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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE MIGFILIN PEPTIDE
 
Authors :  S. Ruskamo, J. Ylanne
Date :  20 Aug 08  (Deposition) - 30 Sep 08  (Release) - 16 Dec 08  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Alternative Splicing, Cytoskeleton/Complex, Phosphoprotein, Disease Mutation, Immunoglobulin Like, Zinc, Filamin, Complex, Integrin, Migfilin, Receptor, Polymorphism, Cytoskeleton, Actin-Binding, Cell Junction, Cell Adhesion, Metal-Binding, Cytoplasm, Lim Domain, Cell Shape, Acetylation (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Lad, P. Jiang, S. Ruskamo, D. S. Harburger, J. Ylanne, I. D. Campbell, D. A. Calderwood
Structural Basis Of The Migfilin-Filamin Interaction And Competition With Integrin {Beta} Tails.
J. Biol. Chem. V. 283 35154 2008
PubMed-ID: 18829455  |  Reference-DOI: 10.1074/JBC.M802592200

(-) Compounds

Molecule 1 - FILAMIN-A
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX-4T-3
    Expression System StrainBL21
    Expression System Taxid511693
    FragmentIG-21, RESIDUES 2236-2329
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymALPHA-FILAMIN, FILAMIN-1, ENDOTHELIAL ACTIN-BINDING PROTEIN, ACTIN-BINDING PROTEIN 280, ABP-280, NONMUSCLE FILAMIN
 
Molecule 2 - FILAMIN-BINDING LIM PROTEIN 1
    ChainsC
    FragmentRESIDUES 5-19
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymMITOGEN-INDUCIBLE 2-INTERACTING PROTEIN, MIGFILIN
    SyntheticYES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:2242 , ARG B:2242BINDING SITE FOR RESIDUE SO4 A 3329
2AC2SOFTWARELYS A:2310 , HIS A:2315 , HOH B:2033 , HOH B:2034 , PRO B:2278 , LYS B:2280 , GLU B:2282 , GLY B:2303 , ASP B:2304BINDING SITE FOR RESIDUE SO4 B 3330

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2W0P)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ser A:2319 -Pro A:2320
2Ser B:2319 -Pro B:2320

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2W0P)

(-) PROSITE Motifs  (1, 2)

Asymmetric/Biological Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FILAMIN_REPEATPS50194 Filamin/ABP280 repeat profile.FLNA_HUMAN276-374
376-474
475-570
571-663
667-763
764-866
867-965
966-1061
1062-1154
1155-1249
1250-1349
1350-1442
1443-1539
1540-1636
1649-1740
1779-1860
1860-1952
1950-2039
2042-2134
2132-2230
2233-2325
2327-2420
 
2424-2516
2552-2646
  2-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
A:2327-2328
B:2327-2329
-
-

(-) Exons   (3, 6)

Asymmetric/Biological Unit (3, 6)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000003698501bENSE00001910769X:153602994-153602874121FLNA_HUMAN-00--
1.2aENST000003698502aENSE00001451045X:153599729-153599241489FLNA_HUMAN1-1251250--
1.3ENST000003698503ENSE00001761667X:153596458-153596210249FLNA_HUMAN125-208840--
1.4ENST000003698504ENSE00001600780X:153596106-15359600998FLNA_HUMAN208-240330--
1.5ENST000003698505ENSE00001593508X:153595912-153595765148FLNA_HUMAN241-290500--
1.6ENST000003698506ENSE00001766993X:153595218-153595100119FLNA_HUMAN290-329400--
1.7ENST000003698507ENSE00001785883X:153595007-15359493078FLNA_HUMAN330-355260--
1.8ENST000003698508ENSE00001609326X:153594838-153594676163FLNA_HUMAN356-410550--
1.9ENST000003698509ENSE00001666330X:153594592-153594392201FLNA_HUMAN410-477680--
1.10ENST0000036985010ENSE00001801647X:153593854-153593717138FLNA_HUMAN477-523470--
1.11aENST0000036985011aENSE00001611867X:153593627-153593504124FLNA_HUMAN523-564420--
1.12aENST0000036985012aENSE00001667367X:153593325-153593189137FLNA_HUMAN564-610470--
1.12cENST0000036985012cENSE00001629480X:153593087-153592894194FLNA_HUMAN610-674650--
1.13ENST0000036985013ENSE00001779880X:153592740-153592627114FLNA_HUMAN675-712380--
1.14ENST0000036985014ENSE00001608264X:153592533-153592390144FLNA_HUMAN713-760480--
1.15ENST0000036985015ENSE00001763171X:153591152-153591029124FLNA_HUMAN761-802420--
1.16ENST0000036985016ENSE00001721592X:153590946-153590786161FLNA_HUMAN802-855540--
1.17ENST0000036985017ENSE00001711674X:153590700-15359061091FLNA_HUMAN856-886310--
1.18ENST0000036985018ENSE00001671781X:153590516-153590347170FLNA_HUMAN886-942570--
1.19ENST0000036985019ENSE00001747813X:153590155-153590038118FLNA_HUMAN943-982400--
1.20ENST0000036985020ENSE00001730581X:153589938-153589676263FLNA_HUMAN982-1069880--
1.21aENST0000036985021aENSE00001650468X:153588955-153588358598FLNA_HUMAN1070-12692000--
1.22ENST0000036985022ENSE00001799214X:153588273-153588100174FLNA_HUMAN1269-1327590--
1.23aENST0000036985023aENSE00001747211X:153588014-153587852163FLNA_HUMAN1327-1381550--
1.24ENST0000036985024ENSE00001776303X:153587774-153587614161FLNA_HUMAN1381-1435550--
1.25ENST0000036985025ENSE00001730699X:153587522-153587352171FLNA_HUMAN1435-1492580--
1.26bENST0000036985026bENSE00001594409X:153586936-153586813124FLNA_HUMAN1492-1533420--
1.27ENST0000036985027ENSE00001770199X:153586723-153586567157FLNA_HUMAN1533-1585530--
1.28bENST0000036985028bENSE00001690672X:153585991-153585802190FLNA_HUMAN1586-1649640--
1.29ENST0000036985029ENSE00001616004X:153585642-15358561924FLNA_HUMAN1649-165790--
1.30aENST0000036985030aENSE00001716324X:153583440-153583193248FLNA_HUMAN1657-1739830--
1.31aENST0000036985031aENSE00001764396X:153583079-15358298496FLNA_HUMAN1740-1771320--
1.32ENST0000036985032ENSE00001736547X:153582851-153582749103FLNA_HUMAN1772-1806350--
1.33aENST0000036985033aENSE00001766949X:153582659-153582519141FLNA_HUMAN1806-1853480--
1.33cENST0000036985033cENSE00001653383X:153582411-153582283129FLNA_HUMAN1853-1896440--
1.34aENST0000036985034aENSE00001618870X:153582095-153581922174FLNA_HUMAN1896-1954590--
1.35bENST0000036985035bENSE00002195079X:153581825-153581664162FLNA_HUMAN1954-2008550--
1.36bENST0000036985036bENSE00001723855X:153581572-153581369204FLNA_HUMAN2008-2076690--
1.36eENST0000036985036eENSE00001619614X:153581292-153581140153FLNA_HUMAN2076-2127520--
1.36hENST0000036985036hENSE00001651775X:153581043-153580921123FLNA_HUMAN2127-2168420--
1.37ENST0000036985037ENSE00001674826X:153580815-153580549267FLNA_HUMAN2168-2257902A:2236-2257
B:2236-2257
22
22
1.38aENST0000036985038aENSE00001618637X:153580389-153580252138FLNA_HUMAN2257-2303472A:2257-2303
B:2257-2303
47
47
1.39aENST0000036985039aENSE00002154533X:153580064-153579949116FLNA_HUMAN2303-2341392A:2303-2328
B:2303-2329
26
27
1.39dENST0000036985039dENSE00001796872X:153579409-153579277133FLNA_HUMAN2342-2386450--
1.39fENST0000036985039fENSE00001667055X:153578575-153578399177FLNA_HUMAN2386-2445600--
1.39gENST0000036985039gENSE00001781401X:153578235-153578017219FLNA_HUMAN2445-2518740--
1.40ENST0000036985040ENSE00001665083X:153577933-153577730204FLNA_HUMAN2518-2586690--
1.41dENST0000036985041dENSE00001866943X:153577404-153577016389FLNA_HUMAN2586-2647620--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:93
 aligned with FLNA_HUMAN | P21333 from UniProtKB/Swiss-Prot  Length:2647

    Alignment length:93
                                  2245      2255      2265      2275      2285      2295      2305      2315      2325   
          FLNA_HUMAN   2236 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASP 2328
               SCOP domains d2w0pa_ A: Filamin a                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeehhhhh.ee....eeeeeehhhhh...eeeeeee....eeeeee.....eeeeee....eeeeeeeee..ee.....eeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE FILAMIN_REPEAT  PDB: - UniProt: 2233-2325                                                 -FI PROSITE
           Transcript 1 (1) Exon 1.37 [INCOMPLETE]---------------------------------------------Exon 1.39a [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) ---------------------Exon 1.38a  PDB: A:2257-2303 UniProt: 2257-2303------------------------- Transcript 1 (2)
                2w0p A 2236 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASP 2328
                                  2245      2255      2265      2275      2285      2295      2305      2315      2325   

Chain B from PDB  Type:PROTEIN  Length:94
 aligned with FLNA_HUMAN | P21333 from UniProtKB/Swiss-Prot  Length:2647

    Alignment length:94
                                  2245      2255      2265      2275      2285      2295      2305      2315      2325    
          FLNA_HUMAN   2236 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPS 2329
               SCOP domains d2w0pb_ B: Filamin a                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Filamin-2w0pB01 B:2236-2322                                                            ------- Pfam domains (1)
           Pfam domains (2) Filamin-2w0pB02 B:2236-2322                                                            ------- Pfam domains (2)
         Sec.struct. author .hhhhheeehhhhh.......eeeeee........eeeeeee....eeeeee.....eeeeee....eeeeeeeee.................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE FILAMIN_REPEAT  PDB: - UniProt: 2233-2325                                                 -FIL PROSITE
           Transcript 1 (1) Exon 1.37 [INCOMPLETE]---------------------------------------------Exon 1.39a  PDB: B:2303-232 Transcript 1 (1)
           Transcript 1 (2) ---------------------Exon 1.38a  PDB: B:2257-2303 UniProt: 2257-2303-------------------------- Transcript 1 (2)
                2w0p B 2236 GGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSKAEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVPVASPS 2329
                                  2245      2255      2265      2275      2285      2295      2305      2315      2325    

Chain C from PDB  Type:PROTEIN  Length:9
 aligned with FBLI1_HUMAN | Q8WUP2 from UniProtKB/Swiss-Prot  Length:373

    Alignment length:9
         FBLI1_HUMAN      8 RVASSVFIT   16
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author .eeeeeeee Sec.struct. author
                 SAPs(SNPs) --------- SAPs(SNPs)
                    PROSITE --------- PROSITE
                 Transcript --------- Transcript
                2w0p C    8 RVASSVFIT   16

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2W0P)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: E-set (290)

(-) Gene Ontology  (74, 81)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (FLNA_HUMAN | P21333)
molecular function
    GO:0034988    Fc-gamma receptor I complex binding    Interacting selectively and non-covalently with one or more specific sites on the Fc-gamma receptor I complex. The complex functions primarily as an activating receptor for IgG.
    GO:0001664    G-protein coupled receptor binding    Interacting selectively and non-covalently with a G-protein coupled receptor.
    GO:0051020    GTPase binding    Interacting selectively and non-covalently with a GTPase, any enzyme that catalyzes the hydrolysis of GTP.
    GO:0048365    Rac GTPase binding    Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
    GO:0017160    Ral GTPase binding    Interacting selectively and non-covalently with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases.
    GO:0017048    Rho GTPase binding    Interacting selectively and non-covalently with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton.
    GO:0046332    SMAD binding    Interacting selectively and non-covalently with a SMAD signaling protein.
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0051015    actin filament binding    Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
    GO:0019900    kinase binding    Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
    GO:0031852    mu-type opioid receptor binding    Interacting selectively and non-covalently with a mu-type opioid receptor.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
    GO:0031267    small GTPase binding    Interacting selectively and non-covalently with a small monomeric GTPase.
    GO:0008134    transcription factor binding    Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
biological process
    GO:0051764    actin crosslink formation    The process in which two or more actin filaments are connected together by proteins that act as crosslinks between the filaments. The crosslinked filaments may be on the same or differing axes.
    GO:0031532    actin cytoskeleton reorganization    A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0007195    adenylate cyclase-inhibiting dopamine receptor signaling pathway    The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, where the pathway proceeds with inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP (cAMP).
    GO:0034329    cell junction assembly    A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.
    GO:0030030    cell projection organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0051220    cytoplasmic sequestering of protein    The selective interaction of a protein with specific molecules in the cytoplasm, thereby inhibiting its transport into other areas of the cell.
    GO:0045184    establishment of protein localization    The directed movement of a protein to a specific location.
    GO:0042789    mRNA transcription from RNA polymerase II promoter    The cellular synthesis of messenger RNA (mRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.
    GO:0090307    mitotic spindle assembly    The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of mitosis.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0042177    negative regulation of protein catabolic process    Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
    GO:0043433    negative regulation of sequence-specific DNA binding transcription factor activity    Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
    GO:0016479    negative regulation of transcription from RNA polymerase I promoter    Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase I promoter.
    GO:0030168    platelet activation    A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.
    GO:0070527    platelet aggregation    The adhesion of one platelet to one or more other platelets via adhesion molecules.
    GO:0002576    platelet degranulation    The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
    GO:0043123    positive regulation of I-kappaB kinase/NF-kappaB signaling    Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
    GO:2001046    positive regulation of integrin-mediated signaling pathway    Any process that activates or increases the frequency, rate or extent of integrin-mediated signaling pathway.
    GO:1900026    positive regulation of substrate adhesion-dependent cell spreading    Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.
    GO:0042993    positive regulation of transcription factor import into nucleus    Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.
    GO:0034394    protein localization to cell surface    A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.
    GO:0050821    protein stabilization    Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.
    GO:0043113    receptor clustering    The receptor metabolic process that results in grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response.
    GO:0030334    regulation of cell migration    Any process that modulates the frequency, rate or extent of cell migration.
    GO:0071526    semaphorin-plexin signaling pathway    A series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.
    GO:0044319    wound healing, spreading of cells    The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.
cellular component
    GO:0031523    Myb complex    A multisubunit complex consisting of Myb and other proteins that regulates site specific DNA replication, gene amplification and transcriptional repression.
    GO:0015629    actin cytoskeleton    The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
    GO:0005884    actin filament    A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
    GO:0097440    apical dendrite    A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0005911    cell-cell junction    A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
    GO:0030863    cortical cytoskeleton    The portion of the cytoskeleton that lies just beneath the plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0043198    dendritic shaft    Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0031941    filamentous actin    A two-stranded helical polymer of the protein actin.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005730    nucleolus    A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.

Chain C   (FBLI1_HUMAN | Q8WUP2)
molecular function
    GO:0031005    filamin binding    Interacting selectively and non-covalently with a filamin, any member of a family of high molecular mass cytoskeletal proteins that crosslink actin filaments to form networks and stress fibers. Filamins contain an amino-terminal alpha-actinin-like actin binding domain, which is followed by a rod-domain composed of 4 to 24 100-residue repetitive segments including a carboxy-terminal dimerization domain.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0034329    cell junction assembly    A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.
    GO:0008360    regulation of cell shape    Any process that modulates the surface configuration of a cell.
    GO:0033623    regulation of integrin activation    Any process that modulates the frequency, rate, or extent of integrin activation.
    GO:0016337    single organismal cell-cell adhesion    The attachment of one cell to another cell via adhesion molecules, where both cells are part of the same organism.
cellular component
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0001725    stress fiber    A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FBLI1_HUMAN | Q8WUP22k9u 4p3w
        FLNA_HUMAN | P213332aav 2bp3 2brq 2j3s 2jf1 2k3t 2k7p 2k7q 2mtp 2wfn 3cnk 3hoc 3hop 3hor 3isw 3rgh 4m9p 4p3w

(-) Related Entries Specified in the PDB File

2aav SOLUTION NMR STRUCTURE OF FILAMIN A DOMAIN 17
2bp3 CRYSTAL STRUCTURE OF FILAMIN A DOMAIN 17 AND GPIB ALPHA CYTOPLASMIC DOMAIN COMPLEX
2brq CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE INTEGRIN BETA7 CYTOPLASMIC TAIL PEPTIDE
2j3s CRYSTAL STRUCTURE OF THE HUMAN FILAMIN A IG DOMAINS 19 TO 21
2jf1 CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE INTEGRIN BETA2 CYTOPLASMIC TAIL PEPTIDE