Chain A from PDB Type:PROTEIN Length:179
aligned with TNR1_ECOLI | P03012 from UniProtKB/Swiss-Prot Length:183
Alignment length:183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
TNR1_ECOLI 1 MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
SCOP domains d2gm4a2 A:1-140 gamma,delta resolvase, catalytic domain d2gm4a1 A:141-183 SCOP domains
CATH domains 2gm4A01 A:1-98 [code=3.40.50.1390, no name defined] 2gm4A02 A:99-137 2gm4A03 A:138-183 Homeodomain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeee.....hhhhhhhhhhhhh.hhh.eeeee..----.hhhhhhhhhhh....eeee........hhhhhhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -RECOMBINASES_3 PDB: A:3-137 UniProt: 2-137 ---------------------------------------------- PROSITE (1)
PROSITE (2) -----RECOMBINA-------------------------------------------RECOMBINASES_----------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2gm4 A 1 MALFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKAS----DRKGLDLLRMKVKEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDSIDTSSAMGRMVVTILSAVAQAERQRILQRTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
10 20 30 |- | 50 60 70 80 90 100 110 120 130 140 150 160 170 180
39 44
Chain B from PDB Type:PROTEIN Length:178
aligned with TNR1_ECOLI | P03012 from UniProtKB/Swiss-Prot Length:183
Alignment length:182
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
TNR1_ECOLI 2 RLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
SCOP domains d2gm4b2 B:2-140 gamma,delta resolvase, catalytic domain d2gm4b1 B:141-183 SCOP domains
CATH domains 2gm4B01 B:2-98 [code=3.40.50.1390, no name defined] 2gm4B02 B:99-137 2gm4B03 B:138-183 Homeodomain-like CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.....hhhhhhhhhhh...hhh.eeeee..----.hhhhhhhhh......eeee........hhhhhhhhhhhhhhhh.eeee....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh...hhhhhhhhh..hhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) RECOMBINASES_3 PDB: B:3-137 UniProt: 2-137 ---------------------------------------------- PROSITE (1)
PROSITE (2) ----RECOMBINA-------------------------------------------RECOMBINASES_----------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2gm4 B 2 ALFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKAS----DRKGLDLLRMKVKEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDSIDTSSAMGRMVVTILSAVAQAERQRILQRTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
11 21 31 | - | 51 61 71 81 91 101 111 121 131 141 151 161 171 181
39 44
Chain I from PDB Type:DNA Length:3
2gm4 I 20 AAA 22
Chain J from PDB Type:DNA Length:17
2gm4 J 3 AGTGTCCGATAATTTAT 19
12
Chain K from PDB Type:DNA Length:12
2gm4 K 23 TTATCGGACACT 34
32
Chain X from PDB Type:DNA Length:18
2gm4 X 2 CAGTGTCCGATAATTTAT 19
11
Chain Y from PDB Type:DNA Length:13
2gm4 Y 23 TTATCGGACACTG 35
32
Chain Z from PDB Type:DNA Length:3
2gm4 Z 20 AAA 22
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |