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(-) Description

Title :  CRYSTAL STRUCTURE OF CALCIUM BOUND DIMERIC GCAMP2, (#1)
 
Authors :  Q. Wang, B. Shui, M. I. Kotlikoff, H. Sondermann
Date :  13 Oct 08  (Deposition) - 09 Dec 08  (Release) - 30 Dec 08  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Gcamp2, Calcium Sensor, Gfp, Calmodulin, M13, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. Wang, B. Shui, M. I. Kotlikoff, H. Sondermann
Structural Basis For Calcium Sensing By Gcamp2.
Structure V. 16 1817 2008
PubMed-ID: 19081058  |  Reference-DOI: 10.1016/J.STR.2008.10.008
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MYOSIN LIGHT CHAIN KINASE, GREEN FLUORESCENT PROTEIN, CALMODULIN CHIMERA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Common: JELLYFISH
    Organism Scientific: AEQUOREA VICTORIA
    Organism Taxid: 6100

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric Unit (2, 5)
No.NameCountTypeFull Name
1CA4Ligand/IonCALCIUM ION
2CRO1Mod. Amino Acid{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2CRO2Mod. Amino Acid{2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:396 , ASP A:398 , ASN A:400 , TYR A:402 , GLU A:407 , HOH A:590BINDING SITE FOR RESIDUE CA A 505
2AC2SOFTWAREASP A:432 , ASP A:434 , ASP A:436 , GLN A:438 , GLU A:443 , HOH A:537BINDING SITE FOR RESIDUE CA A 506
3AC3SOFTWAREASP A:359 , ASP A:361 , ASN A:363 , THR A:365 , GLU A:370 , HOH A:608BINDING SITE FOR RESIDUE CA A 507
4AC4SOFTWAREASP A:323 , ASP A:325 , ASP A:327 , THR A:329 , GLU A:334 , HOH A:545BINDING SITE FOR RESIDUE CA A 508

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EVU)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Met A:246 -Pro A:247

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (4, 4)

Asymmetric Unit (4, 4)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_GFP_AEQVI_001 *F100YGFP_AEQVI  ---  ---AF258Y
2UniProtVAR_GFP_AEQVI_002 *T108SGFP_AEQVI  ---  ---AT266S
3UniProtVAR_GFP_AEQVI_003 *L141MGFP_AEQVI  ---  ---AL299M
4UniProtVAR_GFP_AEQVI_004 *V219IGFP_AEQVI  ---  ---AR393I
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (4, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_GFP_AEQVI_001 *F100YGFP_AEQVI  ---  ---AF258Y
2UniProtVAR_GFP_AEQVI_002 *T108SGFP_AEQVI  ---  ---AT266S
3UniProtVAR_GFP_AEQVI_003 *L141MGFP_AEQVI  ---  ---AL299M
4UniProtVAR_GFP_AEQVI_004 *V219IGFP_AEQVI  ---  ---AR393I
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.CALM3_RAT8-43
44-79
81-116
117-149		  4A:310-345
A:346-381
A:383-418
A:419-450
CALM1_RAT8-43
44-79
81-116
117-149		  4A:310-345
A:346-381
A:383-418
A:419-450
CALM2_RAT8-43
44-79
81-116
117-149		  4A:310-345
A:346-381
A:383-418
A:419-450
2EF_HAND_1PS00018 EF-hand calcium-binding domain.CALM3_RAT21-33
57-69
94-106
130-142		  4A:323-335
A:359-371
A:396-408
A:432-444
CALM1_RAT21-33
57-69
94-106
130-142		  4A:323-335
A:359-371
A:396-408
A:432-444
CALM2_RAT21-33
57-69
94-106
130-142		  4A:323-335
A:359-371
A:396-408
A:432-444
Biological Unit 1 (2, 48)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.CALM3_RAT8-43
44-79
81-116
117-149		  8A:310-345
A:346-381
A:383-418
A:419-450
CALM1_RAT8-43
44-79
81-116
117-149		  8A:310-345
A:346-381
A:383-418
A:419-450
CALM2_RAT8-43
44-79
81-116
117-149		  8A:310-345
A:346-381
A:383-418
A:419-450
2EF_HAND_1PS00018 EF-hand calcium-binding domain.CALM3_RAT21-33
57-69
94-106
130-142		  8A:323-335
A:359-371
A:396-408
A:432-444
CALM1_RAT21-33
57-69
94-106
130-142		  8A:323-335
A:359-371
A:396-408
A:432-444
CALM2_RAT21-33
57-69
94-106
130-142		  8A:323-335
A:359-371
A:396-408
A:432-444

(-) Exons   (0, 0)

(no "Exon" information available for 3EVU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:394
 aligned with CALM1_RAT | P0DP29 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:394
                                                                                                                                                                                                                                        1  4                                          5                                                                                                                                               
                                     -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -    |  | -         -         -         -         -|       14        24        34        44        54        64        74        84        94       104       114       124       134       144    
            CALM1_RAT     - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADQ------------------------------------------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh....eeeeeehhhheeeeeeeeeee.....eeeeeeeeeeee...........eeeeeeeeee........eeeeeeeeeee.......hhhhhhh..eeeeeeeeeee..eeeeeeeeeeeehhh.eeeeeeee.......hhhhhh....hhhhh..hhhhhhhhhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh..hhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh...hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------S--------------------------------M------------------------------------------------------------------------------------------I--------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: A:310-345           EF_HAND_2  PDB: A:346-381           -EF_HAND_2  PDB: A:383-418           EF_HAND_2  PDB: A:419-450        PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (6)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3evu A  39 SSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLgVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 450
                                    48        58        68        78        88        98       108       118       128       138       161       171       181       191       201       211       221|||    233       243       253       263       273       283       293       303|      316       326       336       346       356       366       376       386       396       406       416       426       436       446    
                                                                                                                                     146|                                                           222||                                                                          303|                                                                                                                                               
                                                                                                                                      160                                                            224-CRO                                                                        307                                                                                                                                               
                                                                                                                                                                                                      226                                                                                                                                                                                                                             


Chain A from PDB  Type:PROTEIN  Length:394
 aligned with CALM2_RAT | P0DP30 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:394
                                                                                                                                                                                                                                        1  4                                          5                                                                                                                                               
                                     -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -    |  | -         -         -         -         -|       14        24        34        44        54        64        74        84        94       104       114       124       134       144    
            CALM2_RAT     - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADQ------------------------------------------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh....eeeeeehhhheeeeeeeeeee.....eeeeeeeeeeee...........eeeeeeeeee........eeeeeeeeeee.......hhhhhhh..eeeeeeeeeee..eeeeeeeeeeeehhh.eeeeeeee.......hhhhhh....hhhhh..hhhhhhhhhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh..hhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh...hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------S--------------------------------M------------------------------------------------------------------------------------------I--------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: A:310-345           EF_HAND_2  PDB: A:346-381           -EF_HAND_2  PDB: A:383-418           EF_HAND_2  PDB: A:419-450        PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3evu A  39 SSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLgVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 450
                                    48        58        68        78        88        98       108       118       128       138       161       171       181       191       201       211       221|||    233       243       253       263       273       283       293       303|      316       326       336       346       356       366       376       386       396       406       416       426       436       446    
                                                                                                                                     146|                                                           222||                                                                          303|                                                                                                                                               
                                                                                                                                      160                                                            224-CRO                                                                        307                                                                                                                                               
                                                                                                                                                                                                      226                                                                                                                                                                                                                             


Chain A from PDB  Type:PROTEIN  Length:394
 aligned with CALM3_RAT | P0DP31 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:394
                                                                                                                                                                                                                                        1  4                                          5                                                                                                                                               
                                     -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -         -    |  | -         -         -         -         -|       14        24        34        44        54        64        74        84        94       104       114       124       134       144    
            CALM3_RAT     - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADQ------------------------------------------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh....eeeeeehhhheeeeeeeeeee.....eeeeeeeeeeee...........eeeeeeeeee........eeeeeeeeeee.......hhhhhhh..eeeeeeeeeee..eeeeeeeeeeeehhh.eeeeeeee.......hhhhhh....hhhhh..hhhhhhhhhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh..hhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh...hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------S--------------------------------M------------------------------------------------------------------------------------------I--------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_2  PDB: A:310-345           EF_HAND_2  PDB: A:346-381           -EF_HAND_2  PDB: A:383-418           EF_HAND_2  PDB: A:419-450        PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF_HAND_1    -----------------------EF_HAND_1    ------------------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (5)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3evu A  39 SSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLgVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 450
                                    48        58        68        78        88        98       108       118       128       138       161       171       181       191       201       211       221|||    233       243       253       263       273       283       293       303|      316       326       336       346       356       366       376       386       396       406       416       426       436       446    
                                                                                                                                     146|                                                           222||                                                                          303|                                                                                                                                               
                                                                                                                                      160                                                            224-CRO                                                                        307                                                                                                                                               
                                                                                                                                                                                                      226                                                                                                                                                                                                                             


Chain A from PDB  Type:PROTEIN  Length:394
 aligned with GFP_AEQVI | P42212 from UniProtKB/Swiss-Prot  Length:238

    Alignment length:396
                                                                                                                                                                                                                                                                                                                                                                       214                                                              
                                                                                                                                       1                                                                                                                                             145     146                       172   173                                     213 |     222   223            238                                 
                                     -         -         -         -         -         -         -         -         -         -       | 3        13        23        33        43        53        63        73        83        93       103       113       123       133       143 |     146       156       166     |   - |     181       191       201       211 | |   220 |     225       235  |      -         -         -      
            GFP_AEQVI     - -----------------------------------------------------------------------------------------------------------MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNY-------NSHNVYIMADKQKNGIKVNFKIRHNIE-----DGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNE-KRDHMVLLE-----FVTAAGITHGMDELYK---------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh....eeeeeehhhheeeeeeeeeee.....eeeeeeeeeeee...........eeeeeeeeee........eeeeeeeeeee.......hhhhhhh..eeeeeeeeeee..eeeeeeeeeeeehhh.eeeeeeee.......hhhhhh...--.hhhhh..hhhhhhhhhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh..hhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh...hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------S--------------------------------M------------------------------------------------------------------------------------------I--------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3evu A  39 SSRRKWNKTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL--gVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 450
                                    48        58        68        78        88        98       108       118       128       138       161       171       181       191       201       211       221|  ||  231       241       251       261       271       281       291       301 ||    314       324       334       344       354       364       374       384       394       404       414       424       434       444      
                                                                                                                                     146|                                                           222  ||                                                                          303|                                                                                                                                               
                                                                                                                                      160                                                              224-CRO                                                                        307                                                                                                                                               
                                                                                                                                                                                                        226                                                                                                                                                                                                                             


Chain A from PDB  Type:PROTEIN  Length:394
 aligned with MYLK_CHICK | P11799 from UniProtKB/Swiss-Prot  Length:1906

    Alignment length:854
                                   130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970    
           MYLK_CHICK   121 NSLKKYSLPSSAKTPGGRLSVPPVEHRPSIWGESPPKFATKPNRVVVREGQTGRFSCKITGRPQPQVTWTKGDIHLQQNERFNMFEKTGIQYLEIQNVQLADAGIYTCTVVNSAGKASVSAELTVQGPDKTDTHAQPLCMPPKPTTLATKAIENSDFKQATSNGIAKELKSTSTELMVETKDRLSAKKETFYTSREAKDGKQGQNQEANAVPLQESRGTKGPQVLQKTSSTITLQAVKAQPEPKAEPQTTFIRQAEDRKRTVQPLMTTTTQENPSLTGQVSPRSRETENRAGVRKSVKEEKREPLGIPPQFESRPQSLEASEGQEIKFKSKVSGKPKPDVEWFKEGVPIKTGEGIQIYEEDGTHCLWLKKACLGDSGSYSCAAFNPRGQTSTSWLLTVKRPKVEEVAPCFSSVLKGCTVSEGQDFVLQCYVGGVPVPEITWLLNEQPIQYAHSTFEAGVAKLTVQDALPEDDGIYTCLAENNAGRASCSAQVTVKEKKSSKKAEGTQAAKLNKTFAPIFLKGLTDLKVMDGSQVIMTVEVSANPCPEIIWLHNGKEIQETEDFHFEKKGNEYSLYIQEVFPEDTGKYTCEAWNELGETQTQATLTVQEPQDGIQPWFISKPRSVTAAAGQNVLISCAIAGDPFPTVHWFKDGQEITPGTGCEILQNEDIFTLILRNVQSRHAGQYEIQLRNQVGECSCQVSLMLRESSASRAEMLRDGRESASSGERRDGGNYGALTFGRTSGFKKSSSETRAAEEEQEDVRGVLKRRVETREHTEESLRQQEAEQLDFRDILGKKVSTKSFSEEDLKEIPAEQMDFRANLQRQVKPKTLSEEERKVHAPQQVDFRSVLAKKGT 974
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.-------------------...eeeeeehhhheeeeeeeeeee.....eeeeeeeeee---------------------------------------------------ee.........-----------------------------------------------..eeeeeeeeee........eeeeeeeeeee.-----------.....---------------------------------.hhhhhhh..ee-----------------------------------eeeeeeeee..eeeeeeee----------------eeeehhh-----------------------------.eeeeeeee...--....hhhhhh...-.----------hhhhh-------------------------------..hhhhhhhhhhhhh....-----------eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.----------------------------------......--------..........---.hhhhhhhhhhhhhhhh-.....eehhhhhhhhhhhh...------------.hhhhhhhhhhhhh......eehhhhhhhhhh..hhhhh---hhhhh------------------hhhhhhh.....eehhhhhh--------------hhhhhhh...hhhhhhhhhh-----------------------------------------------------------------------hhh......eehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y-------S--------------------------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------I---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3evu A  39 SSRRKWNKTGHAVRAIGRLSS-------------------LENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQN---------------------------------------------------TPIGDGPVLLP-----------------------------------------------DNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAG-----------ITLGM---------------------------------SKGEELFTGVVP-----------------------------------ILVELDGDVNGHKFSVSGE----------------GEGDATY-----------------------------GKLTLKFICTTG--KLPVPWPTLVTTL-g----------VQCFS-------------------------------RYPDHMKQHDFFKSAMPEG-----------YIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGID----------------------------------FKEDGN--------ILGHKLEYNT---LTEEQIAEFKEAFSLFD-KDGDGTITTKELGTVMRSLGQN------------PTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS---EEEIR------------------EAFRVFDKDGNGYISAAELR--------------HVMTNLGEKLTDEEVDEMIR-----------------------------------------------------------------------EADIDGDGQVNYEEFVQMMTA 450
                                    48        58|        -         -|       69        79        89        |-         -         -         -         -         -|      108|        -         -         -         -       111       121       131       141         - |   |   -         -         -       160       170|        -         -         -      |175       185    |    -         - |     | -         -         -       200        |- |     218   | |   -      |229|        -         -         -  |    238       248|        -  |    257       267       277       287         -         -         -    |  293       295       | - |     315       324       334       344|        -   |   352       362       372       382 |   | 389         -       391       401       | -         -  |    417       427 |       -         -         -         -         -         -         -   |   436       446    
                                               59                  60                                    98                                                  99       109                                             110                            141         142 146                               160        171                                 172               190              191   197                           198        209  |         222 |        226 230                             231               249         250                                  287                                288  293      294      303 307             323 |                  345          346                                   384 385 389                390                409            410                429                                                                     430                    
                                                                                                                                                                                                                                                                                                                                                                                                                                           210           224-CRO                                                                                                                                                                                           324
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3EVU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EVU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EVU)

(-) Gene Ontology  (76, 79)

Asymmetric Unit(hide GO term definitions)
Chain A   (CALM1_RAT | P0DP29)

Chain A   (MYLK_CHICK | P11799)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004687    myosin light chain kinase activity    Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0006939    smooth muscle contraction    A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain A   (CALM2_RAT | P0DP30)

Chain A   (CALM3_RAT | P0DP31)

Chain A   (GFP_AEQVI | P42212)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008218    bioluminescence    The production of light by certain enzyme-catalyzed reactions in cells.
    GO:0006091    generation of precursor metabolites and energy    The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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  CALM1_RAT | P0DP29
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  CALM2_RAT | P0DP30
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  CALM3_RAT | P0DP31
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  GFP_AEQVI | P42212
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  MYLK_CHICK | P11799
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  MYLK_CHICK | P11799
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CALM1_RAT | P0DP29: 1aji 1cm1 1cm4 1deg 1g4y 1k90 1k93 1lvc 1niw 1nkf 1qiv 1qiw 1qx5 1qx7 1sk6 1up5 2hqw 2mgu 2pq3 2ygg 3b32 3bxk 3bxl 3cln 3ek4 3ek7 3ek8 3ekh 3ekj 3evr 3evv 3ifk 3sg2 3sg3 3sg4 3sg5 3sg6 3sg7 3sjq 3wlc 3wld 4ehq 4g27 4g28 4i2y 4il1 4j9y 4j9z 4oy4 4qnh 4rjd
        CALM2_RAT | P0DP30: 1aji 1cm1 1cm4 1deg 1g4y 1k90 1k93 1lvc 1niw 1nkf 1qiv 1qiw 1qx5 1qx7 1sk6 1up5 2hqw 2mgu 2pq3 2ygg 3b32 3bxk 3bxl 3cln 3evr 3ifk 3sjq 4ehq 4g27 4g28 4i2y 4il1 4j9y 4j9z 4oy4 4qnh 4rjd
        CALM3_RAT | P0DP31: 1aji 1cm1 1cm4 1deg 1g4y 1k90 1k93 1lvc 1niw 1nkf 1qiv 1qiw 1qx5 1qx7 1sk6 1up5 2hqw 2mgu 2pq3 2ygg 3b32 3bxk 3bxl 3cln 3evr 3ifk 3sjq 4ehq 4g27 4g28 4i2y 4il1 4j9y 4j9z 4oy4 4qnh 4rjd
        GFP_AEQVI | P42212: 1b9c 1bfp 1c4f 1cv7 1ema 1emb 1emc 1eme 1emf 1emg 1emk 1eml 1emm 1f09 1f0b 1gfl 1h6r 1hcj 1huy 1jby 1jbz 1jc0 1jc1 1kp5 1kyp 1kyr 1kys 1myw 1q4a 1q4b 1q4c 1q4d 1q4e 1q73 1qxt 1qy3 1qyf 1qyo 1qyq 1rm9 1rmm 1rmo 1rmp 1rrx 1s6z 1w7s 1w7t 1w7u 1yfp 1yhg 1yhh 1yhi 1yj2 1yjf 1z1p 1z1q 2ah8 2aha 2awj 2awk 2awl 2awm 2b3p 2b3q 2due 2duf 2dug 2duh 2dui 2emd 2emn 2emo 2fwq 2fzu 2g16 2g2s 2g3d 2g5z 2g6e 2h6v 2h9w 2hcg 2hfc 2hgd 2hgy 2hjo 2hqz 2hrs 2jad 2o24 2o29 2o2b 2okw 2oky 2q57 2q6p 2qrf 2qt2 2qu1 2qz0 2wsn 2wso 2wur 2y0g 2ydz 2ye0 2ye1 2yfp 3cb9 3cbe 3cd1 3cd9 3dpw 3dpx 3dpz 3dq1 3dq2 3dq3 3dq4 3dq5 3dq6 3dq7 3dq8 3dq9 3dqa 3dqc 3dqd 3dqe 3dqf 3dqh 3dqi 3dqj 3dqk 3dql 3dqm 3dqn 3dqo 3dqu 3ed8 3ek4 3ek7 3ek8 3ekh 3ekj 3evp 3evr 3evv 3g9a 3gex 3gj1 3gj2 3i19 3k1k 3la1 3o77 3o78 3ogo 3osq 3osr 3p28 3sg2 3sg3 3sg4 3sg5 3sg6 3sg7 3sry 3ss0 3ssh 3ssk 3ssl 3ssp 3sst 3ssv 3ssy 3st0 3sv5 3svb 3svc 3svd 3sve 3u8p 3ufz 3ug0 3v3d 3vht 3w1c 3w1d 3wlc 3wld 3ztf 4anj 4ar7 4as8 4b5y 4bdu 4en1 4eul 4ges 4gf6 4h47 4h48 4ik1 4ik3 4ik4 4ik5 4ik8 4ik9 4j88 4j89 4j8a 4jfg 4jrb 4ka9 4kag 4kex 4kf5 4kw4 4kw8 4kw9 4l12 4l13 4l1i 4lqt 4lqu 4lw5 4n3d 4ndj 4ndk 4ogs 4orn 4p1q 4p7h 4pa0 4pfe 4u2v 4xbi 4xgy 4xl5 4xov 4xow 4xvp 4z4k 4z4m 4zf3 4zf4 4zf5 5aqb 5dpg 5dph 5dpi 5dpj 5dqb 5dqm 5drf 5drg 5dtx 5dty 5dtz 5du0 5ehu 5f9g 5fgu 5fji 5hbd 5hge 5hw9 5hzo 5j2o 5j3n 5ktg 5t3i
        MYLK_CHICK | P11799: 1cdl 1qs7 1qtx 1vrk 2o5g 3evv 3o77 3o78 4oy4

(-) Related Entries Specified in the PDB File

3evp 3evr 3evv