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(-) Description

Title :  MST3 IN COMPLEX WITH DASATINIB
 
Authors :  S. H. Olesen, C. Watts, J. -Y. Zhu, E. Schonbrunn
Date :  16 Jun 14  (Deposition) - 01 Jul 15  (Release) - 13 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.88
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Kinase, Mst3, Stk24, Sterile 20-Like Kinase, Atp-Binding, Nucleotide-Binding, Phosphoprotein, Serine/Threonine-Transferase, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. H. Olesen, J. Y. Zhu, M. P. Martin, E. Schonbrunn
Discovery Of Diverse Small-Molecule Inhibitors Of Mammalian Sterile20-Like Kinase 3 (Mst3).
Chemmedchem V. 11 1137 2016
PubMed-ID: 27135311  |  Reference-DOI: 10.1002/CMDC.201600115

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE 24
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21 (DE3) RIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 1-303
    Gene: MST3, STK24, STK3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: MAMMALIAN STE20-LIKE PROTEIN KINASE 3, MST-3, STE20-LIKE KINASE MST3, SERINE/THREONINE-PROTEIN KINASE 24 36 KDA SUBUNIT, MAMMALIAN STE20-LIKE PROTEIN KINASE 3 N-TERMINAL, MST3/N, SERINE/THREONINE-PROTEIN KINASE 24 12 KDA SUBUNIT, MAMMALIAN STE20- LIKE PROTEIN KINASE 3 C-TERMINAL, MST3/C

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 4)

Asymmetric/Biological Unit (4, 4)
No.NameCountTypeFull Name
11N11Ligand/IonN-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE
2CL1Ligand/IonCHLORIDE ION
3EDO1Ligand/Ion1,2-ETHANEDIOL
4TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:30 , ALA A:51 , LYS A:53 , GLU A:70 , MET A:99 , GLU A:100 , TYR A:101 , LEU A:102 , GLY A:103 , HOH A:568 , HOH A:647BINDING SITE FOR RESIDUE 1N1 A 401
2AC2SOFTWARETHR A:238 , LYS A:248 , GLU A:249 , GLU A:252 , HOH A:509 , HOH A:601BINDING SITE FOR RESIDUE EDO A 402
3AC3SOFTWAREGLY A:103 , SER A:153 , GLU A:154BINDING SITE FOR RESIDUE CL A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QMS)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Lys A:32 -Gly A:33
2Ala A:60 -Glu A:61

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QMS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QMS)

(-) Exons   (0, 0)

(no "Exon" information available for 4QMS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee.hhh.eeeeeeee.....eeeeeee.....eeeeeeee.hhh..hhhhhhhhhhhhhhh.......eeeeeee..eeeeeee....eehhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee.............hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh.hhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qms A  15 NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNtFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ 298
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174   |   184       194       204       214       224       234       244       254       264       274       284       294    
                                                                                                                                                                                             178-TPO
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QMS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QMS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QMS)

(-) Gene Ontology  (29, 29)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STK24_HUMAN | Q9Y6E0: 3a7f 3a7g 3a7h 3a7i 3a7j 3ckw 3ckx 3zhp 4o27 4qml 4qmm 4qmn 4qmo 4qmp 4qmq 4qmt 4qmu 4qmv 4qmw 4qmx 4qmy 4qmz 4qna 4qo9 4u8z 4w8d 4w8e

(-) Related Entries Specified in the PDB File

4qml 4qmm 4qmn 4qmo 4qmp 4qmq 4qmr 4qms 4qmu 4qmv 4qmw 4qmx 4qmy 4qmz