4AQV - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   MODEL OF HUMAN KINESIN-5 MOTOR DOMAIN (3HQD) AND MAMMALIAN TUBULIN HETERODIMER (1JFF) DOCKED INTO THE 9.7-ANGSTROM CRYO-EM MAP OF MICROTUBULE-BOUND KINESIN-5 MOTOR DOMAIN IN THE AMPPPNP STATE.

Authors :   A. Goulet, W. M. Behnke-Parks, C. V. Sindelar, S. S. Rosenfeld, C. A. Moo

Date :   19 Apr 12 (Deposition) - 21 Nov 12 (Release) - 16 Jan 13 (Revision)

Method :   ELECTRON MICROSCOPY

Resolution :   9.70

Chains :   Asym./Biol. Unit : A,B,C

Keywords :   Motor Protein, Microtubule, Mitosis, Cancer (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Goulet, W. M. Behnke-Parks, C. V. Sindelar, J. Major, S. S. Rosenfeld, C. Moores
The Structural Basis Of Force Generation By The Mitotic Motor Kinesin-5.
J. Biol. Chem. V. 287 44654 2012
PubMed-ID: 23135273 | Reference-DOI: 10.1074/JBC.M112.404228

Molecule 1 - TUBULIN ALPHA-1D CHAIN
	Chains	:	A
	Organ	:	BRAIN
	Organism Common	:	CATTLE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	ALPHA-TUBULIN

Molecule 2 - TUBULIN BETA-2B CHAIN
	Chains	:	B
	Organ	:	BRAIN
	Organism Common	:	CATTLE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	BETA-TUBULIN

Molecule 3 - KINESIN-LIKE PROTEIN KIF11
	Chains	:	C
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector	:	PET21A
	Expression System Vector Type	:	PLASMID
	Fragment	:	MOTOR DOMAIN, RESIDUES 1-367
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	KINESIN-5, KINESIN-LIKE PROTEIN 1, KINESIN-LIKE SPINDLE PRO KINESIN-RELATED MOTOR PROTEIN EG5, THYROID RECEPTOR-INTERACTING PROTEIN 5, TR-INTERACTING PROTEIN 5, TRIP-5

		1	2	3
Asymmetric/Biological Unit	:	A	B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 6)

No.	Name	Count	Type	Full Name
1	ANP	1	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2	GDP	1	Ligand/Ion	GUANOSINE-5'-DIPHOSPHATE
3	GTP	1	Ligand/Ion	GUANOSINE-5'-TRIPHOSPHATE
4	MG	2	Ligand/Ion	MAGNESIUM ION
5	TA1	1	Ligand/Ion	TAXOL

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	THR C:107 , GLY C:108 , GLY C:110 , THR C:112 , SER C:233 , ALA C:267 , GLY C:268 , MG C:501	BINDING SITE FOR RESIDUE ANP C 500
2	AC2	SOFTWARE	ANP C:500	BINDING SITE FOR RESIDUE MG C 501
3	AC3	SOFTWARE	GTP A:501	BINDING SITE FOR RESIDUE MG A 500
4	AC4	SOFTWARE	GLY A:10 , GLN A:11 , ALA A:12 , ALA A:99 , ASN A:101 , GLY A:143 , GLY A:144 , THR A:145 , MG A:500	BINDING SITE FOR RESIDUE GTP A 501
5	AC5	SOFTWARE	GLY B:10 , CYS B:12 , THR B:145 , GLY B:146	BINDING SITE FOR RESIDUE GDP B 600
6	AC6	SOFTWARE	VAL B:23 , LEU B:275 , ARG B:278 , PRO B:360 , ARG B:369	BINDING SITE FOR RESIDUE TA1 B 601

(no "SS Bond" information available for 4AQV)

(no "Cis Peptide Bond" information available for 4AQV)

Asymmetric/Biological Unit (3, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_067829	F	144	L	KIF11_HUMAN	Disease (MCLMR)	---	C	F	144	L
2	UniProt	VAR_067830	R	234	C	KIF11_HUMAN	Disease (MCLMR)	---	C	R	234	C
3	UniProt	VAR_067831	S	235	C	KIF11_HUMAN	Disease (MCLMR)	387906643	C	S	235	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric/Biological Unit (3, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	KINESIN_MOTOR_2	PS50067	Kinesin motor domain profile.	KIF11_HUMAN	18-359	1	C:18-359
2	TUBULIN	PS00227	Tubulin subunits alpha, beta, and gamma signature.	TBB2B_BOVIN	140-146	1	B:142-148
2	TUBULIN	PS00227	Tubulin subunits alpha, beta, and gamma signature.	TBA1D_BOVIN	142-148	1	A:142-148
3	KINESIN_MOTOR_1	PS00411	Kinesin motor domain signature.	KIF11_HUMAN	259-270	1	C:259-270

Asymmetric/Biological Unit (13, 13)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000005346	1	ENSBTAE00000067590	chr23:51448815-51448966	152	TBB2B_BOVIN	1-19	19	1	B:2-19	18
1.2	ENSBTAT00000005346	2	ENSBTAE00000380542	chr23:51449714-51449822	109	TBB2B_BOVIN	20-56	37	1	B:20-58 (gaps)	39
1.3	ENSBTAT00000005346	3	ENSBTAE00000419208	chr23:51450093-51450203	111	TBB2B_BOVIN	56-93	38	1	B:58-95	38
1.4	ENSBTAT00000005346	4	ENSBTAE00000067601	chr23:51450543-51451603	1061	TBB2B_BOVIN	93-445	353	1	B:95-437 (gaps)	343

2.1	ENST00000260731	1	ENSE00000986575	chr10:94353043-94353209	167	KIF11_HUMAN	1-26	26	1	C:6-26	21
2.2	ENST00000260731	2	ENSE00001007288	chr10:94366022-94366154	133	KIF11_HUMAN	26-70	45	1	C:26-70	45
2.3	ENST00000260731	3	ENSE00001007283	chr10:94366376-94366473	98	KIF11_HUMAN	71-103	33	1	C:71-103	33
2.4	ENST00000260731	4	ENSE00001007277	chr10:94366916-94366994	79	KIF11_HUMAN	103-129	27	1	C:103-129	27
2.5	ENST00000260731	5	ENSE00001007278	chr10:94368777-94368962	186	KIF11_HUMAN	130-191	62	1	C:130-191	62
2.6	ENST00000260731	6	ENSE00001007286	chr10:94369142-94369266	125	KIF11_HUMAN	192-233	42	1	C:192-233	42
2.7	ENST00000260731	7	ENSE00001007276	chr10:94372797-94372887	91	KIF11_HUMAN	233-263	31	1	C:233-263	31
2.8	ENST00000260731	8	ENSE00001007273	chr10:94373134-94373376	243	KIF11_HUMAN	264-344	81	1	C:264-344	81
2.9	ENST00000260731	9	ENSE00001007274	chr10:94376494-94376589	96	KIF11_HUMAN	345-376	32	1	C:345-366	22
2.10	ENST00000260731	10	ENSE00001007282	chr10:94381142-94381230	89	KIF11_HUMAN	377-406	30	0	-	-
2.11	ENST00000260731	11	ENSE00001007275	chr10:94388565-94388652	88	KIF11_HUMAN	406-435	30	0	-	-
2.12	ENST00000260731	12	ENSE00001007285	chr10:94389933-94390121	189	KIF11_HUMAN	436-498	63	0	-	-
2.13	ENST00000260731	13	ENSE00001007284	chr10:94392243-94392450	208	KIF11_HUMAN	499-568	70	0	-	-
2.14	ENST00000260731	14	ENSE00001007281	chr10:94393380-94393552	173	KIF11_HUMAN	568-625	58	0	-	-
2.15	ENST00000260731	15	ENSE00001007287	chr10:94396941-94397066	126	KIF11_HUMAN	626-667	42	0	-	-
2.16	ENST00000260731	16	ENSE00001007280	chr10:94397144-94397302	159	KIF11_HUMAN	668-720	53	0	-	-
2.17	ENST00000260731	17	ENSE00001007279	chr10:94399551-94399657	107	KIF11_HUMAN	721-756	36	0	-	-
2.18	ENST00000260731	18	ENSE00000986592	chr10:94405120-94405399	280	KIF11_HUMAN	756-849	94	0	-	-
2.19	ENST00000260731	19	ENSE00000932880	chr10:94407969-94408191	223	KIF11_HUMAN	850-924	75	0	-	-
2.20	ENST00000260731	20	ENSE00000986593	chr10:94409592-94409743	152	KIF11_HUMAN	924-974	51	0	-	-
2.21	ENST00000260731	21	ENSE00000986594	chr10:94410158-94410274	117	KIF11_HUMAN	975-1013	39	0	-	-
2.22	ENST00000260731	22	ENSE00000986595	chr10:94413422-94415150	1729	KIF11_HUMAN	1014-1056	43	0	-	-

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:412
 aligned with TBA1D_BOVIN | Q2HJ86 from UniProtKB/Swiss-Prot  Length:452

    Alignment length:438
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        
          TBA1D_BOVIN     2 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGMDS 439
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .................................--------------------------........................................................................................................................................................................................................................................................................................................................................................................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------TUBULIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4aqv A   2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------------------------HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRGHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
                                    11        21        31  |      -         -        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        
                                                           34                         61

Chain B from PDB  Type:PROTEIN  Length:426
 aligned with TBB2B_BOVIN | Q6B856 from UniProtKB/Swiss-Prot  Length:445

    Alignment length:426
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421      
          TBB2B_BOVIN     2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 427
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......................................................................................................................................................................................................................................................................................................................................................................................................................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------TUBULIN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.1          Exon 1.2  PDB: B:20-58 (gaps)        ------------------------------------Exon 1.4  PDB: B:95-437 (gaps) UniProt: 93-445 [INCOMPLETE]                                                                                                                                                                                                                                                                                     Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------Exon 1.3  PDB: B:58-95 UniProt: 56-93 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 4aqv B   2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 437
                                    11        21        31        41  ||    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353      |371       381       391       401       411       421       431      
                                                                     44|                                                                                                                                                                                                                                                                                                                      360|                                                                    
                                                                      47                                                                                                                                                                                                                                                                                                                       369

Chain C from PDB  Type:PROTEIN  Length:361
 aligned with KIF11_HUMAN | P52732 from UniProtKB/Swiss-Prot  Length:1056

    Alignment length:361
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365 
          KIF11_HUMAN     6 NSSAKKKEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVN 366
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................................................................................................................................................................................................................................................................................................................................................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------L-----------------------------------------------------------------------------------------CC----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------------KINESIN_MOTOR_2  PDB: C:18-359 UniProt: 18-359                                                                                                                                                                                                                                                                                                        ------- PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KINESIN_MOTO------------------------------------------------------------------------------------------------ PROSITE (2)
           Transcript 2 (1) Exon 2.1  PDB: C:6-26--------------------------------------------Exon 2.3  PDB: C:71-103          --------------------------Exon 2.5  PDB: C:130-191 UniProt: 130-191                     Exon 2.6  PDB: C:192-233 UniProt: 192-233 ------------------------------Exon 2.8  PDB: C:264-344 UniProt: 264-344                                        Exon 2.9 [INCOMPLETE]  Transcript 2 (1)
           Transcript 2 (2) --------------------Exon 2.2  PDB: C:26-70 UniProt: 26-70        --------------------------------Exon 2.4  PDB: C:103-129   -------------------------------------------------------------------------------------------------------Exon 2.7  PDB: C:233-263       ------------------------------------------------------------------------------------------------------- Transcript 2 (2)
                 4aqv C   6 NSSAKKKEEKGKNIQVVVRVRPFNLAERKASAHSIVESDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVAPILDEVIMGYNATIFAYGQTGTGKTFTMEGERSPNEEYCWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVN 366
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4AQV)

(no "CATH Domain" information available for 4AQV)

(no "Pfam Domain" information available for 4AQV)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (TBA1D_BOVIN | Q2HJ86)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0003924	GTPase activity	Catalysis of the reaction: GTP + H2O = GDP + phosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005200	structural constituent of cytoskeleton	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
biological process
	GO:0007017	microtubule-based process	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005874	microtubule	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.

Chain B (TBB2B_BOVIN | Q6B856)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0003924	GTPase activity	Catalysis of the reaction: GTP + H2O = GDP + phosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005200	structural constituent of cytoskeleton	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
biological process
	GO:0007017	microtubule-based process	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
	GO:0001764	neuron migration	The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005874	microtubule	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain C (KIF11_HUMAN | P52732)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed	Catalysis of movement along a microtubule toward the plus end, coupled to the hydrolysis of ATP.
	GO:0008017	microtubule binding	Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
	GO:0003777	microtubule motor activity	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0032403	protein complex binding	Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0019901	protein kinase binding	Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
biological process
	GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II	The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.
	GO:0007049	cell cycle	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
	GO:0051301	cell division	The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
	GO:0007059	chromosome segregation	The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles.
	GO:0007018	microtubule-based movement	A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
	GO:0007100	mitotic centrosome separation	Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle.
	GO:0090307	mitotic spindle assembly	The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of mitosis.
	GO:0007052	mitotic spindle organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
	GO:0046602	regulation of mitotic centrosome separation	Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.
	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
	GO:0051225	spindle assembly	The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.
	GO:0007051	spindle organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005871	kinesin complex	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005874	microtubule	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
	GO:0005819	spindle	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
	GO:0005876	spindle microtubule	Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.
	GO:0000922	spindle pole	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.

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1ii6	CRYSTAL STRUCTURE OF THE MITOTIC KINESIN EG5 IN COMPLEXWITH MG-ADP.
1jff	REFINED STRUCTURE OF ALPHA-BETA TUBULIN FROM ZINC- INDUCEDSHEETS STABILIZED WITH TAXOL
1q0b	CRYSTAL STRUCTURE OF THE MOTOR PROTEIN KSP IN COMPLEX WITHADP AND MONASTROL
1sa0	TUBULIN-COLCHICINE: STATHMIN-LIKE DOMAIN COMPLEX
1sa1	TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX
1tvk	THE BINDING MODE OF EPOTHILONE A ON A,B-TUBULIN BY ELECTRONCRYSTALLOGRAPHY
1x88	HUMAN EG5 MOTOR DOMAIN BOUND TO MG-ADP AND MONASTROL
1yrs	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 1
1z2b	TUBULIN-COLCHICINE-VINBLASTINE: STATHMIN-LIKE DOMAIN COMPLEX
2fky	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 13
2fl2	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 19
2fl6	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 6
2g1q	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 9H
2gm1	CRYSTAL STRUCTURE OF THE MITOTIC KINESIN EG5 IN COMPLEXWITH MG-ADP AND N-(3-AMINOPROPYL)-N-((3- BENZYL-5-CHLORO-4-OXO-3,4-DIHYDROPYRROLO[2,1-F][ 1,2,4]TRIAZIN-2-YL)(CYCLOPROPYL)METHYL)-4- METHYLBENZAMIDE
2uyi	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH ADP AND THIOPHENE CONTAINING INHIBITOR 33
2uym	CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH ADP AND THIOPHENE CONTAINING INHIBITOR 37
2wbe	KINESIN-5-TUBULIN COMPLEX WITH AMPPNP
2wog	INTERMEDIATE AND FINAL STATES OF HUMAN KINESIN EG5 IN COMPLEX WITH S-TRITYL-L-CYSTEINE
2x2r	CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-2-AMINO-3-((4-CHLOROPHENYL)DIPHENYLMETHYLTHIO) PROPANOIC ACID
2x7c	CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (S)-ENASTRON
2x7d	CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (S)-DIMETHYLENASTRON
2x7e	CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-FLUORASTROL
2xae	CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-2-AMINO-3-((S)-2-METHYL-1,1-DIPHENYLBUTYLTHIO )PROPANOIC ACID
2xrp	HUMAN DOUBLECORTIN N-DC REPEAT (1MJD) AND MAMMALIAN TUBULIN (1JFF AND 3HKE) DOCKED INTO THE 8-ANGSTROM CRYO-EM MAP OF DOUBLECORTIN-STABILISED MICROTUBULES
4a1z	EG5-1
4a28	EG5-2
4a50	EG5-INHIBITOR COMPLEX
4a51	EG5-INHIBITOR COMPLEX
4a5y	EG5-INHIBITOR COMPLEX
4ap0	THE MITOTIC KINESIN EG5 IN COMPLEX WITH MG-ADP AND ISPINESIB
4aqw	MODEL OF HUMAN KINESIN-5 MOTOR DOMAIN (1II6, 3HQD) AND MAMMALIAN TUBULIN HETERODIMER (1JFF) DOCKED INTO THE 9.5-ANGSTROM CRYO-EM MAP OF MICROTUBULE-BOUND KINESIN-5 MOTOR DOMAIN IN THE RIGOR STATE.
4as7	EG5 COMPLEX 1
4atu	HUMAN DOUBLECORTIN N-DC REPEAT PLUS LINKER, AND TUBULIN (2XRP) DOCKED INTO AN 8A CRYO-EM MAP OF DOUBLECORTIN-STABILISED MICROTUBULES RECONSTRUCTED IN ABSENCE OF KINESIN
4atx	RIGOR KINESIN MOTOR DOMAIN WITH AN ORDERED NECK-LINKER , DOCKED ON TUBULIN DIMER, MODELLED INTO THE 8A CRYO -EM MAP OF DOUBLECORTIN-MICROTUBULES DECORATED WITH KINESIN
4b7b	EG5-3
4bbg	EG5-INHIBITOR COMPLEX RELATED ID: EMD-2077 RELATED DB: EMDB ELECTRON CRYO-MICROSCOPY OF MICROTUBULE-BOUND HUMAN KINESIN-5 MOTOR DOMAIN IN AMPPNP STATE.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 6)

Sites (6, 6)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (3, 3)

PROSITE Motifs (3, 4)

Exons (13, 13)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (34, 46)

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