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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT MUTANT C269S WITH BOUND GLUTAMINE
 
Authors :  J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
Date :  28 Jul 99  (Deposition) - 10 Dec 99  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Amidotransferase, Michaelis Complex, Atp-Grasp, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
The Small Subunit Of Carbamoyl Phosphate Synthetase: Snapshots Along The Reaction Pathway.
Biochemistry V. 38 16158 1999
PubMed-ID: 10587438  |  Reference-DOI: 10.1021/BI991741J

(-) Compounds

Molecule 1
    ChainsA, C, E, G
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemBACTERIA
    Expression System CommonEUBACTERIA
    Expression System Taxid2
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562
 
Molecule 2
    ChainsB, D, F, H
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemBACTERIA
    Expression System CommonEUBACTERIA
    Expression System Taxid2
    MutationYES
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 89)

Asymmetric/Biological Unit (8, 89)
No.NameCountTypeFull Name
1ADP8Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL16Ligand/IonCHLORIDE ION
3GLN8Mod. Amino AcidGLUTAMINE
4K32Ligand/IonPOTASSIUM ION
5MN12Ligand/IonMANGANESE (II) ION
6NET4Ligand/IonTETRAETHYLAMMONIUM ION
7ORN4Ligand/IonL-ORNITHINE
8PO45Ligand/IonPHOSPHATE ION

(-) Sites  (89, 89)

Asymmetric Unit (89, 89)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:299 , ASN A:301 , ADP A:4000 , MN A:4002 , PO4 A:4006 , HOH A:4092BINDING SITE FOR RESIDUE MN A 4001
02AC2SOFTWAREGLN A:285 , GLU A:299 , ADP A:4000 , MN A:4001 , PO4 A:4006 , K A:4020 , HOH A:4089BINDING SITE FOR RESIDUE MN A 4002
03AC3SOFTWAREGLU A:215 , ASN A:236 , ASP A:238 , ALA A:239 , ILE A:242 , SER A:247BINDING SITE FOR RESIDUE K A 4003
04AC4SOFTWAREALA A:126 , GLU A:127 , GLU A:299 , MET A:300 , ASN A:301 , HOH A:4092 , HOH A:4093BINDING SITE FOR RESIDUE K A 4004
05AC5SOFTWAREGLN A:829 , GLU A:841 , ADP A:4007 , HOH A:4557BINDING SITE FOR RESIDUE MN A 4008
06AC6SOFTWAREGLU A:841 , ASN A:843 , ADP A:4007BINDING SITE FOR RESIDUE K A 4009
07AC7SOFTWAREGLU A:761 , HIS A:781 , GLU A:783 , GLN A:784 , VAL A:787 , SER A:792BINDING SITE FOR RESIDUE K A 4010
08AC8SOFTWAREGLN A:93 , THR A:173 , MET A:174 , HOH A:4028 , HOH A:4031BINDING SITE FOR RESIDUE CL A 4015
09AC9SOFTWAREASN A:289 , ASN A:292 , ARG A:294BINDING SITE FOR RESIDUE CL A 4016
10BC1SOFTWAREASN A:371 , PHE A:900 , PRO A:901 , GLY A:902BINDING SITE FOR RESIDUE CL A 4017
11BC2SOFTWAREASP B:114 , HOH B:4081BINDING SITE FOR RESIDUE CL B 4018
12BC3SOFTWAREHIS B:16 , ASP B:112 , HOH B:4082 , HOH B:4083BINDING SITE FOR RESIDUE K B 4019
13BC4SOFTWAREGLU A:217 , THR A:244 , ASN A:283 , GLN A:285 , MN A:4002 , PO4 A:4006 , HOH A:4098BINDING SITE FOR RESIDUE K A 4020
14BC5SOFTWAREASP A:84 , GLY A:112 , THR A:114 , HOH A:4111 , HOH A:4113BINDING SITE FOR RESIDUE K A 4021
15BC6SOFTWARETHR A:143 , ALA A:144 , HOH A:4203BINDING SITE FOR RESIDUE K A 4022
16BC7SOFTWAREGLU C:299 , ASN C:301 , ADP C:4023 , K C:4027 , PO4 C:4028 , HOH C:4113BINDING SITE FOR RESIDUE MN C 4024
17BC8SOFTWAREGLN C:285 , GLU C:299 , ADP C:4023 , PO4 C:4028 , K C:4042 , HOH C:4110BINDING SITE FOR RESIDUE MN C 4025
18BC9SOFTWAREGLU C:215 , ASN C:236 , ASP C:238 , ALA C:239 , ILE C:242 , SER C:247BINDING SITE FOR RESIDUE K C 4026
19CC1SOFTWAREALA C:126 , GLU C:127 , GLU C:299 , MET C:300 , ASN C:301 , MN C:4024 , HOH C:4114 , HOH C:4709BINDING SITE FOR RESIDUE K C 4027
20CC2SOFTWARETHR E:143 , ALA E:144 , HOH E:4263BINDING SITE FOR RESIDUE K E 4066
21CC3SOFTWAREGLN C:829 , GLU C:841 , ADP C:4029 , HOH C:4570 , HOH C:4571BINDING SITE FOR RESIDUE MN C 4030
22CC4SOFTWAREGLU G:299 , ASN G:301 , HOH G:2947 , ADP G:4068 , MN G:4070 , PO4 G:4073BINDING SITE FOR RESIDUE MN G 4069
23CC5SOFTWAREGLU C:841 , ASN C:843 , ADP C:4029 , HOH C:4123BINDING SITE FOR RESIDUE K C 4031
24CC6SOFTWAREGLN G:285 , GLU G:299 , HOH G:2944 , ADP G:4068 , MN G:4069 , PO4 G:4073BINDING SITE FOR RESIDUE MN G 4070
25CC7SOFTWAREGLU C:761 , HIS C:781 , GLU C:783 , GLN C:784 , VAL C:787 , SER C:792BINDING SITE FOR RESIDUE K C 4032
26CC8SOFTWAREGLU G:215 , ASN G:236 , ASP G:238 , ALA G:239 , ILE G:242 , SER G:247BINDING SITE FOR RESIDUE K G 4071
27CC9SOFTWARETHR C:173 , MET C:174 , HOH C:4050BINDING SITE FOR RESIDUE CL C 4037
28DC1SOFTWAREALA G:126 , GLU G:127 , GLU G:299 , MET G:300 , ASN G:301 , HOH G:2947 , HOH G:2948BINDING SITE FOR RESIDUE K G 4072
29DC2SOFTWAREASN C:289 , ASN C:292 , ARG C:294BINDING SITE FOR RESIDUE CL C 4038
30DC3SOFTWAREGLN G:829 , GLU G:841 , ADP G:4074BINDING SITE FOR RESIDUE MN G 4075
31DC4SOFTWAREASN C:371 , PHE C:900 , PRO C:901 , GLY C:902BINDING SITE FOR RESIDUE CL C 4039
32DC5SOFTWAREGLU G:841 , ASN G:843 , ADP G:4074BINDING SITE FOR RESIDUE K G 4076
33DC6SOFTWAREGLU C:549 , ASP D:114 , HOH D:1501BINDING SITE FOR RESIDUE CL D 4040
34DC7SOFTWAREGLU G:761 , HIS G:781 , GLU G:783 , GLN G:784 , VAL G:787 , SER G:792BINDING SITE FOR RESIDUE K G 4077
35DC8SOFTWAREARG C:490 , HOH C:4558 , HIS D:16 , ASP D:112 , HOH D:1505BINDING SITE FOR RESIDUE K D 4041
36DC9SOFTWAREGLN G:93 , THR G:173 , MET G:174 , HOH G:2879BINDING SITE FOR RESIDUE CL G 4082
37EC1SOFTWAREGLU C:217 , THR C:244 , ASN C:283 , GLN C:285 , MN C:4025 , PO4 C:4028 , HOH C:4119BINDING SITE FOR RESIDUE K C 4042
38EC2SOFTWAREASN G:289 , ASN G:292 , ARG G:294BINDING SITE FOR RESIDUE CL G 4083
39EC3SOFTWAREASP C:84 , GLY C:112 , THR C:114 , HOH C:4134BINDING SITE FOR RESIDUE K C 4043
40EC4SOFTWAREASN G:371 , PRO G:901 , GLY G:902BINDING SITE FOR RESIDUE CL G 4084
41EC5SOFTWARETHR C:143 , ALA C:144 , HOH C:4221 , HOH C:4226BINDING SITE FOR RESIDUE K C 4044
42EC6SOFTWAREPHE H:15 , ASP H:114BINDING SITE FOR RESIDUE CL H 4085
43EC7SOFTWAREGLU E:299 , ASN E:301 , ADP E:4045 , MN E:4047 , PO4 E:4050 , HOH E:4144BINDING SITE FOR RESIDUE MN E 4046
44EC8SOFTWAREHIS H:16 , ASP H:112 , HOH H:3432 , HOH H:3435BINDING SITE FOR RESIDUE K H 4086
45EC9SOFTWAREGLN E:285 , GLU E:299 , ADP E:4045 , MN E:4046 , PO4 E:4050 , K E:4064 , HOH E:4141BINDING SITE FOR RESIDUE MN E 4047
46FC1SOFTWAREGLU G:217 , THR G:244 , ASN G:283 , GLN G:285 , HOH G:2953 , PO4 G:4073BINDING SITE FOR RESIDUE K G 4087
47FC2SOFTWAREGLU E:215 , ASN E:236 , ASP E:238 , ALA E:239 , ILE E:242 , SER E:247BINDING SITE FOR RESIDUE K E 4048
48FC3SOFTWAREASP G:84 , GLY G:112 , THR G:114 , HOH G:2968 , HOH G:2970BINDING SITE FOR RESIDUE K G 4088
49FC4SOFTWAREALA E:126 , GLU E:127 , GLU E:299 , MET E:300 , ASN E:301 , HOH E:4145BINDING SITE FOR RESIDUE K E 4049
50FC5SOFTWARETHR G:143 , ALA G:144 , HOH G:3052 , HOH G:3058BINDING SITE FOR RESIDUE K G 4089
51FC6SOFTWAREGLN E:829 , GLU E:841 , ADP E:4051 , HOH E:4614 , HOH E:4615BINDING SITE FOR RESIDUE MN E 4052
52FC7SOFTWAREGLU E:841 , ASN E:843 , ADP E:4051 , HOH E:4154BINDING SITE FOR RESIDUE K E 4053
53FC8SOFTWAREGLU E:761 , HIS E:781 , GLU E:783 , GLN E:784 , VAL E:787 , SER E:792BINDING SITE FOR RESIDUE K E 4054
54FC9SOFTWAREGLN E:93 , THR E:173 , MET E:174 , HOH E:4080 , HOH E:4083BINDING SITE FOR RESIDUE CL E 4059
55GC1SOFTWAREASN E:289 , ASN E:292 , ARG E:294BINDING SITE FOR RESIDUE CL E 4060
56GC2SOFTWAREASN E:371 , PHE E:900 , PRO E:901 , GLY E:902BINDING SITE FOR RESIDUE CL E 4061
57GC3SOFTWAREGLU E:549 , HOH E:4605 , PHE F:15 , ASP F:114 , HOH F:2477BINDING SITE FOR RESIDUE CL F 4062
58GC4SOFTWAREHOH E:4605 , HIS F:16 , ASP F:112 , HOH F:2481 , HOH F:2482BINDING SITE FOR RESIDUE K F 4063
59GC5SOFTWAREGLU E:217 , THR E:244 , ASN E:283 , GLN E:285 , MN E:4047 , PO4 E:4050 , HOH E:4150BINDING SITE FOR RESIDUE K E 4064
60GC6SOFTWAREASP E:84 , GLY E:112 , THR E:114 , HOH E:4166 , HOH E:4169BINDING SITE FOR RESIDUE K E 4065
61GC7SOFTWAREMET E:174 , GLY E:175 , HIS E:243 , GLN E:285 , GLU E:299 , ASN E:301 , ARG E:303 , ARG E:306 , ADP E:4045 , MN E:4046 , MN E:4047 , K E:4064 , HOH E:4150BINDING SITE FOR RESIDUE PO4 E 4050
62GC8SOFTWAREGLU E:560BINDING SITE FOR RESIDUE PO4 E 4067
63GC9SOFTWAREMET G:174 , GLY G:175 , HIS G:243 , GLN G:285 , GLU G:299 , ASN G:301 , ARG G:303 , ARG G:306 , HOH G:2944 , HOH G:2953 , ADP G:4068 , MN G:4069 , MN G:4070 , K G:4087BINDING SITE FOR RESIDUE PO4 G 4073
64HC1SOFTWAREMET A:174 , GLY A:175 , HIS A:243 , GLN A:285 , GLU A:299 , ASN A:301 , ARG A:303 , ARG A:306 , ADP A:4000 , MN A:4001 , MN A:4002 , K A:4020 , HOH A:4089 , HOH A:4098BINDING SITE FOR RESIDUE PO4 A 4006
65HC2SOFTWAREMET C:174 , GLY C:175 , HIS C:243 , GLN C:285 , GLU C:299 , ASN C:301 , ARG C:303 , ARG C:306 , ADP C:4023 , MN C:4024 , MN C:4025 , K C:4042 , HOH C:4110 , HOH C:4119 , HOH C:4120BINDING SITE FOR RESIDUE PO4 C 4028
66HC3SOFTWAREGLU C:783 , ASP C:791 , GLU C:892 , LEU C:907 , TYR C:1040 , ASP C:1041 , THR C:1042 , HOH C:4075 , HOH C:4077 , HOH C:4105BINDING SITE FOR RESIDUE ORN C 4033
67HC4SOFTWARESER D:47 , ASN D:240 , GLY D:241 , GLY D:243 , SER D:269 , LEU D:270 , GLN D:273 , ASN D:311 , HIS D:312 , GLY D:313 , PHE D:314 , HIS D:353 , HOH D:995BINDING SITE FOR RESIDUE GLN D 4034
68HC5SOFTWAREARG C:528 , ALA C:537 , THR C:538 , GLU C:552 , ASN C:554 , HOH C:4450 , HOH C:4451 , HOH C:4456 , HOH C:4566 , ARG D:120 , ARG D:123BINDING SITE FOR RESIDUE GLN C 4035
69HC6SOFTWAREGLN C:22 , THR C:94 , ASN C:97 , ASN C:936BINDING SITE FOR RESIDUE NET C 4036
70HC7SOFTWAREARG E:129 , ILE E:167 , ARG E:169 , THR E:173 , MET E:174 , GLY E:175 , GLY E:176 , GLU E:208 , LEU E:210 , ILE E:211 , GLU E:215 , MET E:240 , GLY E:241 , ILE E:242 , HIS E:243 , THR E:244 , GLN E:285 , ILE E:298 , GLU E:299 , THR E:376 , MN E:4046 , MN E:4047 , PO4 E:4050 , HOH E:4137 , HOH E:4141 , HOH E:4144 , HOH E:4613BINDING SITE FOR RESIDUE ADP E 4045
71HC8SOFTWAREPRO E:690 , ARG E:715 , MET E:725 , HIS E:754 , PHE E:755 , LEU E:756 , GLU E:761 , ALA E:785 , GLY E:786 , VAL E:787 , HIS E:788 , SER E:789 , GLN E:829 , GLU E:841 , MN E:4052 , K E:4053 , HOH E:4153 , HOH E:4154 , HOH E:4156 , HOH E:4614BINDING SITE FOR RESIDUE ADP E 4051
72HC9SOFTWAREGLU E:783 , ASP E:791 , GLU E:892 , LEU E:907 , TYR E:1040 , ASP E:1041 , THR E:1042 , HOH E:4105 , HOH E:4136 , HOH E:4616BINDING SITE FOR RESIDUE ORN E 4055
73IC1SOFTWARESER F:47 , ASN F:240 , GLY F:241 , PRO F:242 , GLY F:243 , SER F:269 , LEU F:270 , GLN F:273 , ASN F:311 , HIS F:312 , GLY F:313 , PHE F:314 , HOH F:1956BINDING SITE FOR RESIDUE GLN F 4056
74IC2SOFTWAREARG E:528 , ALA E:537 , THR E:538 , GLU E:552 , ASN E:554 , HOH E:4492 , HOH E:4493 , HOH E:4720 , HOH E:4721 , ARG F:120 , ARG F:123BINDING SITE FOR RESIDUE GLN E 4057
75IC3SOFTWAREGLN E:22 , THR E:94 , ASN E:936BINDING SITE FOR RESIDUE NET E 4058
76IC4SOFTWAREARG G:129 , ILE G:167 , ARG G:169 , THR G:173 , MET G:174 , GLY G:175 , GLY G:176 , GLU G:208 , LEU G:210 , ILE G:211 , GLU G:215 , MET G:240 , GLY G:241 , ILE G:242 , HIS G:243 , THR G:244 , GLN G:285 , GLU G:299 , HOH G:2940 , HOH G:2944 , HOH G:3549 , MN G:4069 , MN G:4070 , PO4 G:4073BINDING SITE FOR RESIDUE ADP G 4068
77IC5SOFTWAREARG G:715 , MET G:725 , HIS G:754 , PHE G:755 , LEU G:756 , GLU G:761 , ALA G:785 , GLY G:786 , VAL G:787 , HIS G:788 , SER G:789 , GLN G:829 , GLU G:841 , MN G:4075 , K G:4076BINDING SITE FOR RESIDUE ADP G 4074
78IC6SOFTWAREGLU G:783 , ASP G:791 , GLU G:892 , VAL G:893 , LEU G:907 , TYR G:1040 , ASP G:1041 , THR G:1042 , HOH G:2901 , HOH G:2932BINDING SITE FOR RESIDUE ORN G 4078
79IC7SOFTWAREARG A:129 , ILE A:167 , ARG A:169 , MET A:174 , GLY A:175 , GLY A:176 , GLU A:208 , LEU A:210 , ILE A:211 , GLU A:215 , MET A:240 , GLY A:241 , ILE A:242 , HIS A:243 , THR A:244 , GLN A:285 , ILE A:298 , GLU A:299 , THR A:376 , MN A:4001 , MN A:4002 , PO4 A:4006 , HOH A:4085 , HOH A:4089 , HOH A:4092 , HOH A:4556BINDING SITE FOR RESIDUE ADP A 4000
80IC8SOFTWARESER H:47 , ASN H:240 , GLY H:241 , PRO H:242 , GLY H:243 , SER H:269 , LEU H:270 , GLN H:273 , ASN H:311 , HIS H:312 , GLY H:313 , PHE H:314 , HIS H:353 , HOH H:2934 , HOH H:2938BINDING SITE FOR RESIDUE GLN H 4079
81IC9SOFTWAREARG G:528 , ALA G:537 , THR G:538 , GLU G:552 , ASN G:554 , HOH G:3308 , ARG H:120 , ARG H:123BINDING SITE FOR RESIDUE GLN G 4080
82JC1SOFTWAREPRO A:690 , ARG A:715 , MET A:725 , HIS A:754 , PHE A:755 , LEU A:756 , GLU A:761 , ALA A:785 , GLY A:786 , VAL A:787 , HIS A:788 , SER A:789 , GLN A:829 , GLU A:841 , MN A:4008 , K A:4009 , HOH A:4103 , HOH A:4557BINDING SITE FOR RESIDUE ADP A 4007
83JC2SOFTWAREVAL G:19 , THR G:94 , ASN G:97BINDING SITE FOR RESIDUE NET G 4081
84JC3SOFTWAREGLU A:783 , ASP A:791 , GLU A:892 , LEU A:895 , LEU A:907 , TYR A:1040 , ASP A:1041 , THR A:1042 , HOH A:4053 , HOH A:4084BINDING SITE FOR RESIDUE ORN A 4011
85JC4SOFTWARESER B:47 , ASN B:240 , GLY B:241 , PRO B:242 , GLY B:243 , SER B:269 , LEU B:270 , GLN B:273 , ASN B:311 , HIS B:312 , GLY B:313 , PHE B:314 , HIS B:353 , HOH B:4021 , HOH B:4025BINDING SITE FOR RESIDUE GLN B 4012
86JC5SOFTWAREARG A:528 , ALA A:537 , THR A:538 , GLU A:552 , ASN A:554 , HOH A:4436 , HOH A:4437 , HOH A:4561 , ARG B:120 , ARG B:123BINDING SITE FOR RESIDUE GLN A 4013
87JC6SOFTWAREGLN A:22 , THR A:94 , ASN A:936BINDING SITE FOR RESIDUE NET A 4014
88JC7SOFTWAREARG C:129 , ILE C:167 , ARG C:169 , THR C:173 , MET C:174 , GLY C:175 , GLY C:176 , GLU C:208 , LEU C:210 , ILE C:211 , GLU C:215 , MET C:240 , GLY C:241 , ILE C:242 , HIS C:243 , THR C:244 , GLN C:285 , ILE C:298 , GLU C:299 , THR C:376 , MN C:4024 , MN C:4025 , PO4 C:4028 , HOH C:4106 , HOH C:4110 , HOH C:4113 , HOH C:4567BINDING SITE FOR RESIDUE ADP C 4023
89JC8SOFTWAREPRO C:690 , ARG C:715 , MET C:725 , HIS C:754 , PHE C:755 , LEU C:756 , GLU C:761 , ALA C:785 , GLY C:786 , VAL C:787 , HIS C:788 , SER C:789 , GLN C:829 , GLU C:841 , MN C:4030 , K C:4031 , HOH C:4122 , HOH C:4123 , HOH C:4570 , HOH C:4571BINDING SITE FOR RESIDUE ADP C 4029

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1C3O)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric/Biological Unit
No.Residues
1Phe A:164 -Pro A:165
2Ala A:251 -Pro A:252
3Tyr A:710 -Pro A:711
4Leu A:796 -Pro A:797
5Arg A:998 -Pro A:999
6Ser B:357 -Pro B:358
7Phe C:164 -Pro C:165
8Ala C:251 -Pro C:252
9Tyr C:710 -Pro C:711
10Leu C:796 -Pro C:797
11Arg C:998 -Pro C:999
12Ser D:357 -Pro D:358
13Phe E:164 -Pro E:165
14Ala E:251 -Pro E:252
15Tyr E:710 -Pro E:711
16Leu E:796 -Pro E:797
17Arg E:998 -Pro E:999
18Ser F:357 -Pro F:358
19Phe G:164 -Pro G:165
20Ala G:251 -Pro G:252
21Tyr G:710 -Pro G:711
22Leu G:796 -Pro G:797
23Arg G:998 -Pro G:999
24Ser H:357 -Pro H:358

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1C3O)

(-) PROSITE Motifs  (2, 16)

Asymmetric/Biological Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846

(-) Exons   (0, 0)

(no "Exon" information available for 1C3O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1c3oa3 A:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1c3oa5 A:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1c3oa1 A:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1c3oa4 A:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1c3oa6 A:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1c3oa2 A:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1c3oA01 A:1-116  [code=3.40.50.20, no name defined]                                                                 1c3oA02                 1c3oA03 A:141-210 ATP-grasp fold, A domain                            1c3oA02 A:117-140,A:211-403 ATP-grasp fold, B domain                                                                                                                                             1c3oA04 A:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1c3oA05 A:554-663  [code=3.40.50.20, no name defined]                                                         1c3oA06                1c3oA07 A:687-756 ATP-grasp fo       ld, A domain                     1c3oA06 A:664-686,A:757-936 ATP-grasp fold, B domain                                                                                                                                1c3oA08 A:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.........hhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh........hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeeee........hhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......eee..hhhhhhhhhhhhh..eee..-------..eee.hhhhhhhhhhhh--------.eee......eeeeeeeee....eeeeeeeeeeee...hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeee....eeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh.......eeeeee.hhhhh.hhhhhhhhhhhhheeeeeehhhhhhhhhh....eee........hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhhh........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o A    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3ob1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3ob2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oB01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oB02 B:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain B from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3ob1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3ob2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oB01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oB02 B:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhhh.eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain C from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1c3oc3 C:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1c3oc5 C:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1c3oc1 C:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1c3oc4 C:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1c3oc6 C:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1c3oc2 C:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1c3oC01 C:1-116  [code=3.40.50.20, no name defined]                                                                 1c3oC02                 1c3oC03 C:141-210 ATP-grasp fold, A domain                            1c3oC02 C:117-140,C:211-403 ATP-grasp fold, B domain                                                                                                                                             1c3oC04 C:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1c3oC05 C:554-663  [code=3.40.50.20, no name defined]                                                         1c3oC06                1c3oC07 C:687-756 ATP-grasp fo       ld, A domain                     1c3oC06 C:664-686,C:757-936 ATP-grasp fold, B domain                                                                                                                                1c3oC08 C:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeee.........hhhhh.eee....hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh..hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhh.....ee.........hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o C    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain D from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3od1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3od2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oD01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oD02 D:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain D from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3od1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3od2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oD01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oD02 D:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.............hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain E from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1c3oe3 E:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1c3oe5 E:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1c3oe1 E:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1c3oe4 E:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1c3oe6 E:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1c3oe2 E:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1c3oE01 E:1-116  [code=3.40.50.20, no name defined]                                                                 1c3oE02                 1c3oE03 E:141-210 ATP-grasp fold, A domain                            1c3oE02 E:117-140,E:211-403 ATP-grasp fold, B domain                                                                                                                                             1c3oE04 E:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1c3oE05 E:554-663  [code=3.40.50.20, no name defined]                                                         1c3oE06                1c3oE07 E:687-756 ATP-grasp fo       ld, A domain                     1c3oE06 E:664-686,E:757-936 ATP-grasp fold, B domain                                                                                                                                1c3oE08 E:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh........hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhhh.eeeeee....hhhhhhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.......hhhhhhhhhhhh..eeeehhhhhhhhhh.....ee..hhhhh..hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o E    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain F from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3of1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3of2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oF02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee..............hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain F from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3of1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3of2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oF02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhhh.eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee..............hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain G from PDB  Type:PROTEIN  Length:1058
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1c3og3 G:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1c3og5 G:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1c3og1 G:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1c3og4 G:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1c3og6 G:677-935 Carbamoyl phosphate sy       nthetase (CPS), la        rge subunit ATP-binding domains                                                                                                                                                           d1c3og2 G:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1c3oG01 G:1-116  [code=3.40.50.20, no name defined]                                                                 1c3oG02                 1c3oG03 G:141-210 ATP-grasp fold, A domain                            1c3oG02 G:117-140,G:211-403 ATP-grasp fold, B domain                                                                                                                                             1c3oG04 G:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1c3oG05 G:554-663  [code=3.40.50.20, no name defined]                                                         1c3oG06                1c3oG07 G:687-756 ATP-grasp fo       ld, A domain                     1c3oG06 G:664-686,G:757-936 ATP-grasp fold, B domain                                                                                                                                1c3oG08 G:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhh....eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhhh.eeeee.........hhhhh.eee....hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee.-------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh..hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhh..eeeeehhhhhhhhh.....eee........hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhhh.eee.hhhhhhhhhhhhhh.......hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o G    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710     |   -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     716     724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain H from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3oh1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3oh2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oH01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oH02 H:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee.....................eeeeeee...hhhhhhhhhh..eeeeeee...hhhhhhhh...eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.........hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain H from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1c3oh1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1c3oh2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1c3oH01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1c3oH02 H:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhh..eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee.....................eeeeeee...hhhhhhhhhh..eeeeeee...hhhhhhhh...eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee.........hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1c3o H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 32)

Asymmetric/Biological Unit

(-) CATH Domains  (7, 40)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
1a1c3oA06A:664-686,A:757-936
1b1c3oC06C:664-686,C:757-936
1c1c3oE06E:664-686,E:757-936
1d1c3oG06G:664-686,G:757-936
1e1c3oA02A:117-140,A:211-403
1f1c3oC02C:117-140,C:211-403
1g1c3oE02E:117-140,E:211-403
1h1c3oG02G:117-140,G:211-403
2a1c3oA03A:141-210
2b1c3oC03C:141-210
2c1c3oE03E:141-210
2d1c3oG03G:141-210
2e1c3oA07A:687-756
2f1c3oC07C:687-756
2g1c3oE07E:687-756
2h1c3oG07G:687-756

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1C3O)

(-) Gene Ontology  (21, 43)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,C,E,G   (CARB_ECOLI | P00968)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004087    carbamoyl-phosphate synthase (ammonia) activity    Catalysis of the reaction: 2 ATP + CO(2) + H(2)O + NH(4)(+) = 2 ADP + carbamoyl phosphate + 5 H(+) + phosphate.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0019856    pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (CARA_ECO57 | P0A6F2)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

Chain B,D,F,H   (CARA_ECOLI | P0A6F1)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

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        CARA_ECO57 | P0A6F21a9x 1c30 1cs0 1jdb 1kee 1m6v 1t36
        CARA_ECOLI | P0A6F11a9x 1bxr 1c30 1ce8 1cs0 1jdb 1kee 1m6v 1t36
        CARB_ECOLI | P009681a9x 1bxr 1c30 1ce8 1cs0 1jdb 1kee 1m6v 1t36

(-) Related Entries Specified in the PDB File

1cs0