Chain A from PDB Type:PROTEIN Length:183
aligned with TNR1_ECOLI | P03012 from UniProtKB/Swiss-Prot Length:183
Alignment length:183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
TNR1_ECOLI 1 MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
SCOP domains d1gdta2 A:1-140 gamma,delta resolvase, catalytic domain d1gdta1 A:141-183 SCOP domains
CATH domains 1gdtA01 A:1-98 [code=3.40.50.1390, no name defined] 1gdtA02 A:99-140 1gdtA03 A:141-183 Homeodomain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeee...hhhhhhhhhhhhhh......eeeee........hhhhhhhhh.....eeee..hhh....hhhhhhhhhhhhh...eeeehhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhh....hhhhhhhh...hhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -RECOMBINASES_3 PDB: A:2-137 UniProt: 2-137 ---------------------------------------------- PROSITE (1)
PROSITE (2) -----RECOMBINA-------------------------------------------RECOMBINASES_----------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gdt A 1 MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
Chain B from PDB Type:PROTEIN Length:183
aligned with TNR1_ECOLI | P03012 from UniProtKB/Swiss-Prot Length:183
Alignment length:183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
TNR1_ECOLI 1 MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
SCOP domains d1gdtb2 B:1-140 gamma,delta resolvase, catalytic domain d1gdtb1 B:141-183 SCOP domains
CATH domains 1gdtB01 B:1-98 [code=3.40.50.1390, no name defined] 1gdtB02 B:99-138 1gdtB03 B:139-183 Homeodomain-like CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee......hhhhhhhhhhhh.....................hhhhhhhhh.....eeee..hhh....hhhhhhhhhhhhhh..eeee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhh....hhhhhhhh...hhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -RECOMBINASES_3 PDB: B:2-137 UniProt: 2-137 ---------------------------------------------- PROSITE (1)
PROSITE (2) -----RECOMBINA-------------------------------------------RECOMBINASES_----------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1gdt B 1 MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 183
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
Chain C from PDB Type:DNA Length:22
1gdt C 1 GCAGTGTCCGATAATTTATAAA 22
10 20
Chain D from PDB Type:DNA Length:13
1gdt D 23 TTATCGGACACTG 35
32
Chain E from PDB Type:DNA Length:21
1gdt E 2 CAGTGTCCGATAATTTATAAA 22
11 21
Chain F from PDB Type:DNA Length:13
1gdt F 23 TTATCGGACACTG 35
32
Legend: |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |