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(-) Description

Title :  MST3 IN COMPLEX WITH PF-03814735, N-{2-[(1S,4R)-6-{[4-(CYCLOBUTYLAMINO)-5-(TRIFLUOROMETHYL)PYRIMIDIN-2-YL]AMINO}-1,2,3,4-TETRAHYDRO-1,4-EPIMINONAPHTHALEN-9-YL]-2-OXOETHYL}ACETAMIDE
 
Authors :  S. H. Olesen, C. Watts, J. -Y. Zhu, E. Schonbrunn
Date :  16 Jun 14  (Deposition) - 01 Jul 15  (Release) - 13 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Kinase, Mst3, Stk24, Sterile 20-Like Kinase, Atp-Binding, Nucleotide-Binding, Phosphoprotein, Serine/Threonine-Transferase, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. H. Olesen, J. Y. Zhu, M. P. Martin, E. Schonbrunn
Discovery Of Diverse Small-Molecule Inhibitors Of Mammalian Sterile20-Like Kinase 3 (Mst3).
Chemmedchem V. 11 1137 2016
PubMed-ID: 27135311  |  Reference-DOI: 10.1002/CMDC.201600115

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE 24
    ChainsA
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A
    Expression System StrainBL21 (DE3) RIL
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentRESIDUES 1-303
    GeneSTK24, MST3, STK3
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymSTE20-LIKE KINASE MST3, MST-3, MAMMALIAN STE20-LIKE PROTEIN KINASE 3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
134W1Ligand/IonN-{2-[(1S,4R)-6-{[4-(CYCLOBUTYLAMINO)-5-(TRIFLUOROMETHYL)PYRIMIDIN-2-YL]AMINO}-1,2,3,4-TETRAHYDRO-1,4-EPIMINONAPHTHALEN-9-YL]-2-OXOETHYL}ACETAMIDE
2EDO2Ligand/Ion1,2-ETHANEDIOL
3TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:28 , ILE A:30 , VAL A:38 , ALA A:51 , MET A:99 , GLU A:100 , LEU A:102 , GLY A:105 , LEU A:151 , TYR A:291 , HOH A:589BINDING SITE FOR RESIDUE 34W A 401
2AC2SOFTWARELYS A:199 , PRO A:259 , SER A:260 , HOH A:580BINDING SITE FOR RESIDUE EDO A 402
3AC3SOFTWAREPRO A:115 , HIS A:155 , ALA A:213 , ARG A:214 , TYR A:243BINDING SITE FOR RESIDUE EDO A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QMV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QMV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:289
                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhheeeeeeeee....eeeeeee.....eeeeeeee......hhhhhhhhhhhhhh........eeeeeee..eeeeeee....eehhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee.............hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh..........hhhhhhhhh.........hhhhhhhhhhhh..hhhhh.hhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qmv A  10 LPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNtFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ 298
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289         
                                                                                                                                                                                                  178-TPO                                                                                                                    

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QMV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QMV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QMV)

(-) Gene Ontology  (29, 29)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STK24_HUMAN | Q9Y6E03a7f 3a7g 3a7h 3a7i 3a7j 3ckw 3ckx 3zhp 4o27 4qml 4qmm 4qmn 4qmo 4qmp 4qmq 4qms 4qmt 4qmu 4qmw 4qmx 4qmy 4qmz 4qna 4qo9 4u8z 4w8d 4w8e

(-) Related Entries Specified in the PDB File

4qml 4qmm 4qmn 4qmo 4qmp 4qmq 4qms 4qmt 4qmw 4qmx 4qmy 4qmz 4qo9