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(-) Description

Title :  CRYSTAL STRUCTURE OF THE G359F (SMALL SUBUNIT) POINT MUTANT OF CARBAMOYL PHOSPHATE SYNTHETASE
 
Authors :  J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
Date :  17 Jul 02  (Deposition) - 31 Jul 02  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Substrate Channeling, Tunnel, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. B. Thoden, X. Huang, F. M. Raushel, H. M. Holden
Carbamoyl-Phosphate Synthetase. Creation Of An Escape Route For Ammonia
J. Biol. Chem. V. 277 39722 2002
PubMed-ID: 12130656  |  Reference-DOI: 10.1074/JBC.M206915200

(-) Compounds

Molecule 1 - CARBAMOYL PHOSPHATE SYNTHETASE LARGE CHAIN
    ChainsA, C, E, G
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCARB
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562
    SynonymCARBAMOYL-PHOSPHATE SYNTHETASE AMMONIA CHAIN
 
Molecule 2 - CARBAMOYL-PHOSPHATE SYNTHETASE SMALL CHAIN
    ChainsB, D, F, H
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCARA
    MutationYES
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562
    SynonymCARBAMOYL-PHOSPHATE SYNTHETASE GLUTAMINE CHAIN

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 86)

Asymmetric/Biological Unit (7, 86)
No.NameCountTypeFull Name
1ADP8Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL28Ligand/IonCHLORIDE ION
3K26Ligand/IonPOTASSIUM ION
4MN12Ligand/IonMANGANESE (II) ION
5NET4Ligand/IonTETRAETHYLAMMONIUM ION
6ORN4Ligand/IonL-ORNITHINE
7PO44Ligand/IonPHOSPHATE ION

(-) Sites  (86, 86)

Asymmetric Unit (86, 86)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:299 , ASN A:301 , ADP A:4001 , MN A:4003 , PO4 A:4006 , HOH A:4111BINDING SITE FOR RESIDUE MN A 4002
02AC2SOFTWAREGLN A:285 , GLU A:299 , ADP A:4001 , MN A:4002 , PO4 A:4006 , HOH A:4537BINDING SITE FOR RESIDUE MN A 4003
03AC3SOFTWAREGLU A:215 , ASN A:236 , ASP A:238 , ALA A:239 , ILE A:242 , SER A:247BINDING SITE FOR RESIDUE K A 4004
04AC4SOFTWAREALA A:126 , GLU A:127 , GLU A:299 , MET A:300 , ASN A:301 , HOH A:4111 , HOH A:4112 , HOH A:4113BINDING SITE FOR RESIDUE K A 4005
05AC5SOFTWAREGLN A:829 , GLU A:841 , ADP A:4007 , HOH A:4590 , HOH A:4638BINDING SITE FOR RESIDUE MN A 4008
06AC6SOFTWAREGLU A:841 , ASN A:843 , ADP A:4007 , HOH A:4434BINDING SITE FOR RESIDUE K A 4009
07AC7SOFTWAREGLU A:761 , HIS A:781 , GLU A:783 , GLN A:784 , VAL A:787 , SER A:792BINDING SITE FOR RESIDUE K A 4010
08AC8SOFTWAREASP A:84 , GLY A:112 , THR A:114 , HOH A:4021 , HOH A:4679 , HOH A:4680BINDING SITE FOR RESIDUE K A 4013
09AC9SOFTWAREHOH A:4363 , HIS B:16 , ASP B:112 , HOH B:4042 , HOH B:4089BINDING SITE FOR RESIDUE K B 4014
10BC1SOFTWARETHR A:173 , MET A:174 , HOH A:4048 , HOH A:4093BINDING SITE FOR RESIDUE CL A 4015
11BC2SOFTWAREASN A:289 , ASN A:292 , ARG A:294BINDING SITE FOR RESIDUE CL A 4016
12BC3SOFTWAREALA A:370 , ASN A:371 , PHE A:900 , PRO A:901 , GLY A:902 , HOH A:4167BINDING SITE FOR RESIDUE CL A 4017
13BC4SOFTWARELYS A:475 , ASN A:485BINDING SITE FOR RESIDUE CL A 4018
14BC5SOFTWAREHOH A:4363 , ILE B:113 , ASP B:114 , HOH B:4041BINDING SITE FOR RESIDUE CL B 4019
15BC6SOFTWAREPHE A:578 , ALA A:847 , ARG A:848BINDING SITE FOR RESIDUE CL A 4020
16BC7SOFTWAREGLU C:299 , ASN C:301 , ADP C:4021 , MN C:4023 , PO4 C:4026 , HOH C:4133BINDING SITE FOR RESIDUE MN C 4022
17BC8SOFTWAREGLN C:285 , GLU C:299 , ADP C:4021 , MN C:4022 , PO4 C:4026 , HOH C:4628BINDING SITE FOR RESIDUE MN C 4023
18BC9SOFTWAREGLU C:215 , ASN C:236 , ASP C:238 , ALA C:239 , ILE C:242 , SER C:247BINDING SITE FOR RESIDUE K C 4024
19CC1SOFTWAREALA C:126 , GLU C:127 , GLU C:299 , MET C:300 , ASN C:301 , HOH C:4133 , HOH C:4135BINDING SITE FOR RESIDUE K C 4025
20CC2SOFTWAREGLN C:829 , GLU C:841 , ADP C:4027 , HOH C:4630 , HOH C:4631BINDING SITE FOR RESIDUE MN C 4028
21CC3SOFTWAREGLU C:841 , ADP C:4027 , HOH C:4440BINDING SITE FOR RESIDUE K C 4029
22CC4SOFTWAREGLU C:761 , HIS C:781 , GLU C:783 , GLN C:784 , VAL C:787 , SER C:792BINDING SITE FOR RESIDUE K C 4030
23CC5SOFTWAREASP C:84 , GLY C:112 , THR C:114BINDING SITE FOR RESIDUE K C 4033
24CC6SOFTWARETHR C:143 , ALA C:144 , HOH C:4143 , HOH C:4145BINDING SITE FOR RESIDUE K C 4034
25CC7SOFTWAREHOH C:4372 , HIS D:16 , ASP D:112 , HOH D:1022BINDING SITE FOR RESIDUE K D 4035
26CC8SOFTWAREMET C:174 , NET C:4032 , HOH C:4070 , HOH C:4115BINDING SITE FOR RESIDUE CL C 4036
27CC9SOFTWARETRP C:71BINDING SITE FOR RESIDUE CL C 4037
28DC1SOFTWAREASN C:289 , ASN C:292 , ARG C:294BINDING SITE FOR RESIDUE CL C 4038
29DC2SOFTWAREALA C:370 , ASN C:371 , PHE C:900 , PRO C:901 , GLY C:902BINDING SITE FOR RESIDUE CL C 4039
30DC3SOFTWARELYS C:475 , ASN C:485 , HOH C:4567BINDING SITE FOR RESIDUE CL C 4040
31DC4SOFTWAREGLU C:549 , ILE D:113 , ASP D:114 , HOH D:1021BINDING SITE FOR RESIDUE CL C 4041
32DC5SOFTWAREALA C:847 , ARG C:848BINDING SITE FOR RESIDUE CL C 4042
33DC6SOFTWARESER D:169 , TRP D:170 , THR D:171BINDING SITE FOR RESIDUE CL D 4043
34DC7SOFTWAREGLU E:299 , ASN E:301 , HOH E:1271 , ADP E:4044 , MN E:4046 , PO4 E:4049BINDING SITE FOR RESIDUE MN E 4045
35DC8SOFTWAREHIS E:243 , GLN E:285 , GLU E:299 , HOH E:2516 , ADP E:4044 , MN E:4045 , PO4 E:4049BINDING SITE FOR RESIDUE MN E 4046
36DC9SOFTWAREGLU E:215 , ASN E:236 , ASP E:238 , ALA E:239 , ILE E:242 , SER E:247BINDING SITE FOR RESIDUE K E 4047
37EC1SOFTWAREALA E:126 , GLU E:127 , GLU E:299 , MET E:300 , ASN E:301 , HOH E:1271 , HOH E:1273BINDING SITE FOR RESIDUE K E 4048
38EC2SOFTWAREGLN E:829 , GLU E:841 , HOH E:2518 , HOH E:2519 , ADP E:4050BINDING SITE FOR RESIDUE MN E 4051
39EC3SOFTWAREGLU E:841 , ASN E:843 , HOH E:1603 , HOH E:1604 , ADP E:4050BINDING SITE FOR RESIDUE K E 4052
40EC4SOFTWAREGLU E:761 , HIS E:781 , GLU E:783 , GLN E:784 , VAL E:787 , SER E:792BINDING SITE FOR RESIDUE K E 4053
41EC5SOFTWAREASP E:84 , GLY E:112 , THR E:114 , HOH E:1176 , HOH E:2520BINDING SITE FOR RESIDUE K E 4056
42EC6SOFTWARETHR E:143 , ALA E:144 , HOH E:1280 , HOH E:1282BINDING SITE FOR RESIDUE K E 4057
43EC7SOFTWAREHOH E:1526 , HOH E:1558 , HOH E:2780 , HIS F:16 , ASP F:112BINDING SITE FOR RESIDUE K F 4058
44EC8SOFTWAREGLN E:93 , THR E:173 , MET E:174 , HOH E:1203 , HOH E:1252BINDING SITE FOR RESIDUE CL E 4059
45EC9SOFTWARETRP E:71BINDING SITE FOR RESIDUE CL E 4060
46FC1SOFTWAREASN E:289 , ASN E:292 , ARG E:294BINDING SITE FOR RESIDUE CL E 4061
47FC2SOFTWAREALA E:370 , ASN E:371 , PHE E:900 , PRO E:901 , GLY E:902BINDING SITE FOR RESIDUE CL E 4062
48FC3SOFTWARELYS E:475 , ASN E:485 , HOH E:2644BINDING SITE FOR RESIDUE CL E 4063
49FC4SOFTWAREPHE F:15 , ASP F:114BINDING SITE FOR RESIDUE CL F 4064
50FC5SOFTWAREARG E:845 , ALA E:847 , ARG E:848BINDING SITE FOR RESIDUE CL E 4065
51FC6SOFTWAREGLU G:299 , ASN G:301 , ADP G:4066 , MN G:4068 , PO4 G:4071 , HOH G:4181BINDING SITE FOR RESIDUE MN G 4067
52FC7SOFTWAREGLN G:285 , GLU G:299 , ADP G:4066 , MN G:4067 , PO4 G:4071 , HOH G:4540BINDING SITE FOR RESIDUE MN G 4068
53FC8SOFTWAREGLU G:215 , ASN G:236 , ASP G:238 , ALA G:239 , ILE G:242 , SER G:247BINDING SITE FOR RESIDUE K G 4069
54FC9SOFTWAREALA G:126 , GLU G:127 , GLU G:299 , MET G:300 , ASN G:301 , HOH G:4183BINDING SITE FOR RESIDUE K G 4070
55GC1SOFTWAREGLN G:829 , GLU G:841 , ADP G:4072 , HOH G:4541 , HOH G:4542BINDING SITE FOR RESIDUE MN G 4073
56GC2SOFTWAREGLU G:841 , ASN G:843 , ADP G:4072 , HOH G:4464BINDING SITE FOR RESIDUE K G 4074
57GC3SOFTWAREGLU G:761 , HIS G:781 , GLU G:783 , GLN G:784 , VAL G:787 , SER G:792BINDING SITE FOR RESIDUE K G 4075
58GC4SOFTWAREASP G:84 , GLY G:112 , THR G:114BINDING SITE FOR RESIDUE K G 4078
59GC5SOFTWARETHR G:143 , ALA G:144 , HOH G:4190 , HOH G:4192BINDING SITE FOR RESIDUE K G 4079
60GC6SOFTWAREGLN G:93 , THR G:173 , MET G:174 , HOH G:4161BINDING SITE FOR RESIDUE CL G 4080
61GC7SOFTWARETRP G:71BINDING SITE FOR RESIDUE CL G 4081
62GC8SOFTWAREASN G:289 , ASN G:292 , ARG G:294BINDING SITE FOR RESIDUE CL G 4082
63GC9SOFTWAREALA G:370 , ASN G:371 , PHE G:900 , PRO G:901 , GLY G:902BINDING SITE FOR RESIDUE CL G 4083
64HC1SOFTWARELYS G:475 , ASN G:485BINDING SITE FOR RESIDUE CL G 4084
65HC2SOFTWAREPHE H:15 , ASP H:114 , HOH H:2082BINDING SITE FOR RESIDUE CL H 4085
66HC3SOFTWAREARG G:845 , ALA G:847 , ARG G:848BINDING SITE FOR RESIDUE CL G 4086
67HC4SOFTWAREMET A:174 , GLY A:175 , HIS A:243 , GLN A:285 , GLU A:299 , ASN A:301 , ARG A:303 , ARG A:306 , ADP A:4001 , MN A:4002 , MN A:4003 , HOH A:4055 , HOH A:4214 , HOH A:4215BINDING SITE FOR RESIDUE PO4 A 4006
68HC5SOFTWAREMET C:174 , GLY C:175 , HIS C:243 , GLN C:285 , GLU C:299 , ASN C:301 , ARG C:303 , ARG C:306 , ADP C:4021 , MN C:4022 , MN C:4023 , HOH C:4077 , HOH C:4231 , HOH C:4232BINDING SITE FOR RESIDUE PO4 C 4026
69HC6SOFTWAREMET E:174 , GLY E:175 , HIS E:243 , GLN E:285 , GLU E:299 , ASN E:301 , ARG E:303 , ARG E:306 , HOH E:1210 , HOH E:1371 , HOH E:1372 , ADP E:4044 , MN E:4045 , MN E:4046BINDING SITE FOR RESIDUE PO4 E 4049
70HC7SOFTWAREMET G:174 , GLY G:175 , HIS G:243 , GLN G:285 , GLU G:299 , ASN G:301 , ARG G:303 , ARG G:306 , ADP G:4066 , MN G:4067 , MN G:4068 , HOH G:4123 , HOH G:4275 , HOH G:4276 , HOH G:4540BINDING SITE FOR RESIDUE PO4 G 4071
71HC8SOFTWAREARG A:129 , ILE A:167 , ARG A:169 , MET A:174 , GLY A:175 , GLY A:176 , ASP A:207 , GLU A:208 , LEU A:210 , ILE A:211 , GLU A:215 , MET A:240 , GLY A:241 , ILE A:242 , HIS A:243 , THR A:244 , GLN A:285 , GLU A:299 , THR A:376 , MN A:4002 , MN A:4003 , PO4 A:4006 , HOH A:4111 , HOH A:4144 , HOH A:4157 , HOH A:4537BINDING SITE FOR RESIDUE ADP A 4001
72HC9SOFTWAREARG A:715 , MET A:725 , HIS A:754 , PHE A:755 , LEU A:756 , GLU A:761 , ALA A:785 , GLY A:786 , VAL A:787 , HIS A:788 , SER A:789 , GLN A:829 , GLU A:841 , PRO A:909 , MN A:4008 , K A:4009 , HOH A:4432 , HOH A:4434 , HOH A:4590 , HOH A:4638BINDING SITE FOR RESIDUE ADP A 4007
73IC1SOFTWAREGLU A:783 , ASP A:791 , ALA A:793 , GLU A:892 , VAL A:893 , LEU A:907 , TYR A:1040 , ASP A:1041 , THR A:1042 , HOH A:4448 , HOH A:4468 , HOH A:4473 , HOH A:4639BINDING SITE FOR RESIDUE ORN A 4011
74IC2SOFTWAREGLN A:22 , THR A:94 , ASN A:936BINDING SITE FOR RESIDUE NET A 4012
75IC3SOFTWAREARG C:129 , ILE C:167 , ARG C:169 , THR C:173 , MET C:174 , GLY C:175 , GLY C:176 , ASP C:207 , GLU C:208 , SER C:209 , LEU C:210 , ILE C:211 , GLU C:215 , MET C:240 , GLY C:241 , ILE C:242 , HIS C:243 , THR C:244 , GLN C:285 , ILE C:298 , GLU C:299 , THR C:376 , MN C:4022 , MN C:4023 , PO4 C:4026 , HOH C:4133 , HOH C:4175 , HOH C:4628BINDING SITE FOR RESIDUE ADP C 4021
76IC4SOFTWAREPRO C:690 , ARG C:715 , MET C:725 , HIS C:754 , PHE C:755 , LEU C:756 , GLU C:761 , ALA C:785 , GLY C:786 , VAL C:787 , HIS C:788 , SER C:789 , GLN C:829 , GLU C:841 , MN C:4028 , K C:4029 , HOH C:4439 , HOH C:4440 , HOH C:4630 , HOH C:4631BINDING SITE FOR RESIDUE ADP C 4027
77IC5SOFTWAREGLU C:783 , ASP C:791 , ALA C:793 , GLU C:892 , VAL C:893 , LEU C:907 , TYR C:1040 , ASP C:1041 , THR C:1042 , HOH C:4452 , HOH C:4476BINDING SITE FOR RESIDUE ORN C 4031
78IC6SOFTWARETHR C:94 , CL C:4036BINDING SITE FOR RESIDUE NET C 4032
79IC7SOFTWAREARG E:129 , ILE E:167 , ARG E:169 , MET E:174 , GLY E:175 , GLY E:176 , GLU E:208 , LEU E:210 , ILE E:211 , GLU E:215 , MET E:240 , GLY E:241 , ILE E:242 , HIS E:243 , THR E:244 , GLN E:285 , GLU E:299 , THR E:376 , HOH E:1271 , HOH E:1303 , HOH E:1315 , HOH E:2516 , MN E:4045 , MN E:4046 , PO4 E:4049BINDING SITE FOR RESIDUE ADP E 4044
80IC8SOFTWAREARG E:715 , MET E:725 , HIS E:754 , PHE E:755 , LEU E:756 , GLU E:761 , ALA E:785 , GLY E:786 , VAL E:787 , HIS E:788 , SER E:789 , GLN E:829 , GLU E:841 , HOH E:1577 , HOH E:1603 , HOH E:1604 , HOH E:2517 , HOH E:2518 , HOH E:2519 , MN E:4051 , K E:4052BINDING SITE FOR RESIDUE ADP E 4050
81IC9SOFTWAREGLU E:783 , ASP E:791 , GLU E:892 , LEU E:907 , TYR E:1040 , ASP E:1041 , THR E:1042 , HOH E:1617 , HOH E:1618 , HOH E:1644BINDING SITE FOR RESIDUE ORN E 4054
82JC1SOFTWARETHR E:94 , ASN E:936 , HOH E:1188BINDING SITE FOR RESIDUE NET E 4055
83JC2SOFTWAREARG G:129 , ILE G:167 , ARG G:169 , THR G:173 , MET G:174 , GLY G:175 , GLY G:176 , ASP G:207 , GLU G:208 , LEU G:210 , ILE G:211 , GLU G:215 , MET G:240 , GLY G:241 , ILE G:242 , HIS G:243 , THR G:244 , GLN G:285 , ILE G:298 , GLU G:299 , THR G:376 , MN G:4067 , MN G:4068 , PO4 G:4071 , HOH G:4181 , HOH G:4211 , HOH G:4222 , HOH G:4540BINDING SITE FOR RESIDUE ADP G 4066
84JC3SOFTWAREARG G:715 , HIS G:754 , PHE G:755 , LEU G:756 , GLU G:761 , ALA G:785 , GLY G:786 , VAL G:787 , HIS G:788 , SER G:789 , GLN G:829 , GLU G:841 , MN G:4073 , K G:4074 , HOH G:4444 , HOH G:4463 , HOH G:4464 , HOH G:4541 , HOH G:4542BINDING SITE FOR RESIDUE ADP G 4072
85JC4SOFTWAREGLU G:783 , ASP G:791 , GLU G:892 , LEU G:907 , TYR G:1040 , ASP G:1041 , THR G:1042 , HOH G:4476 , HOH G:4501 , HOH G:4511BINDING SITE FOR RESIDUE ORN G 4076
86JC5SOFTWAREGLN G:22 , THR G:94 , ASN G:97BINDING SITE FOR RESIDUE NET G 4077

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1M6V)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric/Biological Unit
No.Residues
1Phe A:164 -Pro A:165
2Ala A:251 -Pro A:252
3Tyr A:710 -Pro A:711
4Leu A:796 -Pro A:797
5Arg A:998 -Pro A:999
6Ser B:357 -Pro B:358
7Phe C:164 -Pro C:165
8Ala C:251 -Pro C:252
9Tyr C:710 -Pro C:711
10Leu C:796 -Pro C:797
11Arg C:998 -Pro C:999
12Ser D:357 -Pro D:358
13Phe E:164 -Pro E:165
14Ala E:251 -Pro E:252
15Tyr E:710 -Pro E:711
16Leu E:796 -Pro E:797
17Arg E:998 -Pro E:999
18Ser F:357 -Pro F:358
19Phe G:164 -Pro G:165
20Ala G:251 -Pro G:252
21Tyr G:710 -Pro G:711
22Leu G:796 -Pro G:797
23Arg G:998 -Pro G:999
24Ser H:357 -Pro H:358

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1M6V)

(-) PROSITE Motifs  (2, 16)

Asymmetric/Biological Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846

(-) Exons   (0, 0)

(no "Exon" information available for 1M6V)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:1059
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1m6va3 A:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1m6va5 A:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1m6va1 A:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1m6va4 A:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1m6va6 A:677-935 Carbamoyl phosphate syn      thetase (CPS), lar        ge subunit ATP-binding domains                                                                                                                                                            d1m6va2 A:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -1m6vA01 A:2-116  [code=3.40.50.20, no name defined]                                                                1m6vA02                 1m6vA03 A:141-210 ATP-grasp fold, A domain                            1m6vA02 A:117-140,A:211-403 ATP-grasp fold, B domain                                                                                                                                             1m6vA04 A:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1m6vA05 A:554-663  [code=3.40.50.20, no name defined]                                                         1m6vA06                1m6vA07 A:687-756 ATP-grasp fol      d, A domain                      1m6vA06 A:664-686,A:757-936 ATP-grasp fold, B domain                                                                                                                                1m6vA08 A:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee.........hhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..........................eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhh...eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeeee........hhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......eee..hhhhhhhhhhhhh..eeee..------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeee....eeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh.......eeeeee.hhhhhhhhhhhhhhhhhh.eeeeehhhhhhhhhhh....ee.........hhhhhhhhh...eeee...hhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhhh........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v A    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPS------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710      |  -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      717    724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vb1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vb2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vB01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vB02 B:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh......eeeee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee.....eeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain B from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vb1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vb2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vB01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vB02 B:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh......eeeee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee.....eeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain C from PDB  Type:PROTEIN  Length:1059
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1m6vc3 C:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1m6vc5 C:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1m6vc1 C:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1m6vc4 C:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1m6vc6 C:677-935 Carbamoyl phosphate syn      thetase (CPS), lar        ge subunit ATP-binding domains                                                                                                                                                            d1m6vc2 C:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -1m6vC01 C:2-116  [code=3.40.50.20, no name defined]                                                                1m6vC02                 1m6vC03 C:141-210 ATP-grasp fold, A domain                            1m6vC02 C:117-140,C:211-403 ATP-grasp fold, B domain                                                                                                                                             1m6vC04 C:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1m6vC05 C:554-663  [code=3.40.50.20, no name defined]                                                         1m6vC06                1m6vC07 C:687-756 ATP-grasp fol      d, A domain                      1m6vC06 C:664-686,C:757-936 ATP-grasp fold, B domain                                                                                                                                1m6vC08 C:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhh...eeee............eeeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh......eee..hhhhhhhhhhhhh..eeee..------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhhh.eeeehhhhhhhhhh.....ee.........hhhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v C    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPS------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710      |  -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      717    724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain D from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vd1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vd2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vD01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vD02 D:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee........----.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain D from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vd1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vd2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vD01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vD02 D:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhhh.eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh...eeeeeee.....eeeeee....eeee........----.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain E from PDB  Type:PROTEIN  Length:1059
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1m6ve3 E:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1m6ve5 E:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1m6ve1 E:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1m6ve4 E:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1m6ve6 E:677-935 Carbamoyl phosphate syn      thetase (CPS), lar        ge subunit ATP-binding domains                                                                                                                                                            d1m6ve2 E:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -1m6vE01 E:2-116  [code=3.40.50.20, no name defined]                                                                1m6vE02                 1m6vE03 E:141-210 ATP-grasp fold, A domain                            1m6vE02 E:117-140,E:211-403 ATP-grasp fold, B domain                                                                                                                                             1m6vE04 E:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1m6vE05 E:554-663  [code=3.40.50.20, no name defined]                                                         1m6vE06                1m6vE07 E:687-756 ATP-grasp fol      d, A domain                      1m6vE06 E:664-686,E:757-936 ATP-grasp fold, B domain                                                                                                                                1m6vE08 E:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhh...hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhh..................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhh....eeee.............eeeee..............eeeee.........hhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhh.eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......eee..hhhhhhhhhhhhh..eeee..------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeeeeee...hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh........eeeee.hhhhhhhhhhhhhhhhhhh.eeeeehhhhhhhhhh....eee........hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhh.........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v E    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPS------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710      |  -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      717    724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain F from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vf1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vf2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vF02 F:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhh..eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain F from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vf1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vf2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vF02 F:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeeee...hhhhhhhhhh..eeeeeee...hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeeee....eeeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain G from PDB  Type:PROTEIN  Length:1059
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1m6vg3 G:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1m6vg5 G:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1m6vg1 G:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1m6vg4 G:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1m6vg6 G:677-935 Carbamoyl phosphate syn      thetase (CPS), lar        ge subunit ATP-binding domains                                                                                                                                                            d1m6vg2 G:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -1m6vG01 G:2-116  [code=3.40.50.20, no name defined]                                                                1m6vG02                 1m6vG03 G:141-210 ATP-grasp fold, A domain                            1m6vG02 G:117-140,G:211-403 ATP-grasp fold, B domain                                                                                                                                             1m6vG04 G:404-553 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1m6vG05 G:554-663  [code=3.40.50.20, no name defined]                                                         1m6vG06                1m6vG07 G:687-756 ATP-grasp fol      d, A domain                      1m6vG06 G:664-686,G:757-936 ATP-grasp fold, B domain                                                                                                                                1m6vG08 G:937-1073  [code=3.40.50.1380, no name defined]                                                                                  CATH domains
           Pfam domains (1) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1m6vG09 G:424-547                                                                                               ----------CPSase_L_chain-1m6vG13 G:558-669                                                                                ----CPSase_L_D2-1m6vG01 G:674-877                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1m6vG21 G:956-1042                                                                 ------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1m6vG10 G:424-547                                                                                               ----------CPSase_L_chain-1m6vG14 G:558-669                                                                                ----CPSase_L_D2-1m6vG02 G:674-877                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1m6vG22 G:956-1042                                                                 ------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1m6vG11 G:424-547                                                                                               ----------CPSase_L_chain-1m6vG15 G:558-669                                                                                ----CPSase_L_D2-1m6vG03 G:674-877                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1m6vG23 G:956-1042                                                                 ------------------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1m6vG12 G:424-547                                                                                               ----------CPSase_L_chain-1m6vG16 G:558-669                                                                                ----CPSase_L_D2-1m6vG04 G:674-877                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1m6vG24 G:956-1042                                                                 ------------------------------- Pfam domains (4)
           Pfam domains (5) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1m6vG17 G:558-669                                                                                ----CPSase_L_D2-1m6vG05 G:674-877                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1m6vG18 G:558-669                                                                                ----CPSase_L_D2-1m6vG06 G:674-877                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1m6vG19 G:558-669                                                                                ----CPSase_L_D2-1m6vG07 G:674-877                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1m6vG20 G:558-669                                                                                ----CPSase_L_D2-1m6vG08 G:674-877                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (8)
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhh.eee....hhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eee.hhhhhhhhhhhhhhhh....eeeee.....eeeeeeeee.....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeeeee...hhhhhhhhhhhh.hhhhhhhhhhh..hhhhh.hhhhh.............eeeeeee.hhhhh..............eeeeeee.hhhhhhhhhhhhh................hhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhhhhhhhhh....eeee............eeeeee..............eeeee.........hhhhhhhhhhhhhhhhhhh.eeeeee....hhhhh.....eeee...hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhhh..eeee..------..eee.hhhhhhhhhhhh--------.eeee.....eeeeeeeee....eeeeeeeee......hhhhh.eee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhhh.hhhhhh.........eeeeeeehhhhhh..............eeeeeee.hhhhhhhhhhhhh.......eeeeee.hhhhhhhhhhhhhhhhhh.eeeeeehhhhhhhhh.....eee.hhhhh..hhhhhhhh....eeee...hhhhhhhhhhhhhhhhhhh.eee.hhhhhhhhhhhh.........hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v G    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPS------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710      |  -   |   730       740|      750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      717    724              741      750                                                                                                                                                                                                                                                                                                                                   

Chain H from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vh1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vh2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vH01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vH02 H:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
           Pfam domains (1) -CPSase_sm_chain-1m6vH05 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH01 H:194-373                                                                                                                                                            ------- Pfam domains (1)
           Pfam domains (2) -CPSase_sm_chain-1m6vH06 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH02 H:194-373                                                                                                                                                            ------- Pfam domains (2)
           Pfam domains (3) -CPSase_sm_chain-1m6vH07 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH03 H:194-373                                                                                                                                                            ------- Pfam domains (3)
           Pfam domains (4) -CPSase_sm_chain-1m6vH08 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH04 H:194-373                                                                                                                                                            ------- Pfam domains (4)
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhh..eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeee......eeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

Chain H from PDB  Type:PROTEIN  Length:375
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1m6vh1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1m6vh2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1m6vH01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1m6vH02 H:152-379  [code=3.40.50.880, no name defined]                                                                                                                                                                              - CATH domains
           Pfam domains (1) -CPSase_sm_chain-1m6vH05 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH01 H:194-373                                                                                                                                                            ------- Pfam domains (1)
           Pfam domains (2) -CPSase_sm_chain-1m6vH06 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH02 H:194-373                                                                                                                                                            ------- Pfam domains (2)
           Pfam domains (3) -CPSase_sm_chain-1m6vH07 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH03 H:194-373                                                                                                                                                            ------- Pfam domains (3)
           Pfam domains (4) -CPSase_sm_chain-1m6vH08 H:3-133                                                                                                    ------------------------------------------------------------GATase-1m6vH04 H:194-373                                                                                                                                                            ------- Pfam domains (4)
         Sec.struct. author ..eeeeee....eeeeee....eeeeeeeeee....hhhhhhhhhhhh.eeeee..........hhhhh........eee...............hhhhhhhhh..eeee..hhhhhhhhhhhhh.eeeeeee....hhhhhhhhhhhh.......hhhhhh....eee...............hhhhh.eeeeee....hhhhhhhhhh..eeeeee....hhhhhhh....eeee.........hhhhhhhhhhhh.....eeeehhhhhhhhhhh...eeeeeeeeeeeeeeee......eeeeeeeeeeee........eeeeeee.....eeeeee....eeee........----hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m6v H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351      |  - |     371         
                                                                                                                                                                                                                                                                                                                                                                                              358  363                 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 32)

Asymmetric/Biological Unit

(-) CATH Domains  (7, 40)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
1a1m6vA06A:664-686,A:757-936
1b1m6vC06C:664-686,C:757-936
1c1m6vE06E:664-686,E:757-936
1d1m6vG06G:664-686,G:757-936
1e1m6vA02A:117-140,A:211-403
1f1m6vC02C:117-140,C:211-403
1g1m6vE02E:117-140,E:211-403
1h1m6vG02G:117-140,G:211-403
2a1m6vA03A:141-210
2b1m6vC03C:141-210
2c1m6vE03E:141-210
2d1m6vG03G:141-210
2e1m6vA07A:687-756
2f1m6vC07C:687-756
2g1m6vE07E:687-756
2h1m6vG07G:687-756

(-) Pfam Domains  (6, 32)

Asymmetric/Biological Unit
(-)
Family: GATase (26)
2aGATase-1m6vH01H:194-373
2bGATase-1m6vH02H:194-373
2cGATase-1m6vH03H:194-373
2dGATase-1m6vH04H:194-373
(-)
Family: MGS (13)
6aMGS-1m6vG21G:956-1042
6bMGS-1m6vG22G:956-1042
6cMGS-1m6vG23G:956-1042
6dMGS-1m6vG24G:956-1042

(-) Gene Ontology  (21, 43)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,C,E,G   (CARB_ECOLI | P00968)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004087    carbamoyl-phosphate synthase (ammonia) activity    Catalysis of the reaction: 2 ATP + CO(2) + H(2)O + NH(4)(+) = 2 ADP + carbamoyl phosphate + 5 H(+) + phosphate.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0019856    pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (CARA_ECOLI | P0A6F1)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (CARA_ECO57 | P0A6F2)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CARA_ECO57 | P0A6F21a9x 1c30 1c3o 1cs0 1jdb 1kee 1t36
        CARA_ECOLI | P0A6F11a9x 1bxr 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1t36
        CARB_ECOLI | P009681a9x 1bxr 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1t36

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1M6V)