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(-) Description

Title :  ANTHRANILATE PHOSPHORIBOSYL TRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH 3-FLUOROANTHRANILATE, PRPP AND MAGNESIUM
 
Authors :  A. Castell, T. V. M. Cookson, F. L. Short, J. S. Lott
Date :  02 Feb 14  (Deposition) - 23 Apr 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.99
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Anthranilic Acids, Magnesium, Tryptophan, Inhibitor, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. V. Cookson, A. Castell, E. M. Bulloch, G. L. Evans, F. L. Short, E. N. Baker, J. S. Lott, E. J. Parker
Alternative Substrates Reveal Catalytic Cycle And Key Binding Events In The Reaction Catalysed By Anthranilate Phosphoribosyltransferase From Mycobacterium Tuberculosis.
Biochem. J. V. 461 87 2014
PubMed-ID: 24712732  |  Reference-DOI: 10.1042/BJ20140209

(-) Compounds

Molecule 1 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
    Chains: A, B
    EC Number: 2.4.2.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET23A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MT2248,MTCY190.03C,RV2192C,TRPD
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 1773

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 10)

Asymmetric/Biological Unit (5, 10)
No.NameCountTypeFull Name
13F02Ligand/Ion2-AZANYL-3-FLUORANYL-BENZOIC ACID
2GOL1Ligand/IonGLYCEROL
3IMD1Ligand/IonIMIDAZOLE
4MG4Ligand/IonMAGNESIUM ION
5PRP2Ligand/IonALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:119 , GLU A:252 , MG A:402 , PRP A:403 , HOH A:672 , HOH A:715binding site for residue MG A 401
02AC2SOFTWAREASP A:111 , ASP A:251 , GLU A:252 , MG A:401 , HOH A:672 , HOH A:730 , HOH A:731 , HOH A:732binding site for residue MG A 402
03AC3SOFTWAREVAL A:106 , GLY A:107 , GLY A:109 , GLY A:110 , ASN A:117 , SER A:119 , THR A:120 , LYS A:135 , ASN A:138 , ALA A:140 , ALA A:141 , SER A:142 , SER A:143 , GLY A:146 , GLY A:147 , GLU A:252 , MG A:401 , HOH A:596 , HOH A:641 , HOH A:670 , HOH A:672 , HOH A:715 , HOH A:726 , HOH A:732binding site for residue PRP A 403
04AC4SOFTWAREASN A:138 , ALA A:179 , PRO A:180 , HIS A:183 , TYR A:186 , ARG A:187 , ARG A:194 , HOH A:684binding site for residue 3F0 A 404
05AC5SOFTWAREPHE A:274 , ASP A:275 , GLY A:278 , TRP A:336 , HOH A:521binding site for residue GOL A 405
06AC6SOFTWARESER B:119 , GLU B:252 , MG B:402 , PRP B:403 , HOH B:595 , HOH B:602binding site for residue MG B 401
07AC7SOFTWAREASP B:111 , ASP B:251 , GLU B:252 , MG B:401 , HOH B:595 , HOH B:698 , HOH B:699 , HOH B:700binding site for residue MG B 402
08AC8SOFTWAREVAL B:106 , GLY B:107 , GLY B:109 , GLY B:110 , ASN B:117 , SER B:119 , THR B:120 , LYS B:135 , ASN B:138 , ALA B:140 , ALA B:141 , GLY B:146 , GLY B:147 , GLU B:252 , MG B:401 , HOH B:595 , HOH B:659 , HOH B:677 , HOH B:698binding site for residue PRP B 403
09AC9SOFTWAREASN B:138 , ALA B:179 , HIS B:183 , TYR B:186 , ALA B:190 , ARG B:194 , HOH B:605 , HOH B:706binding site for residue 3F0 B 404
10AD1SOFTWAREALA B:236 , LEU B:305 , GLY B:306 , ILE B:351 , GLY B:354 , GLU B:357binding site for residue IMD B 405

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OWM)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OWM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OWM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OWM)

(-) Exons   (0, 0)

(no "Exon" information available for 4OWM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:346
                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.............eeeee.........hhhhhhhhhhhhh...eeeee........hhhhhhhhhh.....hhhhhhhhhhhhheeeeehhhhh..hhhhhhhhhhhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhhh...eeeeeee............eeeeeee..eeeeeeehhhhhh....hhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4owm A  25 PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI 370
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364      


Chain B from PDB  Type:PROTEIN  Length:347
                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh............eeeee.........hhhhhhhhhhhhh...eeeee......hhhhhhhhh......hhhhhhhhhhhhheeeeehhhhh..hhhhhhhhhhhh..hhhhhhhhhh......eeeee..hhhhhhhhhhhhhhh..eeeeeee............eeeeeee..eeeeeeehhhhhh....hhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4owm B  24 VPSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAALSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQILE 372
                                    33        43        53        63        73        83        93       103       113       123       133       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       
                                                                                                                                               141|                                                                                                                                                                                                                                    
                                                                                                                                                144
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OWM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OWM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OWM)

(-) Gene Ontology  (14, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TRPD_MYCTO | P9WFX4: 1zvw 2bpq 3qqs 3qr9 3qs8 3qsa 3r6c 3r88 3twp 3uu1 4giu 4gkm 4ij1 4m0r 4n5v 4n8q 4n93 4own 4owo 4owq 4ows 4owu 4owv
        TRPD_MYCTU | P9WFX5: 1zvw 2bpq 3qqs 3qr9 3qs8 3qsa 3r6c 3r88 3twp 3uu1 4giu 4gkm 4ij1 4m0r 4n5v 4n8q 4n93 4own 4owo 4owq 4ows 4owu 4owv 4x58 4x59 4x5a 4x5b 4x5c 4x5d 4x5e 5bne 5byt 5c1r 5c2l 5c7s

(-) Related Entries Specified in the PDB File

4own 4owo 4owq 4ows 4owu 4owv