE F3S A1266
03AC3SOFTWAREGLU A:16 , CYS A:17 , CYS A:20 , THR A:113 , CYS A:114 , GLY A:146 , CYS A:147 , PRO A:148 , ARG Q:70BINDING SITE FOR RESIDUE SF4 A1267
04AC4SOFTWAREASP A:82 , GLN A:85 , HOH A:2459 , HOH A:2468 , HOH A:2477 , GLN B:129 , LYS B:131 , THR Q:360 , HOH Q:2794BINDING SITE FOR RESIDUE GOL A1268
05AC5SOFTWAREHIS B:184 , CYS B:187 , ARG B:189 , LEU B:190 , CYS B:212 , LEU B:213 , CYS B:218 , PRO B:221BINDING SITE FOR RESIDUE SF4 B1265
06AC6SOFTWARETHR B:223 , ASN B:225 , CYS B:227 , PHE B:232 , TRP B:237 , CYS B:245 , LEU B:246 , CYS B:248 , LYS R:225 , GLN R:230BINDING SITE FOR RESIDUE F3S B1266
07AC7SOFTWAREGLU B:16 , CYS B:17 , CYS B:20 , THR B:113 , CYS B:114 , GLY B:146 , CYS B:147 , PRO B:148 , ARG R:70BINDING SITE FOR RESIDUE SF4 B1267
08AC8SOFTWARETYR B:214 , PRO B:221BINDING SITE FOR RESIDUE SOT B1268
09AC9SOFTWAREHIS B:5 , ASP B:68 , HOH B:2483 , HOH B:2491 , HOH B:2546 , GLN R:175BINDING SITE FOR RESIDUE H2S B1269
10BC1SOFTWAREARG Q:100 , ASN Q:104 , PHE Q:295 , ALA Q:296 , THR Q:297 , GLU Q:445 , GOL Q:1551 , HOH Q:2795 , HOH Q:2820BINDING SITE FOR RESIDUE GOL Q1550
11BC2SOFTWAREGLN Q:310 , TRP Q:442 , GLU Q:445 , GOL Q:1550 , HOH Q:2903 , HOH Q:2982BINDING SITE FOR RESIDUE GOL Q1551
12BC3SOFTWARECSX Q:75 , VAL Q:78 , HIS Q:79 , ALA Q:474 , PRO Q:475 , ARG Q:476 , LEU Q:479 , VAL Q:497 , PRO Q:498 , SER Q:499 , CYS Q:546 , NI Q:1553 , HOH Q:2701BINDING SITE FOR RESIDUE FCO Q1552
13BC4SOFTWARECYS Q:72 , CSX Q:75 , CSS Q:543 , CYS Q:546 , FCO Q:1552 , HOH Q:2701BINDING SITE FOR RESIDUE NI Q1553
14BC5SOFTWAREGLU Q:53 , LEU Q:495 , HIS Q:549 , HOH Q:2702 , HOH Q:2703 , HOH Q:2704BINDING SITE FOR RESIDUE MG Q1554
15BC6SOFTWAREILE Q:24 , GLU Q:25 , HIS Q:118 , ARG Q:476 , ASP Q:541 , HOH Q:2705 , HOH Q:2706 , HOH Q:2771 , HOH Q:2778BINDING SITE FOR RESIDUE GLY Q1555
16BC7SOFTWAREARG R:100 , ASN R:104 , PHE R:295 , ALA R:296 , THR R:297 , GLU R:445 , GOL R:1552 , HOH R:2782 , HOH R:2803BINDING SITE FOR RESIDUE GOL R1550
17BC8SOFTWARESER R:313 , ASN R:326 , LYS R:395 , HOH R:2821 , HOH R:2984 , HOH R:2994 , HOH R:3008BINDING SITE FOR RESIDUE GOL R1551
18BC9SOFTWAREGLN R:310 , TRP R:442 , GLU R:445 , GOL R:1550 , HOH R:2990 , HOH R:3042 , HOH R:3260BINDING SITE FOR RESIDUE GOL R1552
19CC1SOFTWAREASN R:454 , HOH R:2765 , HOH R:2813 , HOH R:2946 , HOH R:3011BINDING SITE FOR RESIDUE GOL R1553
20CC2SOFTWAREPRO R:15 , VAL R:17 , GLU R:33 , TRP R:43 , LYS R:365 , HOH R:3246BINDING SITE FOR RESIDUE GOL R1554
21CC3SOFTWARECSX R:75 , VAL R:78 , HIS R:79 , ALA R:474 , PRO R:475 , ARG R:476 , LEU R:479 , VAL R:497 , PRO R:498 , SER R:499 , CYS R:546 , NI R:1556 , HOH R:2701BINDING SITE FOR RESIDUE FCO R1555
22CC4SOFTWARECYS R:72 , CSX R:75 , CSS R:543 , CYS R:546 , FCO R:1555 , HOH R:2701BINDING SITE FOR RESIDUE NI R1556
23CC5SOFTWAREGLU R:53 , LEU R:495 , HIS R:549 , HOH R:2702 , HOH R:2703 , HOH R:2704BINDING SITE FOR RESIDUE MG R1557
24CC6SOFTWAREILE R:24 , GLU R:25 , HIS R:118 , ARG R:476 , ASP R:541 , HOH R:2705 , HOH R:2706 , HOH R:2707 , HOH R:2708 , HOH R:2792BINDING SITE FOR RESIDUE GLY R1558

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Q:259 -Q:436
2R:259 -R:436

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Lys A:29 -Pro A:30
2Lys A:124 -Pro A:125
3Cys A:147 -Pro A:148
4Thr A:258 -Pro A:259
5Lys B:29 -Pro B:30
6Lys B:124 -Pro B:125
7Cys B:147 -Pro B:148
8Thr B:258 -Pro B:259
9Asp Q:19 -Pro Q:20
10Asn Q:226 -Pro Q:227
11Asp R:19 -Pro R:20
12Asn R:226 -Pro R:227

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UQP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UQP)

(-) Exons   (0, 0)

(no "Exon" information available for 4UQP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:262
                                                                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee....hhhhhhhh.....hhhhhhhhh.eeee.......hhhhhhhhhhhhhh....eeeeee..ee.hhhhh..ee..eehhhhhhhhhhhh..eeeehhhhhhhhhhhh......eehhhhhhh...eee.....hhhhhhhhhhhhhhh..........hhhhhh..hhhhh.hhhhhhh........hhhhhh...hhhhh.hhhhh..hhhhhh....................hhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uqp A   3 AKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG 264
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262  


Chain B from PDB  Type:PROTEIN  Length:263
                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee....hhhhhhhh.....hhhhhhhhh.eeee.......hhhhhhhhhhhhhh....eeeeee..ee.hhhhh..ee..eehhhhhhhhhhhh..eeeehhhhhhhhhhhh......eehhhhhhh...eee.....hhhhhhhhhhhhhhh..........hhhhhh..hhhhh.hhhhhhh........hhhhhh...hhhhh.hhhhh..hhhhhh....................hhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uqp B   2 TAKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG 264
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   


Chain Q from PDB  Type:PROTEIN  Length:544
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee.........eeeeeeee..eeeeeeeee....hhhhhhh..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh..hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..hhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......ee..ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee..eee....hhhhhhhheee..eee...........hhh.eeee.............hhhhh...................eeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeeeeee..eeeeeeeeee..eeeeeeeehhhhhhhh........hhhhhhhh.........hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uqp Q   6 PTPQSTFTGPIVVDPITRIEGHLRIMVEVENGKVKDAWSSSQLFRGLEIILKGRDPRDAQHFTQRACGVcTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHAHALDWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVDLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTKDPLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPEKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGALSHWIRIKGKKIDNFQLVVPSTWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEILRTVHAFDPcIACGVH 549
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545    
                                                                                                75-CSX                                                                                                                                                                                                                                                                                                                                                                                                                                                                             543-CSS  


Chain R from PDB  Type:PROTEIN  Length:545
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee.........eeeeeeee..eeeeeeeee....hhhhhhh..hhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..hhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......ee..ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee..eee....hhhhhhhheee..eee...........hhh.eeee.............hhhhh...................eeee.......hhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeeeeee..eeeeeeeeee..eeeeeeeehhhhhhhh........hhhhhhhh.........hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uqp R   5 KPTPQSTFTGPIVVDPITRIEGHLRIMVEVENGKVKDAWSSSQLFRGLEIILKGRDPRDAQHFTQRACGVcTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHAHALDWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFLGGHKAYYLPPEVDLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTKDPLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPEKHLATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDKDHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRTAARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGALSHWIRIKGKKIDNFQLVVPSTWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEILRTVHAFDPcIACGVH 549
                                    14        24        34        44        54        64        74|       84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544     
                                                                                                 75-CSX                                                                                                                                                                                                                                                                                                                                                                                                                                                                             543-CSS
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UQP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UQP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UQP)

(-) Gene Ontology  (11, 17)

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  4uqp
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  1.12.2.1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PHNL_DESFR | P18188: 1frf 1yqw 1yrq 3cur 3cus 3h3x 4ucq 4ucw 4ucx 4ue2 4ue6 4uew 4upe 4upv 4uql 4urh
        PHNS_DESFR | P18187: 1frf 1yqw 1yrq 3cur 3cus 3h3x 4ucq 4ucw 4ucx 4ue2 4ue6 4uew 4upe 4upv 4uql 4urh

(-) Related Entries Specified in the PDB File

4upe STRUCTURE OF THE UNREADY NI-A STATE OF THE S499C MUTANT OF D. FRUCTOSOVORANS NIFE-HYDROGENASE
4upv LOW X-RAY DOSE STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
4uql HIGH-RESOLUTION STRUCTURE OF A NI-A NI-SOX MIXTURE OF THE D. FRUCTOSOVORANS NIFE-HYDROGENASE L122A MUTANT
4urh HIGH-RESOLUTION STRUCTURE OF PARTIALLY OXIDIZED D. FRUCTOSOVORANS NIFE-HYDROGENASE