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3HOR
Biol. Unit 1
Info
Asym.Unit (146 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (71 KB)
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(1)
Title
:
STRUCTURE OF THE ACTIN-BINDING DOMAIN OF HUMAN FILAMIN A (REDUCED)
Authors
:
A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Date
:
03 Jun 09 (Deposition) - 13 Oct 09 (Release) - 01 Dec 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Calponin Homology Domain, Actin Binding Domain, Acetylation, Actin-Binding, Alternative Splicing, Cytoplasm, Cytoskeleton, Disease Mutation, Phosphoprotein, Polymorphism, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. R. Clark, G. M. Sawyer, S. P. Robertson, A. J. Sutherland-Smith
Skeletal Dysplasias Due To Filamin A Mutations Result From A Gain-Of-Function Mechanism Distinct From Allelic Neurological Disorders
Hum. Mol. Genet. V. 18 4791 2009
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1b: PHOSPHATE ION (PO4b)
1c: PHOSPHATE ION (PO4c)
1d: PHOSPHATE ION (PO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:220 , PRO A:221 , VAL A:222 , THR A:223
BINDING SITE FOR RESIDUE PO4 A 270
2
AC2
SOFTWARE
SER A:61 , LYS A:62 , ARG A:63 , ARG A:76
BINDING SITE FOR RESIDUE PO4 A 271
[
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SAPs(SNPs)/Variants
(13, 13)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_015699 (E82V, chain A, )
02: VAR_031305 (M102V, chain A, )
03: VAR_031306 (A128V, chain A, )
04: VAR_031307 (S149F, chain A, )
05: VAR_015713 (Q170P, chain A, )
06: VAR_015714 (L172F, chain A, )
07: VAR_015715 (R196G, chain A, )
08: VAR_015716 (R196W, chain A, )
09: VAR_015717 (A200S, chain A, )
10: VAR_031308 (D203Y, chain A, )
11: VAR_015700 (P207L, chain A, )
12: VAR_058720 (C210F, chain A, )
13: VAR_015701 (E254K, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_015699
E
82
V
FLNA_HUMAN
Disease (PVNH1)
28935169
A
E
82
V
02
UniProt
VAR_031305
M
102
V
FLNA_HUMAN
Disease (PVNH1)
---
A
M
102
V
03
UniProt
VAR_031306
A
128
V
FLNA_HUMAN
Disease (PVNH4)
---
A
A
128
V
04
UniProt
VAR_031307
S
149
F
FLNA_HUMAN
Disease (PVNH1)
---
A
S
149
F
05
UniProt
VAR_015713
Q
170
P
FLNA_HUMAN
Disease (OPD2)
---
A
Q
170
P
06
UniProt
VAR_015714
L
172
F
FLNA_HUMAN
Disease (OPD1)
---
A
L
172
F
07
UniProt
VAR_015715
R
196
G
FLNA_HUMAN
Disease (OPD2)
---
A
R
196
G
08
UniProt
VAR_015716
R
196
W
FLNA_HUMAN
Disease (OPD1)
---
A
R
196
W
09
UniProt
VAR_015717
A
200
S
FLNA_HUMAN
Disease (OPD2)
---
A
A
200
S
10
UniProt
VAR_031308
D
203
Y
FLNA_HUMAN
Disease (OPD1)
---
A
D
203
Y
11
UniProt
VAR_015700
P
207
L
FLNA_HUMAN
Disease (OPD1)
28935469
A
P
207
L
12
UniProt
VAR_058720
C
210
F
FLNA_HUMAN
Disease (OPD2)
---
A
C
210
F
13
UniProt
VAR_015701
E
254
K
FLNA_HUMAN
Disease (OPD2)
28935470
A
E
254
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(3, 4)
Info
All PROSITE Patterns/Profiles
1: CH (A:166-264)
2: ACTININ_1 (A:45-54)
3: ACTININ_2 (A:121-145)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
FLNA_HUMAN
43-149
166-266
2
A:43-149
A:166-264
-
2
ACTININ_1
PS00019
Actinin-type actin-binding domain signature 1.
FLNA_HUMAN
45-54
1
A:45-54
-
3
ACTININ_2
PS00020
Actinin-type actin-binding domain signature 2.
FLNA_HUMAN
121-145
1
A:121-145
-
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3hora1 (A:43-151)
1b: SCOP_d3hora2 (A:166-264)
1c: SCOP_d3horb1 (B:44-151)
1d: SCOP_d3horb2 (B:172-269)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
CH domain-like
(55)
Superfamily
:
Calponin-homology domain, CH-domain
(53)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(23)
1a
d3hora1
A:43-151
1b
d3hora2
A:166-264
1c
d3horb1
B:44-151
1d
d3horb2
B:172-269
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3horA01 (A:43-152)
1b: CATH_3horB01 (B:44-152)
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Organisms
(
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(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Homologous Superfamily
:
Actin-binding Protein, T-fimbrin; domain 1
(51)
Human (Homo sapiens)
(39)
1a
3horA01
A:43-152
1b
3horB01
B:44-152
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (146 KB)
Header - Asym.Unit
Biol.Unit 1 (72 KB)
Header - Biol.Unit 1
Biol.Unit 2 (71 KB)
Header - Biol.Unit 2
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