Chain A from PDB Type:PROTEIN Length:217
aligned with PAPD_ECOLX | P15319 from UniProtKB/Swiss-Prot Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PAPD_ECOLX 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7a1 A:1-124 Pilus chaperone PapD, N-domain d2uy7a2 A:125-217 PapD SCOP domains
CATH domains 2uy7A01 A:1-121 PapD-like 2uy7A02 A:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------PILI_CHAPERONE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 A 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain A from PDB Type:PROTEIN Length:217
aligned with Q1R2W9_ECOUT | Q1R2W9 from UniProtKB/TrEMBL Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
Q1R2W9_ECOUT 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7a1 A:1-124 Pilus chaperone PapD, N-domain d2uy7a2 A:125-217 PapD SCOP domains
CATH domains 2uy7A01 A:1-121 PapD-like 2uy7A02 A:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 A 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain B from PDB Type:PROTEIN Length:156
aligned with PAPA_ECOLX | P04127 from UniProtKB/Swiss-Prot Length:185
Alignment length:156
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
PAPA_ECOLX 30 QGKVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 185
SCOP domains d2uy7b1 B:8-163 Pap fimbrial major pilin protein PapA SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...............eee.............hhhhhhh......eeeeeeee.................eeeeee..ee..eeeeee......eeeeee.......................eeeeeeeeee.............eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2uy7 B 8 QGKVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 163
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157
Chain C from PDB Type:PROTEIN Length:217
aligned with PAPD_ECOLX | P15319 from UniProtKB/Swiss-Prot Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PAPD_ECOLX 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7c1 C:1-124 Pilus chaperone PapD, N-domain d2uy7c2 C:125-217 PapD SCOP domains
CATH domains 2uy7C01 C:1-121 PapD-like 2uy7C02 C:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------PILI_CHAPERONE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 C 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain C from PDB Type:PROTEIN Length:217
aligned with Q1R2W9_ECOUT | Q1R2W9 from UniProtKB/TrEMBL Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
Q1R2W9_ECOUT 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7c1 C:1-124 Pilus chaperone PapD, N-domain d2uy7c2 C:125-217 PapD SCOP domains
CATH domains 2uy7C01 C:1-121 PapD-like 2uy7C02 C:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 C 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain D from PDB Type:PROTEIN Length:154
aligned with PAPA_ECOLX | P04127 from UniProtKB/Swiss-Prot Length:185
Alignment length:156
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
PAPA_ECOLX 30 QGKVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 185
SCOP domains d2uy7d_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...............eee.............hhhhhhh......eeeeeeee..hhhhh..--......eeeeee..................eeeeee.......................eeeeeeeeee.............eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2uy7 D 8 QGKVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKG--GAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 163
17 27 37 47 57 67| | 77 87 97 107 117 127 137 147 157
68 71
Chain E from PDB Type:PROTEIN Length:217
aligned with PAPD_ECOLX | P15319 from UniProtKB/Swiss-Prot Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PAPD_ECOLX 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7e1 E:1-124 Pilus chaperone PapD, N-domain d2uy7e2 E:125-217 PapD SCOP domains
CATH domains 2uy7E01 E:1-121 PapD-like 2uy7E02 E:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------PILI_CHAPERONE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 E 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain E from PDB Type:PROTEIN Length:217
aligned with Q1R2W9_ECOUT | Q1R2W9 from UniProtKB/TrEMBL Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
Q1R2W9_ECOUT 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7e1 E:1-124 Pilus chaperone PapD, N-domain d2uy7e2 E:125-217 PapD SCOP domains
CATH domains 2uy7E01 E:1-121 PapD-like 2uy7E02 E:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeee...........eeee..........eeeeeeee.hhhhhh.....eeeeeeeeee........eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 E 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain F from PDB Type:PROTEIN Length:156
aligned with PAPA_ECOLX | P04127 from UniProtKB/Swiss-Prot Length:185
Alignment length:156
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
PAPA_ECOLX 30 QGKVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 185
SCOP domains d2uy7f_ F: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...............eee.............hhhhhhh......eeeeeeee..hhhhh..........eeeeee..ee..eeeeee......eeeeeee..ee..................eeeeeeeeee.............eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2uy7 F 8 QGKVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 163
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157
Chain G from PDB Type:PROTEIN Length:217
aligned with PAPD_ECOLX | P15319 from UniProtKB/Swiss-Prot Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
PAPD_ECOLX 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7g1 G:1-124 Pilus chaperone PapD, N-domain d2uy7g2 G:125-217 PapD SCOP domains
CATH domains 2uy7G01 G:1-121 PapD-like 2uy7G02 G:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains (1) Pili_assembly_N-2uy7G01 G:1-121 -------------------Pili_assembly_C-2uy7G05 G:141-204 ------------- Pfam domains (1)
Pfam domains (2) Pili_assembly_N-2uy7G02 G:1-121 -------------------Pili_assembly_C-2uy7G06 G:141-204 ------------- Pfam domains (2)
Pfam domains (3) Pili_assembly_N-2uy7G03 G:1-121 -------------------Pili_assembly_C-2uy7G07 G:141-204 ------------- Pfam domains (3)
Pfam domains (4) Pili_assembly_N-2uy7G04 G:1-121 -------------------Pili_assembly_C-2uy7G08 G:141-204 ------------- Pfam domains (4)
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeeee....ee....eeee..eeee....eeeeeeee.hhhhhh.......................eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------PILI_CHAPERONE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 G 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain G from PDB Type:PROTEIN Length:217
aligned with Q1R2W9_ECOUT | Q1R2W9 from UniProtKB/TrEMBL Length:239
Alignment length:217
31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231
Q1R2W9_ECOUT 22 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 238
SCOP domains d2uy7g1 G:1-124 Pilus chaperone PapD, N-domain d2uy7g2 G:125-217 PapD SCOP domains
CATH domains 2uy7G01 G:1-121 PapD-like 2uy7G02 G:122-213 [code=2.60.40.1070, no name defined] ---- CATH domains
Pfam domains (1) Pili_assembly_N-2uy7G01 G:1-121 -------------------Pili_assembly_C-2uy7G05 G:141-204 ------------- Pfam domains (1)
Pfam domains (2) Pili_assembly_N-2uy7G02 G:1-121 -------------------Pili_assembly_C-2uy7G06 G:141-204 ------------- Pfam domains (2)
Pfam domains (3) Pili_assembly_N-2uy7G03 G:1-121 -------------------Pili_assembly_C-2uy7G07 G:141-204 ------------- Pfam domains (3)
Pfam domains (4) Pili_assembly_N-2uy7G04 G:1-121 -------------------Pili_assembly_C-2uy7G08 G:141-204 ------------- Pfam domains (4)
Sec.struct. author .eee...eeeee....eeeeeeee......eeeeeeeee....ee....eeee..eeee....eeeeeeee.hhhhhh.......................eeeeeeeeeeeeeeehhhhh......hhhh.eeeee..eeeeee.....eeeeeee.hhhhhhhh....eee...eeeeee.......eeeee.......eeeeeee..eeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2uy7 G 1 AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE 217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
Chain H from PDB Type:PROTEIN Length:154
aligned with PAPA_ECOLX | P04127 from UniProtKB/Swiss-Prot Length:185
Alignment length:156
39 49 59 69 79 89 99 109 119 129 139 149 159 169 179
PAPA_ECOLX 30 QGKVTFNGTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 185
SCOP domains d2uy7h_ H: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) ---Fimbrial-2uy7H01 H:11-163 Pfam domains (1)
Pfam domains (2) ---Fimbrial-2uy7H02 H:11-163 Pfam domains (2)
Pfam domains (3) ---Fimbrial-2uy7H03 H:11-163 Pfam domains (3)
Pfam domains (4) ---Fimbrial-2uy7H04 H:11-163 Pfam domains (4)
Sec.struct. author ...............eee......eee....hhhhhh.......eeeeeeee...hhhhhh--......eeeeee..ee..eeeeee......eeeeeee..ee..................eeeeeeeeee.............eeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2uy7 H 8 QGKVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKG--GAKKGTVKLAFTGPIVNGHSDELDTNGGTGTAIVVQGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSSAVGAAVTEGAFSAVANFNLTYQ 163
17 27 37 47 57 67| | 77 87 97 107 117 127 137 147 157
68 71
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |