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(-) Description

Title :  CRYSTAL STRUCTURE OF E. COLI CARBAMOYL PHOSPHATE SYNTHETASE SMALL SUBUNIT MUTANT C248D COMPLEXED WITH URIDINE 5'-MONOPHOSPHATE
 
Authors :  J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
Date :  24 Apr 04  (Deposition) - 21 Sep 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Channeling, Pyrimidine Biosynthesis, Arginine Biosynthesis, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. B. Thoden, X. Huang, J. Kim, F. M. Raushel, H. M. Holden
Long-Range Allosteric Transitions In Carbamoyl Phosphate Synthetase.
Protein Sci. V. 13 2398 2004
PubMed-ID: 15322282  |  Reference-DOI: 10.1110/PS.04822704

(-) Compounds

Molecule 1 - CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN
    Chains: A, C, E, G
    EC Number: 6.3.5.5
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PET15
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: CARB, PYRA, B0033
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: CARBAMOYL-PHOSPHATE SYNTHETASE AMMONIA CHAIN
 
Molecule 2 - CARBAMOYL-PHOSPHATE SYNTHASE SMALL CHAIN
    Chains: B, D, F, H
    EC Number: 6.3.5.5
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: CARA, PYRA, B0032, Z0037, ECS0035
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: CARBAMOYL-PHOSPHATE SYNTHETASE GLUTAMINE CHAIN

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 86)

Asymmetric/Biological Unit (8, 86)
No.NameCountTypeFull Name
1ADP8Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL27Ligand/IonCHLORIDE ION
3K22Ligand/IonPOTASSIUM ION
4MN12Ligand/IonMANGANESE (II) ION
5NET4Ligand/IonTETRAETHYLAMMONIUM ION
6ORN4Ligand/IonL-ORNITHINE
7PO45Ligand/IonPHOSPHATE ION
8U4Ligand/IonURIDINE-5'-MONOPHOSPHATE

(-) Sites  (86, 86)

Asymmetric Unit (86, 86)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:299 , ASN A:301 , PO4 A:1078 , ADP A:1087 , HOH A:1191BINDING SITE FOR RESIDUE MN A 1074
02AC2SOFTWAREGLN A:285 , GLU A:299 , PO4 A:1078 , ADP A:1087 , HOH A:1605BINDING SITE FOR RESIDUE MN A 1075
03AC3SOFTWAREGLU A:215 , ASN A:236 , ASP A:238 , ALA A:239 , ILE A:242 , SER A:247BINDING SITE FOR RESIDUE K A 1076
04AC4SOFTWAREALA A:126 , GLU A:127 , GLU A:299 , MET A:300 , ASN A:301 , HOH A:1193 , HOH A:1607BINDING SITE FOR RESIDUE K A 1077
05AC5SOFTWAREMET A:174 , GLY A:175 , HIS A:243 , GLN A:285 , GLU A:299 , ASN A:301 , ARG A:303 , ARG A:306 , MN A:1074 , MN A:1075 , ADP A:1087 , HOH A:1130 , HOH A:1305 , HOH A:1306BINDING SITE FOR RESIDUE PO4 A 1078
06AC6SOFTWAREGLN A:829 , GLU A:841 , ADP A:1088 , HOH A:1608 , HOH A:1903BINDING SITE FOR RESIDUE MN A 1079
07AC7SOFTWAREGLU A:761 , HIS A:781 , GLU A:783 , GLN A:784 , VAL A:787 , SER A:792BINDING SITE FOR RESIDUE K A 1080
08AC8SOFTWAREGLN A:93 , MET A:174BINDING SITE FOR RESIDUE CL A 1081
09AC9SOFTWARETHR A:143 , ALA A:144 , HOH A:1202 , HOH A:1203 , HOH A:1204BINDING SITE FOR RESIDUE K A 1082
10BC1SOFTWARETRP A:71 , HOH A:1622BINDING SITE FOR RESIDUE CL A 1083
11BC2SOFTWAREASN A:289 , ASN A:292 , ARG A:294BINDING SITE FOR RESIDUE CL A 1084
12BC3SOFTWAREALA A:370 , ASN A:371 , PHE A:900 , PRO A:901 , GLY A:902BINDING SITE FOR RESIDUE CL A 1085
13BC4SOFTWARELYS A:475 , ASN A:485 , PHE A:488BINDING SITE FOR RESIDUE CL A 1086
14BC5SOFTWAREHOH A:1456 , HOH A:1457 , HIS B:16 , ASP B:112 , HOH B:3394 , HOH B:3605BINDING SITE FOR RESIDUE K B 383
15BC6SOFTWAREGLU C:299 , ASN C:301 , MN C:1075 , PO4 C:1078 , ADP C:1089 , HOH C:1191BINDING SITE FOR RESIDUE MN C 1074
16BC7SOFTWAREGLN C:285 , GLU C:299 , MN C:1074 , PO4 C:1078 , ADP C:1089 , HOH C:1587BINDING SITE FOR RESIDUE MN C 1075
17BC8SOFTWAREGLU C:215 , ASN C:236 , ASP C:238 , ALA C:239 , ILE C:242 , SER C:247BINDING SITE FOR RESIDUE K C 1076
18BC9SOFTWAREALA C:126 , GLU C:127 , GLU C:299 , MET C:300 , ASN C:301 , HOH C:1193BINDING SITE FOR RESIDUE K C 1077
19CC1SOFTWAREMET C:174 , GLY C:175 , HIS C:243 , GLN C:285 , GLU C:299 , ASN C:301 , ARG C:303 , ARG C:306 , MN C:1074 , MN C:1075 , ADP C:1089 , HOH C:1191 , HOH C:1301BINDING SITE FOR RESIDUE PO4 C 1078
20CC2SOFTWAREGLN C:829 , GLU C:841 , ADP C:1090 , HOH C:1589 , HOH C:1590BINDING SITE FOR RESIDUE MN C 1079
21CC3SOFTWAREGLU C:761 , HIS C:781 , GLU C:783 , GLN C:784 , VAL C:787 , SER C:792BINDING SITE FOR RESIDUE K C 1080
22CC4SOFTWARETHR C:173 , MET C:174 , HOH C:1127BINDING SITE FOR RESIDUE CL C 1081
23CC5SOFTWARETHR C:143 , ALA C:144 , HOH C:1201 , HOH C:1202BINDING SITE FOR RESIDUE K C 1082
24CC6SOFTWARETRP C:71BINDING SITE FOR RESIDUE CL C 1083
25CC7SOFTWAREASN C:289 , ASN C:292 , ARG C:294BINDING SITE FOR RESIDUE CL C 1084
26CC8SOFTWAREALA C:370 , ASN C:371 , PHE C:900 , PRO C:901 , GLY C:902BINDING SITE FOR RESIDUE CL C 1085
27CC9SOFTWARELYS C:475 , ASN C:485 , HOH C:1607BINDING SITE FOR RESIDUE CL C 1086
28DC1SOFTWAREHOH C:1451 , HIS D:16 , ASP D:112 , HOH D:2331 , HOH D:2536BINDING SITE FOR RESIDUE K D 383
29DC2SOFTWAREGLU C:549 , PHE D:15 , ASP D:114 , HOH D:2330BINDING SITE FOR RESIDUE CL D 384
30DC3SOFTWAREPHE C:578 , ARG C:845 , ALA C:847 , ARG C:848BINDING SITE FOR RESIDUE CL C 1087
31DC4SOFTWAREGLU C:560 , ASP C:592BINDING SITE FOR RESIDUE PO4 C 1088
32DC5SOFTWAREGLU E:299 , ASN E:301 , PO4 E:1078 , ADP E:1089 , HOH E:1193BINDING SITE FOR RESIDUE MN E 1074
33DC6SOFTWAREGLN E:285 , GLU E:299 , PO4 E:1078 , ADP E:1089 , HOH E:1597BINDING SITE FOR RESIDUE MN E 1075
34DC7SOFTWAREGLU E:215 , ASN E:236 , ASP E:238 , ALA E:239 , ILE E:242 , SER E:247BINDING SITE FOR RESIDUE K E 1076
35DC8SOFTWAREALA E:126 , GLU E:127 , GLU E:299 , MET E:300 , ASN E:301 , HOH E:1193 , HOH E:1195BINDING SITE FOR RESIDUE K E 1077
36DC9SOFTWAREMET E:174 , GLY E:175 , HIS E:243 , GLN E:285 , GLU E:299 , ASN E:301 , ARG E:303 , ARG E:306 , MN E:1074 , MN E:1075 , ADP E:1089 , HOH E:1129 , HOH E:1303BINDING SITE FOR RESIDUE PO4 E 1078
37EC1SOFTWAREGLN E:829 , GLU E:841 , ADP E:1090 , HOH E:1601 , HOH E:1602BINDING SITE FOR RESIDUE MN E 1079
38EC2SOFTWAREGLU E:761 , HIS E:781 , GLU E:783 , GLN E:784 , VAL E:787 , SER E:792BINDING SITE FOR RESIDUE K E 1080
39EC3SOFTWAREASP E:84 , GLY E:112 , THR E:114 , HOH E:1095 , HOH E:1605BINDING SITE FOR RESIDUE K E 1081
40EC4SOFTWARETHR E:173 , MET E:174BINDING SITE FOR RESIDUE CL E 1082
41EC5SOFTWARETHR E:143 , ALA E:144 , HOH E:1202 , HOH E:1203BINDING SITE FOR RESIDUE K E 1083
42EC6SOFTWARETRP E:71BINDING SITE FOR RESIDUE CL E 1084
43EC7SOFTWAREASN E:289 , ASN E:292 , ARG E:294BINDING SITE FOR RESIDUE CL E 1085
44EC8SOFTWAREALA E:370 , ASN E:371 , PHE E:900 , PRO E:901 , GLY E:902BINDING SITE FOR RESIDUE CL E 1086
45EC9SOFTWARELYS E:475 , ASN E:485 , HOH E:1614BINDING SITE FOR RESIDUE CL E 1087
46FC1SOFTWAREHOH E:1447 , HIS F:16 , ASP F:112 , HOH F:1308BINDING SITE FOR RESIDUE K F 383
47FC2SOFTWAREGLU E:549 , HOH E:1447 , PHE F:15 , ASP F:114 , HOH F:1307BINDING SITE FOR RESIDUE CL F 384
48FC3SOFTWAREALA E:847 , ARG E:848BINDING SITE FOR RESIDUE CL E 1088
49FC4SOFTWAREMET G:174 , GLU G:299 , ASN G:301 , MN G:1075 , PO4 G:1078 , ADP G:1089 , HOH G:1190BINDING SITE FOR RESIDUE MN G 1074
50FC5SOFTWAREGLN G:285 , GLU G:299 , MN G:1074 , PO4 G:1078 , ADP G:1089 , HOH G:1549BINDING SITE FOR RESIDUE MN G 1075
51FC6SOFTWAREGLU G:215 , ASN G:236 , ASP G:238 , ALA G:239 , ILE G:242 , SER G:247BINDING SITE FOR RESIDUE K G 1076
52FC7SOFTWAREALA G:126 , GLU G:127 , GLU G:299 , MET G:300 , ASN G:301 , HOH G:1190 , HOH G:1191BINDING SITE FOR RESIDUE K G 1077
53FC8SOFTWAREMET G:174 , GLY G:175 , HIS G:243 , GLN G:285 , GLU G:299 , ASN G:301 , ARG G:303 , ARG G:306 , MN G:1074 , MN G:1075 , ADP G:1089 , HOH G:1130 , HOH G:1289 , HOH G:1549BINDING SITE FOR RESIDUE PO4 G 1078
54FC9SOFTWAREGLN G:829 , GLU G:841 , ADP G:1090 , HOH G:1550 , HOH G:1551BINDING SITE FOR RESIDUE MN G 1079
55GC1SOFTWAREGLU G:761 , HIS G:781 , GLU G:783 , GLN G:784 , VAL G:787 , SER G:792BINDING SITE FOR RESIDUE K G 1080
56GC2SOFTWAREASP G:84 , GLY G:112 , THR G:114BINDING SITE FOR RESIDUE K G 1081
57GC3SOFTWAREGLN G:93 , THR G:173 , MET G:174 , NET G:1092 , HOH G:1122BINDING SITE FOR RESIDUE CL G 1082
58GC4SOFTWARETHR G:143 , ALA G:144 , HOH G:1198 , HOH G:1199BINDING SITE FOR RESIDUE K G 1083
59GC5SOFTWARETRP G:71BINDING SITE FOR RESIDUE CL G 1084
60GC6SOFTWAREASN G:289 , ASN G:292 , ARG G:294BINDING SITE FOR RESIDUE CL G 1085
61GC7SOFTWAREASN G:371 , PHE G:900 , PRO G:901 , GLY G:902 , HOH G:1246BINDING SITE FOR RESIDUE CL G 1086
62GC8SOFTWARELYS G:475 , ASN G:485 , PHE G:488 , HOH G:1419BINDING SITE FOR RESIDUE CL G 1087
63GC9SOFTWAREHOH G:1422 , HOH G:1423 , HIS H:16 , ASP H:112BINDING SITE FOR RESIDUE K H 383
64HC1SOFTWAREPHE H:15 , ASP H:114BINDING SITE FOR RESIDUE CL H 384
65HC2SOFTWAREARG G:845 , ALA G:847 , ARG G:848BINDING SITE FOR RESIDUE CL G 1088
66HC3SOFTWARETRP H:170 , THR H:171 , GLN H:172BINDING SITE FOR RESIDUE CL H 385
67HC4SOFTWAREARG A:129 , ILE A:167 , ARG A:169 , THR A:173 , MET A:174 , GLY A:175 , GLY A:176 , ASP A:207 , GLU A:208 , LEU A:210 , ILE A:211 , GLU A:215 , MET A:240 , GLY A:241 , ILE A:242 , HIS A:243 , THR A:244 , GLN A:285 , ILE A:298 , GLU A:299 , THR A:376 , MN A:1074 , MN A:1075 , PO4 A:1078 , HOH A:1191 , HOH A:1231 , HOH A:1244 , HOH A:1605BINDING SITE FOR RESIDUE ADP A 1087
68HC5SOFTWAREPRO A:690 , ARG A:715 , MET A:725 , HIS A:754 , PHE A:755 , LEU A:756 , GLU A:761 , ALA A:785 , GLY A:786 , VAL A:787 , HIS A:788 , SER A:789 , GLN A:829 , GLU A:841 , PRO A:909 , MN A:1079 , HOH A:1499 , HOH A:1522 , HOH A:1526 , HOH A:1608 , HOH A:1609 , HOH A:1903BINDING SITE FOR RESIDUE ADP A 1088
69HC6SOFTWAREGLU A:783 , ASP A:791 , ALA A:793 , GLU A:892 , LEU A:907 , TYR A:1040 , ASP A:1041 , THR A:1042 , HOH A:1538 , HOH A:1564BINDING SITE FOR RESIDUE ORN A 1089
70HC7SOFTWARETHR A:94 , ASN A:97 , ASN A:936BINDING SITE FOR RESIDUE NET A 1090
71HC8SOFTWARESER A:948 , VAL A:949 , LYS A:954 , THR A:974 , GLY A:976 , THR A:977 , LYS A:993 , ASN A:1015 , THR A:1016 , THR A:1017 , ASP A:1025 , SER A:1026 , ILE A:1029 , HOH A:1590BINDING SITE FOR RESIDUE U A 1091
72HC9SOFTWAREARG C:129 , ILE C:167 , ARG C:169 , THR C:173 , MET C:174 , GLY C:175 , GLY C:176 , GLU C:208 , SER C:209 , LEU C:210 , ILE C:211 , GLU C:215 , MET C:240 , GLY C:241 , ILE C:242 , HIS C:243 , THR C:244 , GLN C:285 , ILE C:298 , GLU C:299 , THR C:376 , MN C:1074 , MN C:1075 , PO4 C:1078 , HOH C:1191 , HOH C:1229 , HOH C:1244 , HOH C:1587BINDING SITE FOR RESIDUE ADP C 1089
73IC1SOFTWAREARG C:715 , MET C:725 , HIS C:754 , PHE C:755 , LEU C:756 , GLU C:761 , ALA C:785 , GLY C:786 , VAL C:787 , HIS C:788 , SER C:789 , GLN C:829 , GLU C:841 , MN C:1079 , HOH C:1515 , HOH C:1516 , HOH C:1589 , HOH C:1590BINDING SITE FOR RESIDUE ADP C 1090
74IC2SOFTWAREGLU C:783 , ASP C:791 , GLU C:892 , LEU C:907 , TYR C:1040 , ASP C:1041 , THR C:1042 , HOH C:1530 , HOH C:1548BINDING SITE FOR RESIDUE ORN C 1091
75IC3SOFTWARETHR C:94 , ASN C:97BINDING SITE FOR RESIDUE NET C 1092
76IC4SOFTWARESER C:948 , VAL C:949 , LYS C:954 , THR C:974 , GLY C:976 , THR C:977 , LYS C:993 , ASN C:1015 , THR C:1016 , THR C:1017 , ALA C:1022 , SER C:1026 , ILE C:1029 , HOH C:1576 , HOH C:1846BINDING SITE FOR RESIDUE U C 1093
77IC5SOFTWAREARG E:129 , ILE E:167 , ARG E:169 , MET E:174 , GLY E:175 , GLY E:176 , GLU E:208 , LEU E:210 , ILE E:211 , GLU E:215 , MET E:240 , GLY E:241 , ILE E:242 , HIS E:243 , THR E:244 , GLN E:285 , ILE E:298 , GLU E:299 , THR E:376 , MN E:1074 , MN E:1075 , PO4 E:1078 , HOH E:1193 , HOH E:1227 , HOH E:1244 , HOH E:1597BINDING SITE FOR RESIDUE ADP E 1089
78IC6SOFTWAREPRO E:690 , ARG E:715 , MET E:725 , HIS E:754 , PHE E:755 , LEU E:756 , GLU E:761 , ALA E:785 , GLY E:786 , VAL E:787 , HIS E:788 , SER E:789 , GLN E:829 , GLU E:841 , MN E:1079 , HOH E:1520 , HOH E:1521 , HOH E:1525 , HOH E:1598 , HOH E:1599 , HOH E:1600 , HOH E:1602BINDING SITE FOR RESIDUE ADP E 1090
79IC7SOFTWAREGLU E:783 , ASP E:791 , GLU E:892 , LEU E:907 , TYR E:1040 , ASP E:1041 , THR E:1042 , HOH E:1537 , HOH E:1560 , HOH E:1570BINDING SITE FOR RESIDUE ORN E 1091
80IC8SOFTWAREGLN E:22 , GLN E:93 , THR E:94BINDING SITE FOR RESIDUE NET E 1092
81IC9SOFTWARESER E:948 , VAL E:949 , ARG E:950 , LYS E:954 , THR E:974 , GLY E:976 , THR E:977 , LYS E:993 , ASN E:1015 , THR E:1016 , THR E:1017 , ASP E:1025 , SER E:1026 , ILE E:1029 , HOH E:1585 , HOH E:1839 , HOH E:1847BINDING SITE FOR RESIDUE U E 1093
82JC1SOFTWAREARG G:129 , ILE G:167 , ARG G:169 , THR G:173 , MET G:174 , GLY G:175 , GLY G:176 , GLU G:208 , LEU G:210 , ILE G:211 , GLU G:215 , MET G:240 , GLY G:241 , ILE G:242 , HIS G:243 , THR G:244 , GLN G:285 , ILE G:298 , GLU G:299 , THR G:376 , MN G:1074 , MN G:1075 , PO4 G:1078 , HOH G:1222 , HOH G:1237 , HOH G:1548 , HOH G:1549BINDING SITE FOR RESIDUE ADP G 1089
83JC2SOFTWAREARG G:715 , HIS G:754 , PHE G:755 , LEU G:756 , GLU G:761 , ALA G:785 , GLY G:786 , VAL G:787 , HIS G:788 , SER G:789 , GLN G:829 , GLU G:841 , MN G:1079 , HOH G:1474 , HOH G:1478 , HOH G:1550 , HOH G:1551BINDING SITE FOR RESIDUE ADP G 1090
84JC3SOFTWAREGLU G:783 , ASP G:791 , GLU G:892 , LEU G:907 , TYR G:1040 , ASP G:1041 , THR G:1042 , HOH G:1488 , HOH G:1511 , HOH G:1554BINDING SITE FOR RESIDUE ORN G 1091
85JC4SOFTWAREGLN G:22 , THR G:94 , ASN G:97 , CL G:1082BINDING SITE FOR RESIDUE NET G 1092
86JC5SOFTWARESER G:948 , VAL G:949 , LYS G:954 , THR G:974 , GLY G:976 , THR G:977 , LYS G:993 , ASN G:1015 , THR G:1016 , THR G:1017 , ALA G:1022 , ASP G:1025 , SER G:1026 , ILE G:1029 , HOH G:1537BINDING SITE FOR RESIDUE U G 1093

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1T36)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric/Biological Unit
No.Residues
1Phe A:164 -Pro A:165
2Ala A:251 -Pro A:252
3Tyr A:710 -Pro A:711
4Leu A:796 -Pro A:797
5Arg A:998 -Pro A:999
6Ser B:357 -Pro B:358
7Phe C:164 -Pro C:165
8Ala C:251 -Pro C:252
9Tyr C:710 -Pro C:711
10Leu C:796 -Pro C:797
11Arg C:998 -Pro C:999
12Ser D:357 -Pro D:358
13Phe E:164 -Pro E:165
14Ala E:251 -Pro E:252
15Tyr E:710 -Pro E:711
16Leu E:796 -Pro E:797
17Arg E:998 -Pro E:999
18Ser F:357 -Pro F:358
19Phe G:164 -Pro G:165
20Ala G:251 -Pro G:252
21Tyr G:710 -Pro G:711
22Leu G:796 -Pro G:797
23Arg G:998 -Pro G:999
24Ser H:357 -Pro H:358

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1T36)

(-) PROSITE Motifs  (2, 16)

Asymmetric/Biological Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 		  8A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 		  8A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846

(-) Exons   (0, 0)

(no "Exon" information available for 1T36)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1t36a3 A:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1t36a5 A:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1t36a1 A:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1t36a4 A:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1t36a6 A:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1t36a2 A:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1t36A01 A:1-116  [code=3.40.50.20, no name defined]                                                                 1t36A02                 1t36A03 A:141-210 ATP-grasp fold, A domain                            1t36A02 A:117-140,A:211-403 ATP-grasp fold, B domain                                                                                                                                             1t36A04 A:404-522 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                    1t36A05 A:523-665  [code=3.40.50.20, no name defined]                                                                                          -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1t36A07 A:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeee......eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhh...hhhhh...................eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eee..-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeeeeee...hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhhh.eeeehhhhhhhhhhh....ee.........hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 A    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36b1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36b2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36B01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36B02 B:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh...eeeee...hhhhhhhhhh....eeeee...hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhh....eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain B from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36b1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36b2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36B01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36B02 B:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh...eeeee...hhhhhhhhhh....eeeee...hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhh....eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain C from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1t36c3 C:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1t36c5 C:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1t36c1 C:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1t36c4 C:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1t36c6 C:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1t36c2 C:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1t36C01 C:1-116  [code=3.40.50.20, no name defined]                                                                 1t36C02                 1t36C03 C:141-210 ATP-grasp fold, A domain                            1t36C02 C:117-140,C:211-403 ATP-grasp fold, B domain                                                                                                                                             1t36C04 C:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1t36C05 C:554-663  [code=3.40.50.20, no name defined]                                                         1t36C06                1t36C07 C:687-756 ATP-grasp fo       ld, A domain                     1t36C06 C:664-686,C:757-936 ATP-grasp fold, B domain                                                                                                                                1t36C08 C:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee............eeeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeeeeee...hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhh.....ee..hhhhh..hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 C    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   


Chain D from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36d1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36d2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36D01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36D02 D:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhh....eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain D from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36d1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36d2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36D01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36D02 D:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhh....eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain E from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1t36e3 E:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1t36e5 E:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1t36e1 E:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1t36e4 E:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1t36e6 E:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1t36e2 E:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1t36E01 E:1-116  [code=3.40.50.20, no name defined]                                                                 1t36E02                 1t36E03 E:141-210 ATP-grasp fold, A domain                            1t36E02 E:117-140,E:211-403 ATP-grasp fold, B domain                                                                                                                                             1t36E04 E:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1t36E05 E:554-663  [code=3.40.50.20, no name defined]                                                         1t36E06                1t36E07 E:687-756 ATP-grasp fo       ld, A domain                     1t36E06 E:664-686,E:757-936 ATP-grasp fold, B domain                                                                                                                                1t36E08 E:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhh...........................eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhh....eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeeeeee...hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.......hhhhhhhhhhhh..eeeeehhhhhhhhhh....eee.hhhhh..hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 E    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36f1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36f2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36F01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36F02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh......hhhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee..........hhhhhhhhhhhhh...eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain F from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36f1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36f2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36F01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36F02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh......hhhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee..........hhhhhhhhhhhhh...eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain G from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1t36g3 G:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1t36g5 G:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1t36g1 G:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1t36g4 G:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1t36g6 G:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1t36g2 G:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1t36G01 G:1-116  [code=3.40.50.20, no name defined]                                                                 1t36G02                 1t36G03 G:141-210 ATP-grasp fold, A domain                            1t36G02 G:117-140,G:211-403 ATP-grasp fold, B domain                                                                                                                                             1t36G04 G:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1t36G05 G:554-663  [code=3.40.50.20, no name defined]                                                         1t36G06                1t36G07 G:687-756 ATP-grasp fo       ld, A domain                     1t36G06 G:664-686,G:757-936 ATP-grasp fold, B domain                                                                                                                                1t36G08 G:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhh.................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhhh.eeeee.........hhhhh.eee....hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeeee...eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhh..eeeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh.......eeeeee.hhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhh....eee.hhhhh..hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhh........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 G    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   


Chain H from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36h1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36h2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36H01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36H02 H:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhh........hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee.....eeeeeeeeeeee........eeeeeee.....eeeeee....eeee.........hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         


Chain H from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1t36h1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1t36h2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1t36H01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1t36H02 H:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhh........hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee.....eeeeeeeeeeee........eeeeeee.....eeeeee....eeee.........hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1t36 H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 32)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Fold: Flavodoxin-like (1057)
(-)
Fold: Methylglyoxal synthase-like (31)
(-)
Fold: PreATP-grasp domain (131)
(-)
Fold: The swivelling beta/beta/alpha domain (136)

(-) CATH Domains  (7, 38)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Topology: D-amino Acid Aminotransferase; Chain A, domain 1 (175)
(-)
Homologous Superfamily: ATP-grasp fold, B domain (118)
(-)
Escherichia coli. Organism_taxid: 562. (17)
1a1t36C06C:664-686,C:757-936
1b1t36E06E:664-686,E:757-936
1c1t36G06G:664-686,G:757-936
1d1t36A02A:117-140,A:211-403
1e1t36C02C:117-140,C:211-403
1f1t36E02E:117-140,E:211-403
1g1t36G02G:117-140,G:211-403
(-)
Topology: Dna Ligase; domain 1 (375)
(-)
Homologous Superfamily: ATP-grasp fold, A domain (109)
(-)
Escherichia coli. Organism_taxid: 562. (15)
2a1t36A03A:141-210
2b1t36C03C:141-210
2c1t36E03E:141-210
2d1t36G03G:141-210
2e1t36C07C:687-756
2f1t36E07E:687-756
2g1t36G07G:687-756
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Architecture: 3-Layer(bba) Sandwich (528)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1T36)

(-) Gene Ontology  (21, 43)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,C,E,G   (CARB_ECOLI | P00968)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004087    carbamoyl-phosphate synthase (ammonia) activity    Catalysis of the reaction: 2 ATP + CO(2) + H(2)O + NH(4)(+) = 2 ADP + carbamoyl phosphate + 5 H(+) + phosphate.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0019856    pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (CARA_ECO57 | P0A6F2)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

Chain B,D,F,H   (CARA_ECOLI | P0A6F1)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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    Arg A:998 - Pro A:999   [ RasMol ]  
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  1t36
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  CARA_ECO57 | P0A6F2
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  CARA_ECOLI | P0A6F1
    Comparative Protein Structure Models: ModBase
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  CARB_ECOLI | P00968
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  6.3.5.5
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  CARA_ECO57 | P0A6F2
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  CARB_ECOLI | P00968
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CARA_ECO57 | P0A6F2: 1a9x 1c30 1c3o 1cs0 1jdb 1kee 1m6v
        CARA_ECOLI | P0A6F1: 1a9x 1bxr 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1m6v
        CARB_ECOLI | P00968: 1a9x 1bxr 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1m6v

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1T36)