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3HOR
Asym. Unit
Info
Asym.Unit (146 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (71 KB)
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(1)
Title
:
STRUCTURE OF THE ACTIN-BINDING DOMAIN OF HUMAN FILAMIN A (REDUCED)
Authors
:
A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Date
:
03 Jun 09 (Deposition) - 13 Oct 09 (Release) - 01 Dec 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Calponin Homology Domain, Actin Binding Domain, Acetylation, Actin-Binding, Alternative Splicing, Cytoplasm, Cytoskeleton, Disease Mutation, Phosphoprotein, Polymorphism, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Skeletal Dysplasias Due To Filamin A Mutations Result From A Gain-Of-Function Mechanism Distinct From Allelic Neurological Disorders
Hum. Mol. Genet. V. 18 4791 2009
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1b: PHOSPHATE ION (PO4b)
1c: PHOSPHATE ION (PO4c)
1d: PHOSPHATE ION (PO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PO4
4
Ligand/Ion
PHOSPHATE ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:220 , PRO A:221 , VAL A:222 , THR A:223
BINDING SITE FOR RESIDUE PO4 A 270
2
AC2
SOFTWARE
SER A:61 , LYS A:62 , ARG A:63 , ARG A:76
BINDING SITE FOR RESIDUE PO4 A 271
3
AC3
SOFTWARE
LYS B:220 , PRO B:221 , VAL B:222 , THR B:223
BINDING SITE FOR RESIDUE PO4 B 270
4
AC4
SOFTWARE
SER B:194 , ARG B:196
BINDING SITE FOR RESIDUE PO4 B 271
[
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]
SAPs(SNPs)/Variants
(13, 25)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_015699 (E82V, chain A/B, )
02: VAR_031305 (M102V, chain A/B, )
03: VAR_031306 (A128V, chain A/B, )
04: VAR_031307 (S149F, chain A/B, )
05: VAR_015713 (Q170P, chain A, )
06: VAR_015714 (L172F, chain A/B, )
07: VAR_015715 (R196G, chain A/B, )
08: VAR_015716 (R196W, chain A/B, )
09: VAR_015717 (A200S, chain A/B, )
10: VAR_031308 (D203Y, chain A/B, )
11: VAR_015700 (P207L, chain A/B, )
12: VAR_058720 (C210F, chain A/B, )
13: VAR_015701 (E254K, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_015699
E
82
V
FLNA_HUMAN
Disease (PVNH1)
28935169
A/B
E
82
V
02
UniProt
VAR_031305
M
102
V
FLNA_HUMAN
Disease (PVNH1)
---
A/B
M
102
V
03
UniProt
VAR_031306
A
128
V
FLNA_HUMAN
Disease (PVNH4)
---
A/B
A
128
V
04
UniProt
VAR_031307
S
149
F
FLNA_HUMAN
Disease (PVNH1)
---
A/B
S
149
F
05
UniProt
VAR_015713
Q
170
P
FLNA_HUMAN
Disease (OPD2)
---
A
Q
170
P
06
UniProt
VAR_015714
L
172
F
FLNA_HUMAN
Disease (OPD1)
---
A/B
L
172
F
07
UniProt
VAR_015715
R
196
G
FLNA_HUMAN
Disease (OPD2)
---
A/B
R
196
G
08
UniProt
VAR_015716
R
196
W
FLNA_HUMAN
Disease (OPD1)
---
A/B
R
196
W
09
UniProt
VAR_015717
A
200
S
FLNA_HUMAN
Disease (OPD2)
---
A/B
A
200
S
10
UniProt
VAR_031308
D
203
Y
FLNA_HUMAN
Disease (OPD1)
---
A/B
D
203
Y
11
UniProt
VAR_015700
P
207
L
FLNA_HUMAN
Disease (OPD1)
28935469
A/B
P
207
L
12
UniProt
VAR_058720
C
210
F
FLNA_HUMAN
Disease (OPD2)
---
A/B
C
210
F
13
UniProt
VAR_015701
E
254
K
FLNA_HUMAN
Disease (OPD2)
28935470
A/B
E
254
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(3, 7)
Info
All PROSITE Patterns/Profiles
1: CH (A:43-149|A:166-264,B:172-266)
2: ACTININ_1 (A:45-54,B:45-54)
3: ACTININ_2 (A:121-145,B:121-145)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
FLNA_HUMAN
43-149
166-266
3
A:43-149
A:166-264
B:172-266
2
ACTININ_1
PS00019
Actinin-type actin-binding domain signature 1.
FLNA_HUMAN
45-54
2
A:45-54
B:45-54
3
ACTININ_2
PS00020
Actinin-type actin-binding domain signature 2.
FLNA_HUMAN
121-145
2
A:121-145
B:121-145
[
close PROSITE info
]
Exons
(4, 8)
Info
All Exons
Exon 1.2a (A:43-125 | B:44-125)
Exon 1.3 (A:125-208 (gaps) | B:125-208 (gaps...)
Exon 1.4 (A:208-240 | B:208-240)
Exon 1.5 (A:241-264 | B:241-269)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1b/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000369850
1b
ENSE00001910769
X:153602994-153602874
121
FLNA_HUMAN
-
0
0
-
-
1.2a
ENST00000369850
2a
ENSE00001451045
X:153599729-153599241
489
FLNA_HUMAN
1-125
125
2
A:43-125
B:44-125
83
82
1.3
ENST00000369850
3
ENSE00001761667
X:153596458-153596210
249
FLNA_HUMAN
125-208
84
2
A:125-208 (gaps)
B:125-208 (gaps)
84
84
1.4
ENST00000369850
4
ENSE00001600780
X:153596106-153596009
98
FLNA_HUMAN
208-240
33
2
A:208-240
B:208-240
33
33
1.5
ENST00000369850
5
ENSE00001593508
X:153595912-153595765
148
FLNA_HUMAN
241-290
50
2
A:241-264
B:241-269
24
29
1.6
ENST00000369850
6
ENSE00001766993
X:153595218-153595100
119
FLNA_HUMAN
290-329
40
0
-
-
1.7
ENST00000369850
7
ENSE00001785883
X:153595007-153594930
78
FLNA_HUMAN
330-355
26
0
-
-
1.8
ENST00000369850
8
ENSE00001609326
X:153594838-153594676
163
FLNA_HUMAN
356-410
55
0
-
-
1.9
ENST00000369850
9
ENSE00001666330
X:153594592-153594392
201
FLNA_HUMAN
410-477
68
0
-
-
1.10
ENST00000369850
10
ENSE00001801647
X:153593854-153593717
138
FLNA_HUMAN
477-523
47
0
-
-
1.11a
ENST00000369850
11a
ENSE00001611867
X:153593627-153593504
124
FLNA_HUMAN
523-564
42
0
-
-
1.12a
ENST00000369850
12a
ENSE00001667367
X:153593325-153593189
137
FLNA_HUMAN
564-610
47
0
-
-
1.12c
ENST00000369850
12c
ENSE00001629480
X:153593087-153592894
194
FLNA_HUMAN
610-674
65
0
-
-
1.13
ENST00000369850
13
ENSE00001779880
X:153592740-153592627
114
FLNA_HUMAN
675-712
38
0
-
-
1.14
ENST00000369850
14
ENSE00001608264
X:153592533-153592390
144
FLNA_HUMAN
713-760
48
0
-
-
1.15
ENST00000369850
15
ENSE00001763171
X:153591152-153591029
124
FLNA_HUMAN
761-802
42
0
-
-
1.16
ENST00000369850
16
ENSE00001721592
X:153590946-153590786
161
FLNA_HUMAN
802-855
54
0
-
-
1.17
ENST00000369850
17
ENSE00001711674
X:153590700-153590610
91
FLNA_HUMAN
856-886
31
0
-
-
1.18
ENST00000369850
18
ENSE00001671781
X:153590516-153590347
170
FLNA_HUMAN
886-942
57
0
-
-
1.19
ENST00000369850
19
ENSE00001747813
X:153590155-153590038
118
FLNA_HUMAN
943-982
40
0
-
-
1.20
ENST00000369850
20
ENSE00001730581
X:153589938-153589676
263
FLNA_HUMAN
982-1069
88
0
-
-
1.21a
ENST00000369850
21a
ENSE00001650468
X:153588955-153588358
598
FLNA_HUMAN
1070-1269
200
0
-
-
1.22
ENST00000369850
22
ENSE00001799214
X:153588273-153588100
174
FLNA_HUMAN
1269-1327
59
0
-
-
1.23a
ENST00000369850
23a
ENSE00001747211
X:153588014-153587852
163
FLNA_HUMAN
1327-1381
55
0
-
-
1.24
ENST00000369850
24
ENSE00001776303
X:153587774-153587614
161
FLNA_HUMAN
1381-1435
55
0
-
-
1.25
ENST00000369850
25
ENSE00001730699
X:153587522-153587352
171
FLNA_HUMAN
1435-1492
58
0
-
-
1.26b
ENST00000369850
26b
ENSE00001594409
X:153586936-153586813
124
FLNA_HUMAN
1492-1533
42
0
-
-
1.27
ENST00000369850
27
ENSE00001770199
X:153586723-153586567
157
FLNA_HUMAN
1533-1585
53
0
-
-
1.28b
ENST00000369850
28b
ENSE00001690672
X:153585991-153585802
190
FLNA_HUMAN
1586-1649
64
0
-
-
1.29
ENST00000369850
29
ENSE00001616004
X:153585642-153585619
24
FLNA_HUMAN
1649-1657
9
0
-
-
1.30a
ENST00000369850
30a
ENSE00001716324
X:153583440-153583193
248
FLNA_HUMAN
1657-1739
83
0
-
-
1.31a
ENST00000369850
31a
ENSE00001764396
X:153583079-153582984
96
FLNA_HUMAN
1740-1771
32
0
-
-
1.32
ENST00000369850
32
ENSE00001736547
X:153582851-153582749
103
FLNA_HUMAN
1772-1806
35
0
-
-
1.33a
ENST00000369850
33a
ENSE00001766949
X:153582659-153582519
141
FLNA_HUMAN
1806-1853
48
0
-
-
1.33c
ENST00000369850
33c
ENSE00001653383
X:153582411-153582283
129
FLNA_HUMAN
1853-1896
44
0
-
-
1.34a
ENST00000369850
34a
ENSE00001618870
X:153582095-153581922
174
FLNA_HUMAN
1896-1954
59
0
-
-
1.35b
ENST00000369850
35b
ENSE00002195079
X:153581825-153581664
162
FLNA_HUMAN
1954-2008
55
0
-
-
1.36b
ENST00000369850
36b
ENSE00001723855
X:153581572-153581369
204
FLNA_HUMAN
2008-2076
69
0
-
-
1.36e
ENST00000369850
36e
ENSE00001619614
X:153581292-153581140
153
FLNA_HUMAN
2076-2127
52
0
-
-
1.36h
ENST00000369850
36h
ENSE00001651775
X:153581043-153580921
123
FLNA_HUMAN
2127-2168
42
0
-
-
1.37
ENST00000369850
37
ENSE00001674826
X:153580815-153580549
267
FLNA_HUMAN
2168-2257
90
0
-
-
1.38a
ENST00000369850
38a
ENSE00001618637
X:153580389-153580252
138
FLNA_HUMAN
2257-2303
47
0
-
-
1.39a
ENST00000369850
39a
ENSE00002154533
X:153580064-153579949
116
FLNA_HUMAN
2303-2341
39
0
-
-
1.39d
ENST00000369850
39d
ENSE00001796872
X:153579409-153579277
133
FLNA_HUMAN
2342-2386
45
0
-
-
1.39f
ENST00000369850
39f
ENSE00001667055
X:153578575-153578399
177
FLNA_HUMAN
2386-2445
60
0
-
-
1.39g
ENST00000369850
39g
ENSE00001781401
X:153578235-153578017
219
FLNA_HUMAN
2445-2518
74
0
-
-
1.40
ENST00000369850
40
ENSE00001665083
X:153577933-153577730
204
FLNA_HUMAN
2518-2586
69
0
-
-
1.41d
ENST00000369850
41d
ENSE00001866943
X:153577404-153577016
389
FLNA_HUMAN
2586-2647
62
0
-
-
[
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3hora1 (A:43-151)
1b: SCOP_d3hora2 (A:166-264)
1c: SCOP_d3horb1 (B:44-151)
1d: SCOP_d3horb2 (B:172-269)
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Class
:
All alpha proteins
(14657)
Fold
:
CH domain-like
(55)
Superfamily
:
Calponin-homology domain, CH-domain
(53)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(23)
1a
d3hora1
A:43-151
1b
d3hora2
A:166-264
1c
d3horb1
B:44-151
1d
d3horb2
B:172-269
[
close SCOP info
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3horA01 (A:43-152)
1b: CATH_3horB01 (B:44-152)
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Organisms
(
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Homologous Superfamily
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Human (Homo sapiens)
(39)
1a
3horA01
A:43-152
1b
3horB01
B:44-152
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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