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(-) Description

Title :  STRUCTURE OF THE ACTIN-BINDING DOMAIN OF HUMAN FILAMIN A (REDUCED)
 
Authors :  A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Date :  03 Jun 09  (Deposition) - 13 Oct 09  (Release) - 01 Dec 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Calponin Homology Domain, Actin Binding Domain, Acetylation, Actin-Binding, Alternative Splicing, Cytoplasm, Cytoskeleton, Disease Mutation, Phosphoprotein, Polymorphism, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Skeletal Dysplasias Due To Filamin A Mutations Result From A Gain-Of-Function Mechanism Distinct From Allelic Neurological Disorders
Hum. Mol. Genet. V. 18 4791 2009
PubMed-ID: 19773341  |  Reference-DOI: 10.1093/HMG/DDP442
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FILAMIN-A
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPPROEX HTB
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentACTIN-BINDING DOMAIN
    GeneFLNA
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymALPHA-FILAMIN, FILAMIN-1, ENDOTHELIAL ACTIN- BINDING PROTEIN, ACTIN-BINDING PROTEIN 280, ABP-280, NON- MUSCLE FILAMIN

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1PO44Ligand/IonPHOSPHATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1PO42Ligand/IonPHOSPHATE ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1PO42Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:220 , PRO A:221 , VAL A:222 , THR A:223BINDING SITE FOR RESIDUE PO4 A 270
2AC2SOFTWARESER A:61 , LYS A:62 , ARG A:63 , ARG A:76BINDING SITE FOR RESIDUE PO4 A 271
3AC3SOFTWARELYS B:220 , PRO B:221 , VAL B:222 , THR B:223BINDING SITE FOR RESIDUE PO4 B 270
4AC4SOFTWARESER B:194 , ARG B:196BINDING SITE FOR RESIDUE PO4 B 271

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HOR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3HOR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (15, 28)

Asymmetric Unit (15, 28)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_015699E82VFLNA_HUMANDisease (PVNH1)28935169A/BE82V
02UniProtVAR_031305M102VFLNA_HUMANDisease (PVNH1)  ---A/BM102V
03UniProtVAR_031306A128VFLNA_HUMANDisease (PVNH1)137853315A/BA128V
04UniProtVAR_031307S149FFLNA_HUMANDisease (PVNH1)  ---A/BS149F
05UniProtVAR_015713Q170PFLNA_HUMANDisease (OPD2)863223628AQ170P
06UniProtVAR_015714L172FFLNA_HUMANDisease (OPD1)  ---A/BL172F
07UniProtVAR_076500N187SFLNA_HUMANUnclassified (OPD2)  ---A/BN187S
08UniProtVAR_015715R196GFLNA_HUMANDisease (OPD2)  ---A/BR196G
09UniProtVAR_015716R196WFLNA_HUMANDisease (OPD1)137853317A/BR196W
10UniProtVAR_015717A200SFLNA_HUMANDisease (OPD2)  ---A/BA200S
11UniProtVAR_031308D203YFLNA_HUMANDisease (OPD1)137853314A/BD203Y
12UniProtVAR_015700P207LFLNA_HUMANDisease (OPD1)28935469A/BP207L
13UniProtVAR_058720C210FFLNA_HUMANDisease (OPD2)137853318A/BC210F
14UniProtVAR_015701E254KFLNA_HUMANDisease (OPD2)28935470A/BE254K
15UniProtVAR_076501A267TFLNA_HUMANUnclassified (OPD1)  ---BA267T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_015699E82VFLNA_HUMANDisease (PVNH1)28935169AE82V
02UniProtVAR_031305M102VFLNA_HUMANDisease (PVNH1)  ---AM102V
03UniProtVAR_031306A128VFLNA_HUMANDisease (PVNH1)137853315AA128V
04UniProtVAR_031307S149FFLNA_HUMANDisease (PVNH1)  ---AS149F
05UniProtVAR_015713Q170PFLNA_HUMANDisease (OPD2)863223628AQ170P
06UniProtVAR_015714L172FFLNA_HUMANDisease (OPD1)  ---AL172F
07UniProtVAR_076500N187SFLNA_HUMANUnclassified (OPD2)  ---AN187S
08UniProtVAR_015715R196GFLNA_HUMANDisease (OPD2)  ---AR196G
09UniProtVAR_015716R196WFLNA_HUMANDisease (OPD1)137853317AR196W
10UniProtVAR_015717A200SFLNA_HUMANDisease (OPD2)  ---AA200S
11UniProtVAR_031308D203YFLNA_HUMANDisease (OPD1)137853314AD203Y
12UniProtVAR_015700P207LFLNA_HUMANDisease (OPD1)28935469AP207L
13UniProtVAR_058720C210FFLNA_HUMANDisease (OPD2)137853318AC210F
14UniProtVAR_015701E254KFLNA_HUMANDisease (OPD2)28935470AE254K

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_015699E82VFLNA_HUMANDisease (PVNH1)28935169BE82V
02UniProtVAR_031305M102VFLNA_HUMANDisease (PVNH1)  ---BM102V
03UniProtVAR_031306A128VFLNA_HUMANDisease (PVNH1)137853315BA128V
04UniProtVAR_031307S149FFLNA_HUMANDisease (PVNH1)  ---BS149F
06UniProtVAR_015714L172FFLNA_HUMANDisease (OPD1)  ---BL172F
07UniProtVAR_076500N187SFLNA_HUMANUnclassified (OPD2)  ---BN187S
08UniProtVAR_015715R196GFLNA_HUMANDisease (OPD2)  ---BR196G
09UniProtVAR_015716R196WFLNA_HUMANDisease (OPD1)137853317BR196W
10UniProtVAR_015717A200SFLNA_HUMANDisease (OPD2)  ---BA200S
11UniProtVAR_031308D203YFLNA_HUMANDisease (OPD1)137853314BD203Y
12UniProtVAR_015700P207LFLNA_HUMANDisease (OPD1)28935469BP207L
13UniProtVAR_058720C210FFLNA_HUMANDisease (OPD2)137853318BC210F
14UniProtVAR_015701E254KFLNA_HUMANDisease (OPD2)28935470BE254K
15UniProtVAR_076501A267TFLNA_HUMANUnclassified (OPD1)  ---BA267T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (3, 7)

Asymmetric Unit (3, 7)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.FLNA_HUMAN43-149
166-266
 
  3A:43-149
A:166-264
B:172-266
2ACTININ_1PS00019 Actinin-type actin-binding domain signature 1.FLNA_HUMAN45-54
 
  2A:45-54
B:45-54
3ACTININ_2PS00020 Actinin-type actin-binding domain signature 2.FLNA_HUMAN121-145
 
  2A:121-145
B:121-145
Biological Unit 1 (3, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.FLNA_HUMAN43-149
166-266
 
  2A:43-149
A:166-264
-
2ACTININ_1PS00019 Actinin-type actin-binding domain signature 1.FLNA_HUMAN45-54
 
  1A:45-54
-
3ACTININ_2PS00020 Actinin-type actin-binding domain signature 2.FLNA_HUMAN121-145
 
  1A:121-145
-
Biological Unit 2 (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.FLNA_HUMAN43-149
166-266
 
  1-
-
B:172-266
2ACTININ_1PS00019 Actinin-type actin-binding domain signature 1.FLNA_HUMAN45-54
 
  1-
B:45-54
3ACTININ_2PS00020 Actinin-type actin-binding domain signature 2.FLNA_HUMAN121-145
 
  1-
B:121-145

(-) Exons   (4, 8)

Asymmetric Unit (4, 8)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000003698501bENSE00001910769X:153602994-153602874121FLNA_HUMAN-00--
1.2aENST000003698502aENSE00001451045X:153599729-153599241489FLNA_HUMAN1-1251252A:43-125
B:44-125
83
82
1.3ENST000003698503ENSE00001761667X:153596458-153596210249FLNA_HUMAN125-208842A:125-208 (gaps)
B:125-208 (gaps)
84
84
1.4ENST000003698504ENSE00001600780X:153596106-15359600998FLNA_HUMAN208-240332A:208-240
B:208-240
33
33
1.5ENST000003698505ENSE00001593508X:153595912-153595765148FLNA_HUMAN241-290502A:241-264
B:241-269
24
29
1.6ENST000003698506ENSE00001766993X:153595218-153595100119FLNA_HUMAN290-329400--
1.7ENST000003698507ENSE00001785883X:153595007-15359493078FLNA_HUMAN330-355260--
1.8ENST000003698508ENSE00001609326X:153594838-153594676163FLNA_HUMAN356-410550--
1.9ENST000003698509ENSE00001666330X:153594592-153594392201FLNA_HUMAN410-477680--
1.10ENST0000036985010ENSE00001801647X:153593854-153593717138FLNA_HUMAN477-523470--
1.11aENST0000036985011aENSE00001611867X:153593627-153593504124FLNA_HUMAN523-564420--
1.12aENST0000036985012aENSE00001667367X:153593325-153593189137FLNA_HUMAN564-610470--
1.12cENST0000036985012cENSE00001629480X:153593087-153592894194FLNA_HUMAN610-674650--
1.13ENST0000036985013ENSE00001779880X:153592740-153592627114FLNA_HUMAN675-712380--
1.14ENST0000036985014ENSE00001608264X:153592533-153592390144FLNA_HUMAN713-760480--
1.15ENST0000036985015ENSE00001763171X:153591152-153591029124FLNA_HUMAN761-802420--
1.16ENST0000036985016ENSE00001721592X:153590946-153590786161FLNA_HUMAN802-855540--
1.17ENST0000036985017ENSE00001711674X:153590700-15359061091FLNA_HUMAN856-886310--
1.18ENST0000036985018ENSE00001671781X:153590516-153590347170FLNA_HUMAN886-942570--
1.19ENST0000036985019ENSE00001747813X:153590155-153590038118FLNA_HUMAN943-982400--
1.20ENST0000036985020ENSE00001730581X:153589938-153589676263FLNA_HUMAN982-1069880--
1.21aENST0000036985021aENSE00001650468X:153588955-153588358598FLNA_HUMAN1070-12692000--
1.22ENST0000036985022ENSE00001799214X:153588273-153588100174FLNA_HUMAN1269-1327590--
1.23aENST0000036985023aENSE00001747211X:153588014-153587852163FLNA_HUMAN1327-1381550--
1.24ENST0000036985024ENSE00001776303X:153587774-153587614161FLNA_HUMAN1381-1435550--
1.25ENST0000036985025ENSE00001730699X:153587522-153587352171FLNA_HUMAN1435-1492580--
1.26bENST0000036985026bENSE00001594409X:153586936-153586813124FLNA_HUMAN1492-1533420--
1.27ENST0000036985027ENSE00001770199X:153586723-153586567157FLNA_HUMAN1533-1585530--
1.28bENST0000036985028bENSE00001690672X:153585991-153585802190FLNA_HUMAN1586-1649640--
1.29ENST0000036985029ENSE00001616004X:153585642-15358561924FLNA_HUMAN1649-165790--
1.30aENST0000036985030aENSE00001716324X:153583440-153583193248FLNA_HUMAN1657-1739830--
1.31aENST0000036985031aENSE00001764396X:153583079-15358298496FLNA_HUMAN1740-1771320--
1.32ENST0000036985032ENSE00001736547X:153582851-153582749103FLNA_HUMAN1772-1806350--
1.33aENST0000036985033aENSE00001766949X:153582659-153582519141FLNA_HUMAN1806-1853480--
1.33cENST0000036985033cENSE00001653383X:153582411-153582283129FLNA_HUMAN1853-1896440--
1.34aENST0000036985034aENSE00001618870X:153582095-153581922174FLNA_HUMAN1896-1954590--
1.35bENST0000036985035bENSE00002195079X:153581825-153581664162FLNA_HUMAN1954-2008550--
1.36bENST0000036985036bENSE00001723855X:153581572-153581369204FLNA_HUMAN2008-2076690--
1.36eENST0000036985036eENSE00001619614X:153581292-153581140153FLNA_HUMAN2076-2127520--
1.36hENST0000036985036hENSE00001651775X:153581043-153580921123FLNA_HUMAN2127-2168420--
1.37ENST0000036985037ENSE00001674826X:153580815-153580549267FLNA_HUMAN2168-2257900--
1.38aENST0000036985038aENSE00001618637X:153580389-153580252138FLNA_HUMAN2257-2303470--
1.39aENST0000036985039aENSE00002154533X:153580064-153579949116FLNA_HUMAN2303-2341390--
1.39dENST0000036985039dENSE00001796872X:153579409-153579277133FLNA_HUMAN2342-2386450--
1.39fENST0000036985039fENSE00001667055X:153578575-153578399177FLNA_HUMAN2386-2445600--
1.39gENST0000036985039gENSE00001781401X:153578235-153578017219FLNA_HUMAN2445-2518740--
1.40ENST0000036985040ENSE00001665083X:153577933-153577730204FLNA_HUMAN2518-2586690--
1.41dENST0000036985041dENSE00001866943X:153577404-153577016389FLNA_HUMAN2586-2647620--

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:210
 aligned with FLNA_HUMAN | P21333 from UniProtKB/Swiss-Prot  Length:2647

    Alignment length:222
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262  
           FLNA_HUMAN    43 KIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQF 264
               SCOP domains d3hora1 A:43-151 automated matches                                                                           --------------d3hora2 A:166-264 automated matches                                                                 SCOP domains
               CATH domains 3horA01 A:43-152 Actin-binding Protein, T-fimbrin; domain 1                                                   ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh....------------.hhhhhhhhhhhhhh..............hhhhhhhhhhhh.....hhhhh...hhhhhhhhhhhhhhhhhh.....hhhhhh....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------------------------------------V-------------------V-------------------------V--------------------F--------------------P-F--------------S--------G---S--Y---L--F-------------------------------------------K---------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------W-------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) CH  PDB: A:43-149 UniProt: 43-149                                                                          ----------------CH  PDB: A:166-264 UniProt: 166-266                                                                 PROSITE (1)
                PROSITE (2) --ACTININ_1 ------------------------------------------------------------------ACTININ_2  PDB: A:121-145----------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.2a  PDB: A:43-125 UniProt: 1-125 [INCOMPLETE]                               ----------------------------------------------------------------------------------Exon 1.4  PDB: A:208-240         Exon 1.5  PDB: A:241-264 Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------Exon 1.3  PDB: A:125-208 (gaps) UniProt: 125-208                                    -------------------------------------------------------- Transcript 1 (2)
                 3hor A  43 KIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMP------------QTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQF 264
                                    52        62        72        82        92       102       112       122       132       142       152|        -   |   172       182       192       202       212       222       232       242       252       262  
                                                                                                                                        153          166                                                                                                  

Chain B from PDB  Type:PROTEIN  Length:210
 aligned with FLNA_HUMAN | P21333 from UniProtKB/Swiss-Prot  Length:2647

    Alignment length:226
                                    53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263      
           FLNA_HUMAN    44 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQFPKAKL 269
               SCOP domains d3horb1 B:44-151 automated matches                                                                          --------------------d3horb2 B:172-269 automated matches                                                                SCOP domains
               CATH domains 3horB01 B:44-152 Actin-binding Protein, T-fimbrin; domain 1                                                  --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh................hhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh......----------------hhhhhhhhh..............hhhhhhhhhhhh.....hhhhh...hhhhhhhhhhhhhhhhhh.....hhhhhh....hhhhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------V-------------------V-------------------------V--------------------F----------------------F--------------S--------G---S--Y---L--F-------------------------------------------K------------T-- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) CH  PDB: - UniProt: 43-149                                                                                ----------------CH  PDB: B:172-266 UniProt: 166-266                                                                  --- PROSITE (1)
                PROSITE (2) -ACTININ_1 ------------------------------------------------------------------ACTININ_2  PDB: B:121-145---------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.2a  PDB: B:44-125 UniProt: 1-125 [INCOMPLETE]                              ----------------------------------------------------------------------------------Exon 1.4  PDB: B:208-240         Exon 1.5  PDB: B:241-269      Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------Exon 1.3  PDB: B:125-208 (gaps) UniProt: 125-208                                    ------------------------------------------------------------- Transcript 1 (2)
                 3hor B  44 IQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMW----------------LLGWIQNKLPQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDEHSVMTYLSQFPKAKL 269
                                    53        63        73        83        93       103       113       123       133       143       153 |       -       173       183       193       203       213       223       233       243       253       263      
                                                                                                                                         155              172                                                                                                 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (1, 2)

Asymmetric Unit

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HOR)

(-) Gene Ontology  (65, 65)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (FLNA_HUMAN | P21333)
molecular function
    GO:0034988    Fc-gamma receptor I complex binding    Interacting selectively and non-covalently with one or more specific sites on the Fc-gamma receptor I complex. The complex functions primarily as an activating receptor for IgG.
    GO:0001664    G-protein coupled receptor binding    Interacting selectively and non-covalently with a G-protein coupled receptor.
    GO:0051020    GTPase binding    Interacting selectively and non-covalently with a GTPase, any enzyme that catalyzes the hydrolysis of GTP.
    GO:0048365    Rac GTPase binding    Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
    GO:0017160    Ral GTPase binding    Interacting selectively and non-covalently with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases.
    GO:0017048    Rho GTPase binding    Interacting selectively and non-covalently with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton.
    GO:0046332    SMAD binding    Interacting selectively and non-covalently with a SMAD signaling protein.
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0051015    actin filament binding    Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
    GO:0019900    kinase binding    Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
    GO:0031852    mu-type opioid receptor binding    Interacting selectively and non-covalently with a mu-type opioid receptor.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
    GO:0031267    small GTPase binding    Interacting selectively and non-covalently with a small monomeric GTPase.
    GO:0008134    transcription factor binding    Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
biological process
    GO:0051764    actin crosslink formation    The process in which two or more actin filaments are connected together by proteins that act as crosslinks between the filaments. The crosslinked filaments may be on the same or differing axes.
    GO:0031532    actin cytoskeleton reorganization    A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0007195    adenylate cyclase-inhibiting dopamine receptor signaling pathway    The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, where the pathway proceeds with inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP (cAMP).
    GO:0034329    cell junction assembly    A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.
    GO:0030030    cell projection organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0051220    cytoplasmic sequestering of protein    The selective interaction of a protein with specific molecules in the cytoplasm, thereby inhibiting its transport into other areas of the cell.
    GO:0045184    establishment of protein localization    The directed movement of a protein to a specific location.
    GO:0042789    mRNA transcription from RNA polymerase II promoter    The cellular synthesis of messenger RNA (mRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.
    GO:0090307    mitotic spindle assembly    The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of mitosis.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0042177    negative regulation of protein catabolic process    Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
    GO:0043433    negative regulation of sequence-specific DNA binding transcription factor activity    Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
    GO:0016479    negative regulation of transcription from RNA polymerase I promoter    Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase I promoter.
    GO:0030168    platelet activation    A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.
    GO:0070527    platelet aggregation    The adhesion of one platelet to one or more other platelets via adhesion molecules.
    GO:0002576    platelet degranulation    The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
    GO:0043123    positive regulation of I-kappaB kinase/NF-kappaB signaling    Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
    GO:2001046    positive regulation of integrin-mediated signaling pathway    Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.
    GO:1900026    positive regulation of substrate adhesion-dependent cell spreading    Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.
    GO:0042993    positive regulation of transcription factor import into nucleus    Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.
    GO:0034394    protein localization to cell surface    A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.
    GO:0050821    protein stabilization    Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.
    GO:0043113    receptor clustering    The receptor metabolic process that results in grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response.
    GO:0030334    regulation of cell migration    Any process that modulates the frequency, rate or extent of cell migration.
    GO:0071526    semaphorin-plexin signaling pathway    A series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.
    GO:0044319    wound healing, spreading of cells    The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.
cellular component
    GO:0031523    Myb complex    A multisubunit complex consisting of Myb and other proteins that regulates site specific DNA replication, gene amplification and transcriptional repression.
    GO:0015629    actin cytoskeleton    The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
    GO:0005884    actin filament    A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
    GO:0097440    apical dendrite    A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0005911    cell-cell junction    A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
    GO:0030863    cortical cytoskeleton    The portion of the cytoskeleton that lies just beneath the plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0043198    dendritic shaft    Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0031941    filamentous actin    A two-stranded helical polymer of the protein actin.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005730    nucleolus    A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FLNA_HUMAN | P213332aav 2bp3 2brq 2j3s 2jf1 2k3t 2k7p 2k7q 2mtp 2w0p 2wfn 3cnk 3hoc 3hop 3isw 3rgh 4m9p 4p3w

(-) Related Entries Specified in the PDB File

3hoc DISEASE ASSOCIATED POINT MUTANT
3hop HIGHER RESOLUTION STRUCTURE, WITH DISULFIDE BOND