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(-) Description

Title :  STRUCTURE OF CARBAMOYL PHOSPHATE SYNTHETASE COMPLEXED WITH THE ATP ANALOG AMPPNP
 
Authors :  J. B. Thoden, G. Wesenberg, F. M. Raushel, H. M. Holden
Date :  08 Oct 98  (Deposition) - 20 Apr 99  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D,E,F,G,H  (1x)
Biol. Unit 2:  E,F  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  A,B  (1x)
Biol. Unit 5:  G,H  (1x)
Keywords :  Amidotransferase, Carbamoyl-Phosphate Synthase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. B. Thoden, G. Wesenberg, F. M. Raushel, H. M. Holden
Carbamoyl Phosphate Synthetase: Closure Of The B-Domain As Result Of Nucleotide Binding.
Biochemistry V. 38 2347 1999
PubMed-ID: 10029528  |  Reference-DOI: 10.1021/BI982517H

(-) Compounds

Molecule 1 - CARBAMOYL-PHOSPHATE SYNTHASE
    ChainsA, C, E, G
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562
 
Molecule 2 - CARBAMOYL-PHOSPHATE SYNTHASE
    ChainsB, D, F, H
    EC Number6.3.5.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)ABCDEFGH
Biological Unit 2 (1x)    EF  
Biological Unit 3 (1x)  CD    
Biological Unit 4 (1x)AB      
Biological Unit 5 (1x)      GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 62)

Asymmetric Unit (6, 62)
No.NameCountTypeFull Name
1ANP8Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL14Ligand/IonCHLORIDE ION
3K19Ligand/IonPOTASSIUM ION
4MN13Ligand/IonMANGANESE (II) ION
5NET4Ligand/IonTETRAETHYLAMMONIUM ION
6ORN4Ligand/IonL-ORNITHINE
Biological Unit 1 (3, 16)
No.NameCountTypeFull Name
1ANP8Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL-1Ligand/IonCHLORIDE ION
3K-1Ligand/IonPOTASSIUM ION
4MN-1Ligand/IonMANGANESE (II) ION
5NET4Ligand/IonTETRAETHYLAMMONIUM ION
6ORN4Ligand/IonL-ORNITHINE
Biological Unit 2 (3, 4)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL-1Ligand/IonCHLORIDE ION
3K-1Ligand/IonPOTASSIUM ION
4MN-1Ligand/IonMANGANESE (II) ION
5NET1Ligand/IonTETRAETHYLAMMONIUM ION
6ORN1Ligand/IonL-ORNITHINE
Biological Unit 3 (3, 4)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL-1Ligand/IonCHLORIDE ION
3K-1Ligand/IonPOTASSIUM ION
4MN-1Ligand/IonMANGANESE (II) ION
5NET1Ligand/IonTETRAETHYLAMMONIUM ION
6ORN1Ligand/IonL-ORNITHINE
Biological Unit 4 (3, 4)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL-1Ligand/IonCHLORIDE ION
3K-1Ligand/IonPOTASSIUM ION
4MN-1Ligand/IonMANGANESE (II) ION
5NET1Ligand/IonTETRAETHYLAMMONIUM ION
6ORN1Ligand/IonL-ORNITHINE
Biological Unit 5 (3, 4)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL-1Ligand/IonCHLORIDE ION
3K-1Ligand/IonPOTASSIUM ION
4MN-1Ligand/IonMANGANESE (II) ION
5NET1Ligand/IonTETRAETHYLAMMONIUM ION
6ORN1Ligand/IonL-ORNITHINE

(-) Sites  (61, 61)

Asymmetric Unit (61, 61)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:299 , ASN A:301 , ANP A:1083 , HOH A:1393BINDING SITE FOR RESIDUE MN A 1074
02AC2SOFTWAREGLU A:215 , ASN A:236 , ASP A:238 , ALA A:239 , ILE A:242 , SER A:247BINDING SITE FOR RESIDUE K A 1075
03AC3SOFTWAREALA A:126 , GLU A:127 , GLU A:299 , MET A:300 , ASN A:301 , HOH A:1199 , HOH A:1200BINDING SITE FOR RESIDUE K A 1076
04AC4SOFTWAREGLN A:829 , GLU A:841 , ANP A:1084 , HOH A:1516BINDING SITE FOR RESIDUE MN A 1077
05AC5SOFTWAREGLU A:841 , ASN A:843 , ANP A:1084 , HOH A:1308BINDING SITE FOR RESIDUE MN A 1078
06AC6SOFTWAREGLU A:761 , HIS A:781 , GLU A:783 , GLN A:784 , VAL A:787 , SER A:792BINDING SITE FOR RESIDUE K A 1079
07AC7SOFTWAREASN A:371 , PHE A:900 , PRO A:901 , GLY A:902 , HOH A:1454BINDING SITE FOR RESIDUE CL A 1080
08AC8SOFTWARELYS A:475 , ASN A:485 , HOH A:1264BINDING SITE FOR RESIDUE CL A 1081
09AC9SOFTWAREGLU A:549 , ASP B:114 , HOH B:1007BINDING SITE FOR RESIDUE CL B 982
10BC1SOFTWAREASN A:289 , ASN A:292 , ARG A:294BINDING SITE FOR RESIDUE CL A 1082
11BC2SOFTWAREHIS B:16 , ASP B:112 , HOH B:1009 , HOH B:1010 , HOH B:1063BINDING SITE FOR RESIDUE K B 984
12BC3SOFTWAREGLU C:299 , ASN C:301 , ANP C:1900 , HOH C:4295BINDING SITE FOR RESIDUE MN C 1901
13BC4SOFTWAREGLU C:215 , ASN C:236 , ASP C:238 , ALA C:239 , ILE C:242 , SER C:247BINDING SITE FOR RESIDUE K C 1903
14BC5SOFTWAREALA C:126 , GLU C:127 , GLU C:299 , MET C:300 , HOH C:4100 , HOH C:4101BINDING SITE FOR RESIDUE K C 1904
15BC6SOFTWAREGLN C:829 , GLU C:841 , ANP C:1910 , HOH C:4420BINDING SITE FOR RESIDUE MN C 1911
16BC7SOFTWAREGLU C:841 , ASN C:843 , ANP C:1910 , HOH C:4209BINDING SITE FOR RESIDUE MN C 1912
17BC8SOFTWAREGLU C:761 , HIS C:781 , GLU C:783 , GLN C:784 , VAL C:787 , SER C:792BINDING SITE FOR RESIDUE K C 1913
18BC9SOFTWAREMET C:174 , NET C:1950 , HOH C:4293 , HOH C:4447 , HOH C:4450BINDING SITE FOR RESIDUE CL C 1980
19CC1SOFTWAREALA C:370 , ASN C:371 , PHE C:900 , PRO C:901 , GLY C:902BINDING SITE FOR RESIDUE CL C 1981
20CC2SOFTWAREGLU C:549 , HOH C:4183 , ASP D:114 , HOH D:1217 , HOH D:1218BINDING SITE FOR RESIDUE CL D 1982
21CC3SOFTWAREASN C:289 , ASN C:292 , ARG C:294BINDING SITE FOR RESIDUE CL C 1983
22CC4SOFTWAREHOH C:4183 , HIS D:16 , ASP D:112 , HOH D:1529BINDING SITE FOR RESIDUE K D 3984
23CC5SOFTWARETHR C:143 , ALA C:144 , HOH C:4027BINDING SITE FOR RESIDUE K C 3985
24CC6SOFTWAREHIS A:680 , HIS C:150 , GLU C:154 , HOH C:4314BINDING SITE FOR RESIDUE MN C 3986
25CC7SOFTWAREGLU E:299 , ASN E:301 , ANP E:2900 , HOH E:3292BINDING SITE FOR RESIDUE MN E 2901
26CC8SOFTWAREGLU E:215 , ASN E:236 , ASP E:238 , ALA E:239 , ILE E:242 , SER E:247BINDING SITE FOR RESIDUE K E 2903
27CC9SOFTWAREALA E:126 , GLU E:127 , GLU E:299 , MET E:300 , ASN E:301 , HOH E:3102 , HOH E:3103 , HOH E:3292BINDING SITE FOR RESIDUE K E 2904
28DC1SOFTWAREGLN E:829 , GLU E:841 , ANP E:2910BINDING SITE FOR RESIDUE MN E 2911
29DC2SOFTWAREVAL E:719 , GLU E:841 , ASN E:843 , ANP E:2910 , HOH E:3207BINDING SITE FOR RESIDUE MN E 2912
30DC3SOFTWAREGLU E:761 , HIS E:781 , GLU E:783 , GLN E:784 , VAL E:787 , SER E:792BINDING SITE FOR RESIDUE K E 2913
31DC4SOFTWAREALA E:15 , ILE E:18 , ALA E:23 , PHE E:26 , HOH E:2992BINDING SITE FOR RESIDUE CL E 2980
32DC5SOFTWARESER E:854BINDING SITE FOR RESIDUE CL E 2981
33DC6SOFTWAREASP E:84 , GLY E:112 , THR E:114 , HOH E:3451BINDING SITE FOR RESIDUE K E 2983
34DC7SOFTWAREGLU G:299 , ASN G:301 , ANP G:3900 , HOH G:4292BINDING SITE FOR RESIDUE MN G 3901
35DC8SOFTWAREGLU G:215 , ASN G:236 , ASP G:238 , ALA G:239 , ILE G:242 , SER G:247BINDING SITE FOR RESIDUE K G 3903
36DC9SOFTWAREALA G:126 , GLU G:127 , GLU G:299 , MET G:300 , ASN G:301 , HOH G:4105BINDING SITE FOR RESIDUE K G 3904
37EC1SOFTWAREGLN G:829 , GLU G:841 , ANP G:3910 , HOH G:4408BINDING SITE FOR RESIDUE MN G 3911
38EC2SOFTWAREVAL G:719 , GLU G:841 , ASN G:843 , ANP G:3910 , HOH G:4209BINDING SITE FOR RESIDUE MN G 3912
39EC3SOFTWAREGLU G:761 , HIS G:781 , GLU G:783 , GLN G:784 , VAL G:787 , SER G:792BINDING SITE FOR RESIDUE K G 3913
40EC4SOFTWAREALA G:370 , ASN G:371 , PRO G:901 , GLY G:902BINDING SITE FOR RESIDUE CL G 3980
41EC5SOFTWARELYS G:475BINDING SITE FOR RESIDUE CL G 3981
42EC6SOFTWARELYS G:941BINDING SITE FOR RESIDUE CL G 3982
43EC7SOFTWAREASN G:289 , ASN G:292BINDING SITE FOR RESIDUE CL G 3983
44EC8SOFTWAREHIS H:16 , ASP H:112 , HOH H:3529BINDING SITE FOR RESIDUE K H 3987
45EC9SOFTWARECYS G:551 , ASN G:554 , HOH G:4389 , HOH G:4390BINDING SITE FOR RESIDUE K G 3988
46FC1SOFTWAREARG A:129 , ARG A:169 , THR A:173 , MET A:174 , GLY A:175 , GLY A:176 , ASP A:207 , GLU A:208 , LEU A:210 , ILE A:211 , GLU A:215 , MET A:240 , GLY A:241 , ILE A:242 , HIS A:243 , THR A:244 , GLN A:285 , GLU A:299 , ASN A:301 , ARG A:303 , ARG A:306 , THR A:376 , MN A:1074 , HOH A:1132 , HOH A:1441 , HOH A:1557BINDING SITE FOR RESIDUE ANP A 1083
47FC2SOFTWAREARG A:675 , ARG A:715 , VAL A:719 , LEU A:720 , GLY A:721 , GLY A:722 , MET A:725 , ASP A:753 , HIS A:754 , PHE A:755 , LEU A:756 , GLU A:761 , ALA A:785 , GLY A:786 , VAL A:787 , HIS A:788 , SER A:789 , GLN A:829 , GLU A:841 , ASN A:843 , ARG A:845 , ARG A:848 , PRO A:909 , MN A:1077 , MN A:1078 , HOH A:1308 , HOH A:1516 , HOH A:1730BINDING SITE FOR RESIDUE ANP A 1084
48FC3SOFTWAREGLU A:783 , ASP A:791 , ALA A:793 , GLU A:892 , LEU A:907 , TYR A:1040 , ASP A:1041 , THR A:1042 , HOH A:1345 , HOH A:1362BINDING SITE FOR RESIDUE ORN A 1085
49FC4SOFTWAREGLN A:22 , GLN A:93 , THR A:94 , ASN A:936BINDING SITE FOR RESIDUE NET A 1086
50FC5SOFTWAREARG C:129 , ILE C:167 , ARG C:169 , MET C:174 , GLY C:175 , GLY C:176 , GLU C:208 , SER C:209 , LEU C:210 , ILE C:211 , GLU C:215 , MET C:240 , GLY C:241 , ILE C:242 , HIS C:243 , THR C:244 , GLN C:285 , GLU C:299 , ASN C:301 , ARG C:303 , ARG C:306 , THR C:376 , MN C:1901 , HOH C:4031 , HOH C:4295BINDING SITE FOR RESIDUE ANP C 1900
51FC6SOFTWAREARG C:675 , ARG C:715 , VAL C:719 , LEU C:720 , GLY C:721 , GLY C:722 , MET C:725 , ASP C:753 , HIS C:754 , PHE C:755 , LEU C:756 , GLU C:761 , GLY C:786 , VAL C:787 , HIS C:788 , SER C:789 , GLN C:829 , GLU C:841 , ASN C:843 , ARG C:845 , ARG C:848 , PRO C:909 , MN C:1911 , MN C:1912 , HOH C:4420BINDING SITE FOR RESIDUE ANP C 1910
52FC7SOFTWAREGLU C:783 , ASP C:791 , GLU C:892 , VAL C:893 , LEU C:907 , TYR C:1040 , ASP C:1041 , THR C:1042 , HOH C:4246 , HOH C:4263BINDING SITE FOR RESIDUE ORN C 1920
53FC8SOFTWAREGLN C:22 , THR C:94 , ASN C:936 , CL C:1980 , HOH C:4000BINDING SITE FOR RESIDUE NET C 1950
54FC9SOFTWAREARG E:129 , ARG E:169 , THR E:173 , MET E:174 , GLY E:175 , GLY E:176 , GLU E:208 , LEU E:210 , ILE E:211 , GLU E:215 , MET E:240 , GLY E:241 , ILE E:242 , HIS E:243 , THR E:244 , GLN E:285 , GLU E:299 , ASN E:301 , ARG E:303 , ARG E:306 , THR E:376 , MN E:2901 , HOH E:3033 , HOH E:3341BINDING SITE FOR RESIDUE ANP E 2900
55GC1SOFTWAREARG E:675 , ARG E:715 , VAL E:719 , LEU E:720 , GLY E:721 , GLY E:722 , MET E:725 , ASP E:753 , HIS E:754 , PHE E:755 , LEU E:756 , GLU E:761 , ALA E:785 , GLY E:786 , VAL E:787 , HIS E:788 , SER E:789 , GLN E:829 , GLU E:841 , ASN E:843 , ARG E:845 , ARG E:848 , MN E:2911 , MN E:2912 , HOH E:3414BINDING SITE FOR RESIDUE ANP E 2910
56GC2SOFTWAREGLU E:783 , ASP E:791 , GLU E:892 , LEU E:907 , TYR E:1040 , ASP E:1041 , THR E:1042 , HOH E:3244 , HOH E:3261BINDING SITE FOR RESIDUE ORN E 2920
57GC3SOFTWAREGLN E:22 , THR E:94 , ASN E:936BINDING SITE FOR RESIDUE NET E 2950
58GC4SOFTWAREARG G:129 , ILE G:167 , ARG G:169 , THR G:173 , MET G:174 , GLY G:175 , GLY G:176 , GLU G:208 , LEU G:210 , ILE G:211 , GLU G:215 , MET G:240 , GLY G:241 , ILE G:242 , HIS G:243 , THR G:244 , GLN G:285 , GLU G:299 , ASN G:301 , ARG G:303 , ARG G:306 , THR G:376 , MN G:3901 , HOH G:4037 , HOH G:4292 , HOH G:4338BINDING SITE FOR RESIDUE ANP G 3900
59GC5SOFTWAREARG G:675 , ARG G:715 , VAL G:719 , LEU G:720 , GLY G:721 , GLY G:722 , MET G:725 , ASP G:753 , HIS G:754 , PHE G:755 , LEU G:756 , GLU G:761 , ALA G:785 , GLY G:786 , VAL G:787 , HIS G:788 , SER G:789 , GLN G:829 , ILE G:840 , GLU G:841 , ASN G:843 , ARG G:845 , ARG G:848 , MN G:3911 , MN G:3912 , HOH G:4408BINDING SITE FOR RESIDUE ANP G 3910
60GC6SOFTWAREGLU G:783 , ASP G:791 , GLU G:892 , LEU G:907 , TYR G:1040 , ASP G:1041 , THR G:1042 , HOH G:4245BINDING SITE FOR RESIDUE ORN G 3920
61GC7SOFTWAREGLN G:22 , THR G:94 , ASN G:97 , ASN G:936 , HOH G:4005 , HOH G:4270BINDING SITE FOR RESIDUE NET G 3950

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1BXR)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Phe A:164 -Pro A:165
2Ala A:251 -Pro A:252
3Tyr A:710 -Pro A:711
4Leu A:796 -Pro A:797
5Arg A:998 -Pro A:999
6Ser B:357 -Pro B:358
7Phe C:164 -Pro C:165
8Ala C:251 -Pro C:252
9Tyr C:710 -Pro C:711
10Leu C:796 -Pro C:797
11Arg C:998 -Pro C:999
12Ser D:357 -Pro D:358
13Phe E:164 -Pro E:165
14Ala E:251 -Pro E:252
15Tyr E:710 -Pro E:711
16Leu E:796 -Pro E:797
17Arg E:998 -Pro E:999
18Ser F:357 -Pro F:358
19Phe G:164 -Pro G:165
20Ala G:251 -Pro G:252
21Tyr G:710 -Pro G:711
22Leu G:796 -Pro G:797
23Arg G:998 -Pro G:999
24Ser H:357 -Pro H:358

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1BXR)

(-) PROSITE Motifs  (2, 16)

Asymmetric Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846
Biological Unit 1 (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8A:164-178
C:164-178
E:164-178
G:164-178
A:710-724
C:710-724
E:710-724
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8A:297-304
C:297-304
E:297-304
G:297-304
A:839-846
C:839-846
E:839-846
G:839-846
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
-
E:164-178
-
-
-
E:710-724
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
-
E:297-304
-
-
-
E:839-846
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
C:164-178
-
-
-
C:710-724
-
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
C:297-304
-
-
-
C:839-846
-
-
Biological Unit 4 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2A:164-178
-
-
-
A:710-724
-
-
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2A:297-304
-
-
-
A:839-846
-
-
-
Biological Unit 5 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
-
-
G:164-178
-
-
-
G:710-724
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
-
-
G:297-304
-
-
-
G:839-846

(-) Exons   (0, 0)

(no "Exon" information available for 1BXR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:1073
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1bxra3 A:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1bxra5 A:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1bxra1 A:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1bxra4 A:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1bxra6 A:677-935 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                          d1bxra2 A:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1bxrA01 A:1-116  [code=3.40.50.20, no name defined]                                                                 1bxrA02                 1bxrA03 A:141-210 ATP-grasp fold, A domain                            1bxrA02 A:117-140,A:211-403 ATP-grasp fold, B domain                                                                                                                                             1bxrA04 A:404-523 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                     1bxrA05 A:524-663  [code=3.40.50.20, no name defined]                                                                                       1bxrA06                1bxrA07 A:687-756 ATP-grasp fold, A domain                            1bxrA06 A:664-686,A:757-936 ATP-grasp fold, B domain                                                                                                                                1bxrA08 A:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee...........hhhhhhhhhhhhhhhh..eeeee...............eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh..hhhhh..eee...hhhhhhhh.hhhhhhhhhhh......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeee......eeeeeeeee.....eeeeeeee.............eee......hhhhhhhhhhhhhhhhhh....eeeeeeeeee....eeeeeeee....hhhhhhhhhh...hhhhhhhhhh.........hhh..............eeeeeee..hhh...............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhhh...hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhhh....hhhhhhhhhhh....eeee..............eeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeeee..............eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeee..........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhh....hhhh..........eeeeeeee.hhh.............eeeeeeeee..hhhhhhhhhhh.........eeeee..hhhh.hhhhhhhhhhhh..eeee.hhhhhhhhhh................hhhhhh.....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr A    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   

Chain B from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1bxrb1 B:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1bxrb2 B:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1bxrB01 B:2-151  [code=3.50.30.20, no name defined]                                                                                                   1bxrB02 B:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh..........hhhhhhhhhhh..eeeeeee.....hhhhhhhhh..........hhhh.....eee................hhh..eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhh......eeee.hhhhhhhh....eeee....eee..eeeee....eeeee.eee.eeeehhh....eeeeeee.......eeee....eeee...........hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr B    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain C from PDB  Type:PROTEIN  Length:1073
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1bxrc3 C:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1bxrc5 C:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1bxrc1 C:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1bxrc4 C:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1bxrc6 C:677-935 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                          d1bxrc2 C:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -------1bxrC01 C:8-118  [code=3.40.50.20, no name defined]                                                            ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrC03 C:404-523 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                     1bxrC04 C:524-664  [code=3.40.50.20, no name defined]                                                                                        --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrC06 C:937-1055  [code=3.40.50.1380, no name defined]                                                               ------------------ CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhh....eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh....hhh..eee...hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeee......eeeeeee....hhhhhhhhhh...hhhhhhhhhh...hhh....................eeeeeee..hhh...............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhh..hhhhhhhhhh...hhhhhhh....hhhhhhhhhhh....eeee..............eeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh......eee.....hhhhhhhhhhh...eee.....hhhhhhhhhhhhh........hhhhhhhh.hhhhhhhhhhh.......eee..hhhhhhhhhhh...eeee..........eee...hhhhhhhhhhhh......eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhhh...hhhh..........eeeeeeee.hhh.............eeeeeeeee..hhhhhhhhhhh........eeeeee..hhhh.hhhhhhhhhhh..eeeeeehhhhhhhhhh....eee.........hhhhhhh....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr C    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   

Chain D from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1bxrd1 D:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1bxrd2 D:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1bxrD01 D:2-151  [code=3.50.30.20, no name defined]                                                                                                   1bxrD02 D:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee................hhh..eeeeee.....hhhhhhhhh..eeeeee.....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeeehhhhhhhhhhh..eeee....eee..eeeee....eeeee.eee.eeeehhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr D    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain E from PDB  Type:PROTEIN  Length:1073
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1bxre3 E:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1bxre5 E:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1bxre1 E:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1bxre4 E:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1bxre6 E:677-935 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                          d1bxre2 E:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains -------1bxrE01 E:8-116  [code=3.40.50.20, no name defined]                                                          ------------------------1bxrE03 E:141-210 ATP-grasp fold, A domain                            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrE04 E:404-523 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                     1bxrE05 E:524-663  [code=3.40.50.20, no name defined]                                                                                       -----------------------1bxrE07 E:687-756 ATP-grasp fold, A domain                            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrE08 E:938-1056  [code=3.40.50.1380, no name defined]                                                               ----------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh..hhhhh..eee...hhhhhhhh.hhhhhhhhhhh......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeee......eeeeeee....hhhhhhhhhh...hhhhhhhhhh..........................eeeeeee..hhh...............eeeeeee..hhhhhhhhhhh.................hhhhhhhhhhh.....hhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhh..hhhhhhhh.....hhhhhhhh...hhhhhhhhhh.....eeee..............eeee..............eeeee..........hhhhhhhhhhhhhhhhh..eeeeee.........hhh..eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhhh......eeee..hhhhhhhhhhh...eeee..........eee..hhhhh..hhhhhh......eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeee....eeeeeee......hhhhhhhh...hhhhhhhhhh...hhhh..........eeeeeeee.................eeeeeeeee..hhhhhhhhhhh........eeeeee...hhh..hhhhhhhhhh..eeeeeehhhhhhhhhh....eee.........hhhhhh.....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr E    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   

Chain F from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1bxrf1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1bxrf2 F:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1bxrF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1bxrF02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee................hhh..eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhhh....eeee.hhhhhhhhhh..eeee....eee..eeeee....eeeee.eee.eeee.......eeeeeee.......eeee....eeee.............hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain G from PDB  Type:PROTEIN  Length:1073
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1bxrg3 G:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1bxrg5 G:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1bxrg1 G:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1bxrg4 G:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1bxrg6 G:677-935 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                          d1bxrg2 G:936-1073 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                             SCOP domains
               CATH domains 1bxrG01 G:1-116  [code=3.40.50.20, no name defined]                                                                 ------------------------1bxrG03 G:141-210 ATP-grasp fold, A domain                            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrG04 G:404-523 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                     1bxrG05 G:524-663  [code=3.40.50.20, no name defined]                                                                                       -----------------------1bxrG07 G:687-756 ATP-grasp fold, A domain                            ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1bxrG08 G:937-1042  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhhh.hhhh...eee...hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhh....eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeeee....eeeeeeee....hhhhhhhhhh...hhhhhhhhhh.........hhh..............eeeeeee..hhh...............eeeeeee..hhhhhhhhhhhh.................hhhhhhhhhh.....hhhhhhhhhhh...hhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhh..hhhhhhhhh....hhhhhhhh...hhhhhhhhhhh....eeee............eeeeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeeee..............eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhhh........hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeee..........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhhh...hhhh..........eeeeeeeehhhh.............eeeeeeeee..hhhhhhhhhhh........eeeeee..hhhh..hhhhhhhhhh..eeeeeehhhhhhhhhh....eee.........hhhhhh.....eeee....hhhhh..hhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr G    1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   

Chain H from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1bxrh1 H:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1bxrh2 H:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1bxrH01 H:2-151  [code=3.50.30.20, no name defined]                                                                                                   1bxrH02 H:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee................hhh..eeeeee.....hhhhhhhhhh.eeeeee.....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeee.hhhhhhhh.....eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1bxr H    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 32)

Asymmetric Unit

(-) CATH Domains  (7, 32)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1BXR)

(-) Gene Ontology  (21, 33)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (CARB_ECOLI | P00968)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004087    carbamoyl-phosphate synthase (ammonia) activity    Catalysis of the reaction: 2 ATP + CO(2) + H(2)O + NH(4)(+) = 2 ADP + carbamoyl phosphate + 5 H(+) + phosphate.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0019856    pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain B,D,F,H   (CARA_ECOLI | P0A6F1)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CARA_ECOLI | P0A6F11a9x 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1m6v 1t36
        CARB_ECOLI | P009681a9x 1c30 1c3o 1ce8 1cs0 1jdb 1kee 1m6v 1t36

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1BXR)