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(-) Description

Title :  CARBAMOYL PHOSPHATE SYNTHETASE FROM ESCHERICHIA COLI
 
Authors :  J. B. Thoden, H. M. Holden, G. Wesenberg, F. M. Raushel, I. Rayment
Date :  25 Mar 97  (Deposition) - 17 Jun 98  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  B,C,E,F,H,I,K,L
Biol. Unit 1:  B,C,E,F,H,I,K,L  (1x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  H,I  (1x)
Biol. Unit 4:  K,L  (1x)
Biol. Unit 5:  E,F  (1x)
Keywords :  Ligase, Amidotransferase, Synthase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. B. Thoden, F. M. Raushel, M. M. Benning, I. Rayment, H. M. Holden
The Structure Of Carbamoyl Phosphate Synthetase Determined To 2. 1 A Resolution.
Acta Crystallogr. , Sect. D V. 55 8 1999
PubMed-ID: 10089390  |  Reference-DOI: 10.1107/S0907444998006234
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CARBAMOYL PHOSPHATE SYNTHETASE
    ChainsB, E, H, K
    EC Number6.3.5.5
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562
 
Molecule 2 - CARBAMOYL PHOSPHATE SYNTHETASE
    ChainsC, F, I, L
    EC Number6.3.5.5
    Organism ScientificESCHERICHIA COLI
    Organism Taxid562

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit BCEFHIKL
Biological Unit 1 (1x)BCEFHIKL
Biological Unit 2 (1x)BC      
Biological Unit 3 (1x)    HI  
Biological Unit 4 (1x)      KL
Biological Unit 5 (1x)  EF    

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 107)

Asymmetric Unit (8, 107)
No.NameCountTypeFull Name
1ADP8Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL29Ligand/IonCHLORIDE ION
3GLN8Mod. Amino AcidGLUTAMINE
4K29Ligand/IonPOTASSIUM ION
5MN16Ligand/IonMANGANESE (II) ION
6NET4Ligand/IonTETRAETHYLAMMONIUM ION
7ORN4Ligand/IonL-ORNITHINE
8PO49Ligand/IonPHOSPHATE ION
Biological Unit 1 (5, 33)
No.NameCountTypeFull Name
1ADP8Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL-1Ligand/IonCHLORIDE ION
3GLN8Mod. Amino AcidGLUTAMINE
4K-1Ligand/IonPOTASSIUM ION
5MN-1Ligand/IonMANGANESE (II) ION
6NET4Ligand/IonTETRAETHYLAMMONIUM ION
7ORN4Ligand/IonL-ORNITHINE
8PO49Ligand/IonPHOSPHATE ION
Biological Unit 2 (5, 8)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL-1Ligand/IonCHLORIDE ION
3GLN2Mod. Amino AcidGLUTAMINE
4K-1Ligand/IonPOTASSIUM ION
5MN-1Ligand/IonMANGANESE (II) ION
6NET1Ligand/IonTETRAETHYLAMMONIUM ION
7ORN1Ligand/IonL-ORNITHINE
8PO42Ligand/IonPHOSPHATE ION
Biological Unit 3 (5, 8)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL-1Ligand/IonCHLORIDE ION
3GLN2Mod. Amino AcidGLUTAMINE
4K-1Ligand/IonPOTASSIUM ION
5MN-1Ligand/IonMANGANESE (II) ION
6NET1Ligand/IonTETRAETHYLAMMONIUM ION
7ORN1Ligand/IonL-ORNITHINE
8PO42Ligand/IonPHOSPHATE ION
Biological Unit 4 (5, 9)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL-1Ligand/IonCHLORIDE ION
3GLN2Mod. Amino AcidGLUTAMINE
4K-1Ligand/IonPOTASSIUM ION
5MN-1Ligand/IonMANGANESE (II) ION
6NET1Ligand/IonTETRAETHYLAMMONIUM ION
7ORN1Ligand/IonL-ORNITHINE
8PO43Ligand/IonPHOSPHATE ION
Biological Unit 5 (5, 8)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CL-1Ligand/IonCHLORIDE ION
3GLN2Mod. Amino AcidGLUTAMINE
4K-1Ligand/IonPOTASSIUM ION
5MN-1Ligand/IonMANGANESE (II) ION
6NET1Ligand/IonTETRAETHYLAMMONIUM ION
7ORN1Ligand/IonL-ORNITHINE
8PO42Ligand/IonPHOSPHATE ION

(-) Sites  (107, 107)

Asymmetric Unit (107, 107)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREMET B:173 , GLU B:298 , ASN B:300 , MN B:1074 , PO4 B:1078 , ADP B:1093 , HOH B:1097BINDING SITE FOR RESIDUE MN B 1073
002AC2SOFTWAREGLN B:284 , GLU B:298 , MN B:1073 , K B:1077 , PO4 B:1078 , ADP B:1093 , HOH B:1098BINDING SITE FOR RESIDUE MN B 1074
003AC3SOFTWAREGLU B:214 , ASN B:235 , ASP B:237 , ALA B:238 , ILE B:241 , SER B:246BINDING SITE FOR RESIDUE K B 1075
004AC4SOFTWAREALA B:125 , GLU B:126 , GLU B:298 , MET B:299 , ASN B:300 , HOH B:1097 , HOH B:1100 , HOH B:1105BINDING SITE FOR RESIDUE K B 1076
005AC5SOFTWAREGLU B:216 , THR B:243 , ASN B:282 , GLN B:284 , MN B:1074 , PO4 B:1078BINDING SITE FOR RESIDUE K B 1077
006AC6SOFTWAREMET B:173 , GLY B:174 , HIS B:242 , GLN B:284 , GLU B:298 , ASN B:300 , ARG B:302 , ARG B:305 , MN B:1073 , MN B:1074 , K B:1077 , ADP B:1093 , HOH B:1099 , HOH B:1106BINDING SITE FOR RESIDUE PO4 B 1078
007AC7SOFTWAREGLN B:828 , GLU B:840 , ADP B:1094 , HOH B:1107 , HOH B:1108BINDING SITE FOR RESIDUE MN B 1079
008AC8SOFTWAREGLU B:840 , ASN B:842 , ADP B:1094 , HOH B:1109BINDING SITE FOR RESIDUE MN B 1080
009AC9SOFTWAREGLU B:760 , HIS B:780 , GLU B:782 , GLN B:783 , VAL B:786 , SER B:791BINDING SITE FOR RESIDUE K B 1081
010BC1SOFTWARESER B:947 , VAL B:948 , LYS B:953 , THR B:973 , GLY B:975 , THR B:976 , LYS B:992 , GLN B:1091BINDING SITE FOR RESIDUE PO4 B 1082
011BC2SOFTWARETHR B:142 , ALA B:143 , HOH B:1272 , HOH B:1275BINDING SITE FOR RESIDUE K B 1083
012BC3SOFTWAREHIS C:16 , ASP C:112 , HOH C:433 , HOH C:434 , HOH C:435BINDING SITE FOR RESIDUE K C 383
013BC4SOFTWAREASP B:83 , GLY B:111 , THR B:113BINDING SITE FOR RESIDUE K B 1084
014BC5SOFTWAREASN B:288 , ASN B:291 , ARG B:293BINDING SITE FOR RESIDUE CL B 1085
015BC6SOFTWAREALA B:369 , ASN B:370 , PHE B:899 , PRO B:900 , GLY B:901BINDING SITE FOR RESIDUE CL B 1086
016BC7SOFTWAREGLN B:92 , THR B:172 , MET B:173 , HOH B:1149BINDING SITE FOR RESIDUE CL B 1087
017BC8SOFTWARETRP B:70BINDING SITE FOR RESIDUE CL B 1088
018BC9SOFTWAREASP C:114 , HOH C:434BINDING SITE FOR RESIDUE CL C 384
019CC1SOFTWARELYS B:474 , ASN B:484BINDING SITE FOR RESIDUE CL B 1089
020CC2SOFTWAREARG B:844 , ALA B:846 , ARG B:847BINDING SITE FOR RESIDUE CL B 1090
021CC3SOFTWAREGLU E:298 , ASN E:300 , MN E:1074 , PO4 E:1078 , ADP E:1095 , HOH E:1215BINDING SITE FOR RESIDUE MN E 1073
022CC4SOFTWAREGLN E:284 , GLU E:298 , MN E:1073 , K E:1077 , PO4 E:1078 , ADP E:1095 , HOH E:1216BINDING SITE FOR RESIDUE MN E 1074
023CC5SOFTWAREGLU E:214 , ASN E:235 , ASP E:237 , ALA E:238 , ILE E:241 , SER E:246BINDING SITE FOR RESIDUE K E 1075
024CC6SOFTWAREALA E:125 , GLU E:126 , GLU E:298 , MET E:299 , ASN E:300 , HOH E:1218 , HOH E:1223BINDING SITE FOR RESIDUE K E 1076
025CC7SOFTWAREGLU E:216 , THR E:243 , ASN E:282 , GLN E:284 , MN E:1074 , PO4 E:1078 , HOH E:1217BINDING SITE FOR RESIDUE K E 1077
026CC8SOFTWAREMET E:173 , GLY E:174 , HIS E:242 , GLN E:284 , GLU E:298 , ASN E:300 , ARG E:302 , ARG E:305 , MN E:1073 , MN E:1074 , K E:1077 , ADP E:1095 , HOH E:1217 , HOH E:1224BINDING SITE FOR RESIDUE PO4 E 1078
027CC9SOFTWAREGLN E:828 , GLU E:840 , ADP E:1096 , HOH E:1225 , HOH E:1226BINDING SITE FOR RESIDUE MN E 1079
028DC1SOFTWAREGLU E:840 , ASN E:842 , ADP E:1096 , HOH E:1227BINDING SITE FOR RESIDUE MN E 1080
029DC2SOFTWAREGLU E:760 , HIS E:780 , GLU E:782 , GLN E:783 , VAL E:786 , SER E:791BINDING SITE FOR RESIDUE K E 1081
030DC3SOFTWARESER E:947 , LYS E:953 , THR E:973 , GLY E:975 , THR E:976 , LYS E:992 , GLN E:1093 , HOH E:1236BINDING SITE FOR RESIDUE PO4 E 1082
031DC4SOFTWARETHR E:142 , ALA E:143 , HOH E:1387 , HOH E:1389 , HOH E:1390BINDING SITE FOR RESIDUE K E 1083
032DC5SOFTWAREHIS F:16 , ASP F:112 , HOH F:1809BINDING SITE FOR RESIDUE K F 383
033DC6SOFTWAREASP E:83 , GLY E:111 , THR E:113 , HOH E:2318BINDING SITE FOR RESIDUE K E 1084
034DC7SOFTWAREALA E:671 , GLU E:672 , GLU E:840 , VAL E:841 , ASN E:842BINDING SITE FOR RESIDUE K E 1085
035DC8SOFTWAREASN E:288 , ASN E:291 , ARG E:293BINDING SITE FOR RESIDUE CL E 1086
036DC9SOFTWAREALA E:369 , ASN E:370 , PHE E:899 , PRO E:900 , GLY E:901BINDING SITE FOR RESIDUE CL E 1087
037EC1SOFTWARETHR E:172 , MET E:173 , HOH E:1280 , HOH E:1340BINDING SITE FOR RESIDUE CL E 1088
038EC2SOFTWARETRP E:70BINDING SITE FOR RESIDUE CL E 1089
039EC3SOFTWAREPHE F:15 , ASP F:114BINDING SITE FOR RESIDUE CL F 384
040EC4SOFTWARELYS E:474 , ASN E:484 , HOH E:1708BINDING SITE FOR RESIDUE CL E 1090
041EC5SOFTWAREALA E:119 , HOH E:1347 , HOH E:1352BINDING SITE FOR RESIDUE CL E 1091
042EC6SOFTWAREPHE E:577 , ARG E:844 , ALA E:846 , ARG E:847BINDING SITE FOR RESIDUE CL E 1092
043EC7SOFTWAREGLU H:298 , ASN H:300 , MN H:1074 , PO4 H:1078 , ADP H:1092 , HOH H:1107BINDING SITE FOR RESIDUE MN H 1073
044EC8SOFTWAREGLN H:284 , GLU H:298 , MN H:1073 , K H:1077 , PO4 H:1078 , ADP H:1092 , HOH H:1108BINDING SITE FOR RESIDUE MN H 1074
045EC9SOFTWAREGLU H:214 , ASN H:235 , ASP H:237 , ALA H:238 , ILE H:241 , SER H:246BINDING SITE FOR RESIDUE K H 1075
046FC1SOFTWAREALA H:125 , GLU H:126 , GLU H:298 , MET H:299 , ASN H:300 , HOH H:1107 , HOH H:1110 , HOH H:1115BINDING SITE FOR RESIDUE K H 1076
047FC2SOFTWAREGLU H:216 , THR H:243 , ASN H:282 , GLN H:284 , MN H:1074 , PO4 H:1078 , HOH H:1109BINDING SITE FOR RESIDUE K H 1077
048FC3SOFTWAREMET H:173 , GLY H:174 , HIS H:242 , GLN H:284 , GLU H:298 , ASN H:300 , ARG H:302 , ARG H:305 , MN H:1073 , MN H:1074 , K H:1077 , ADP H:1092 , HOH H:1109 , HOH H:1116BINDING SITE FOR RESIDUE PO4 H 1078
049FC4SOFTWAREGLN H:828 , GLU H:840 , MN H:1080 , ADP H:1093 , HOH H:1117 , HOH H:1118BINDING SITE FOR RESIDUE MN H 1079
050FC5SOFTWAREGLU H:840 , ASN H:842 , MN H:1079 , ADP H:1093 , HOH H:1119BINDING SITE FOR RESIDUE MN H 1080
051FC6SOFTWAREGLU H:760 , HIS H:780 , GLU H:782 , GLN H:783 , VAL H:786 , SER H:791BINDING SITE FOR RESIDUE K H 1081
052FC7SOFTWARELYS H:953 , THR H:973 , GLY H:975 , THR H:976 , LYS H:992 , GLN H:1090BINDING SITE FOR RESIDUE PO4 H 1082
053FC8SOFTWARETHR H:142 , ALA H:143 , HOH H:1280 , HOH H:1282BINDING SITE FOR RESIDUE K H 1083
054FC9SOFTWAREHOH H:1654 , HIS I:16 , ASP I:112 , HOH I:3054BINDING SITE FOR RESIDUE K I 383
055GC1SOFTWAREASN H:288 , ASN H:291 , ARG H:293BINDING SITE FOR RESIDUE CL H 1084
056GC2SOFTWAREALA H:369 , ASN H:370 , PHE H:899 , PRO H:900 , GLY H:901BINDING SITE FOR RESIDUE CL H 1085
057GC3SOFTWARETHR H:172 , MET H:173 , HOH H:1170BINDING SITE FOR RESIDUE CL H 1086
058GC4SOFTWARETRP H:70BINDING SITE FOR RESIDUE CL H 1087
059GC5SOFTWAREPHE I:15 , ILE I:113 , ASP I:114BINDING SITE FOR RESIDUE CL I 384
060GC6SOFTWARELYS H:474 , ASN H:484BINDING SITE FOR RESIDUE CL H 1088
061GC7SOFTWAREPHE H:577 , ARG H:844 , ALA H:846 , ARG H:847BINDING SITE FOR RESIDUE CL H 1089
062GC8SOFTWAREGLU K:298 , ASN K:300 , MN K:1074 , PO4 K:1078 , ADP K:1095 , HOH K:1111BINDING SITE FOR RESIDUE MN K 1073
063GC9SOFTWAREGLN K:284 , GLU K:298 , MN K:1073 , K K:1077 , PO4 K:1078 , ADP K:1095 , HOH K:1112BINDING SITE FOR RESIDUE MN K 1074
064HC1SOFTWAREGLU K:214 , ASN K:235 , ASP K:237 , ALA K:238 , ILE K:241 , SER K:246BINDING SITE FOR RESIDUE K K 1075
065HC2SOFTWAREALA K:125 , GLU K:126 , GLU K:298 , MET K:299 , ASN K:300 , HOH K:1111 , HOH K:1114 , HOH K:1119BINDING SITE FOR RESIDUE K K 1076
066HC3SOFTWAREGLU K:216 , THR K:243 , ASN K:282 , GLN K:284 , MN K:1074 , PO4 K:1078 , HOH K:1113BINDING SITE FOR RESIDUE K K 1077
067HC4SOFTWAREMET K:173 , GLY K:174 , HIS K:242 , GLN K:284 , GLU K:298 , ASN K:300 , ARG K:302 , ARG K:305 , MN K:1073 , MN K:1074 , K K:1077 , ADP K:1095 , HOH K:1113 , HOH K:1120BINDING SITE FOR RESIDUE PO4 K 1078
068HC5SOFTWAREGLN K:828 , GLU K:840 , MN K:1080 , ADP K:1096 , HOH K:1121 , HOH K:1122BINDING SITE FOR RESIDUE MN K 1079
069HC6SOFTWAREGLU K:840 , ASN K:842 , MN K:1079 , ADP K:1096 , HOH K:1123BINDING SITE FOR RESIDUE MN K 1080
070HC7SOFTWAREGLU K:760 , HIS K:780 , GLU K:782 , GLN K:783 , VAL K:786 , SER K:791BINDING SITE FOR RESIDUE K K 1081
071HC8SOFTWARELYS K:953 , THR K:973 , GLY K:975 , THR K:976 , LYS K:992 , GLN K:1093 , HOH K:1130BINDING SITE FOR RESIDUE PO4 K 1082
072HC9SOFTWARETHR K:142 , ALA K:143 , HOH K:1289 , HOH K:1290BINDING SITE FOR RESIDUE K K 1083
073IC1SOFTWAREHIS L:16 , ASP L:112 , HOH L:4230BINDING SITE FOR RESIDUE K L 383
074IC2SOFTWAREGLU K:672 , GLU K:840 , VAL K:841 , ASN K:842BINDING SITE FOR RESIDUE K K 1084
075IC3SOFTWARECYS K:550 , ASN K:553 , HOH K:1589BINDING SITE FOR RESIDUE K K 1085
076IC4SOFTWAREASN K:288 , ASN K:291 , ARG K:293BINDING SITE FOR RESIDUE CL K 1086
077IC5SOFTWAREALA K:369 , ASN K:370 , PHE K:899 , PRO K:900 , GLY K:901BINDING SITE FOR RESIDUE CL K 1087
078IC6SOFTWARETHR K:172 , MET K:173 , NET K:1098 , HOH K:1175BINDING SITE FOR RESIDUE CL K 1088
079IC7SOFTWARETRP K:70BINDING SITE FOR RESIDUE CL K 1089
080IC8SOFTWAREPHE L:15 , ASP L:114BINDING SITE FOR RESIDUE CL L 384
081IC9SOFTWARELYS K:474 , ASN K:484 , HOH K:1568BINDING SITE FOR RESIDUE CL K 1090
082JC1SOFTWAREARG K:844 , ARG K:847BINDING SITE FOR RESIDUE CL K 1091
083JC2SOFTWAREGLU K:559 , TYR K:593BINDING SITE FOR RESIDUE PO4 K 1092
084JC3SOFTWAREASN B:1014 , THR B:1015 , THR B:1016 , ASP B:1024 , SER B:1025 , PO4 B:1082BINDING SITE FOR RESIDUE GLN B 1091
085JC4SOFTWAREARG B:527 , ALA B:536 , THR B:537 , GLU B:551 , ASN B:553 , HOH B:1117 , HOH B:1118 , HOH B:1120 , ARG C:120 , ARG C:123BINDING SITE FOR RESIDUE GLN B 1092
086JC5SOFTWAREVAL E:948 , ASN E:1014 , THR E:1015 , THR E:1016 , ASP E:1024 , SER E:1025 , ILE E:1028 , PO4 E:1082BINDING SITE FOR RESIDUE GLN E 1093
087JC6SOFTWAREARG E:527 , ALA E:536 , THR E:537 , GLU E:551 , ASN E:553 , HOH E:1239 , HOH E:1240 , ARG F:120 , ARG F:123BINDING SITE FOR RESIDUE GLN E 1094
088JC7SOFTWAREVAL H:948 , ASN H:1014 , THR H:1015 , THR H:1016 , ASP H:1024 , SER H:1025 , PO4 H:1082BINDING SITE FOR RESIDUE GLN H 1090
089JC8SOFTWAREARG H:527 , ALA H:536 , THR H:537 , GLU H:551 , ASN H:553 , HOH H:1128 , HOH H:1129 , ARG I:120 , ARG I:123BINDING SITE FOR RESIDUE GLN H 1091
090JC9SOFTWAREVAL K:948 , ASN K:1014 , THR K:1015 , THR K:1016 , ASP K:1024 , SER K:1025 , PO4 K:1082BINDING SITE FOR RESIDUE GLN K 1093
091KC1SOFTWAREARG K:527 , ALA K:536 , THR K:537 , GLU K:551 , ASN K:553 , HOH K:1131 , HOH K:1132 , HOH K:1134 , ARG L:120 , ARG L:123BINDING SITE FOR RESIDUE GLN K 1094
092KC2SOFTWAREARG B:128 , ILE B:166 , ARG B:168 , THR B:172 , MET B:173 , GLY B:174 , GLY B:175 , GLU B:207 , SER B:208 , LEU B:209 , ILE B:210 , GLU B:214 , MET B:239 , GLY B:240 , ILE B:241 , HIS B:242 , THR B:243 , GLN B:284 , ILE B:297 , GLU B:298 , THR B:375 , MN B:1073 , MN B:1074 , PO4 B:1078 , HOH B:1098 , HOH B:1102 , HOH B:1103 , HOH B:1104BINDING SITE FOR RESIDUE ADP B 1093
093KC3SOFTWAREPRO B:689 , ARG B:714 , MET B:724 , HIS B:753 , PHE B:754 , LEU B:755 , GLU B:760 , ALA B:784 , GLY B:785 , VAL B:786 , HIS B:787 , SER B:788 , GLN B:828 , GLU B:840 , MN B:1079 , MN B:1080 , HOH B:1107 , HOH B:1108 , HOH B:1109 , HOH B:1110BINDING SITE FOR RESIDUE ADP B 1094
094KC4SOFTWAREGLU B:782 , ASP B:790 , GLU B:891 , VAL B:892 , LEU B:906 , TYR B:1039 , ASP B:1040 , THR B:1041 , HOH B:1112 , HOH B:1114BINDING SITE FOR RESIDUE ORN B 1095
095KC5SOFTWARETHR B:93 , ASN B:935BINDING SITE FOR RESIDUE NET B 1096
096KC6SOFTWAREARG E:128 , ILE E:166 , ARG E:168 , THR E:172 , MET E:173 , GLY E:174 , GLY E:175 , GLU E:207 , LEU E:209 , ILE E:210 , GLU E:214 , MET E:239 , GLY E:240 , ILE E:241 , HIS E:242 , THR E:243 , GLN E:284 , ILE E:297 , GLU E:298 , THR E:375 , MN E:1073 , MN E:1074 , PO4 E:1078 , HOH E:1215 , HOH E:1216 , HOH E:1220 , HOH E:1222BINDING SITE FOR RESIDUE ADP E 1095
097KC7SOFTWAREPRO E:689 , ARG E:714 , MET E:724 , HIS E:753 , PHE E:754 , LEU E:755 , GLU E:760 , GLY E:785 , VAL E:786 , HIS E:787 , SER E:788 , GLN E:828 , GLU E:840 , MN E:1079 , MN E:1080 , HOH E:1225 , HOH E:1226 , HOH E:1228 , HOH E:1229 , HOH E:1230BINDING SITE FOR RESIDUE ADP E 1096
098KC8SOFTWAREGLU E:782 , ASP E:790 , ALA E:792 , GLU E:891 , LEU E:906 , TYR E:1039 , ASP E:1040 , THR E:1041 , HOH E:1232 , HOH E:1233 , HOH E:1234BINDING SITE FOR RESIDUE ORN E 1097
099KC9SOFTWARETHR E:93 , ASN E:96 , ASN E:935BINDING SITE FOR RESIDUE NET E 1098
100LC1SOFTWAREARG H:128 , ILE H:166 , ARG H:168 , THR H:172 , MET H:173 , GLY H:174 , GLY H:175 , GLU H:207 , LEU H:209 , ILE H:210 , GLU H:214 , MET H:239 , GLY H:240 , ILE H:241 , HIS H:242 , THR H:243 , GLN H:284 , ILE H:297 , GLU H:298 , THR H:375 , MN H:1073 , MN H:1074 , PO4 H:1078 , HOH H:1107 , HOH H:1108 , HOH H:1112 , HOH H:1113 , HOH H:1114BINDING SITE FOR RESIDUE ADP H 1092
101LC2SOFTWAREPRO H:689 , ARG H:714 , MET H:724 , HIS H:753 , PHE H:754 , LEU H:755 , GLU H:760 , ALA H:784 , GLY H:785 , VAL H:786 , HIS H:787 , SER H:788 , GLN H:828 , GLU H:840 , MN H:1079 , MN H:1080 , HOH H:1117 , HOH H:1118 , HOH H:1120 , HOH H:1121 , HOH H:1122BINDING SITE FOR RESIDUE ADP H 1093
102LC3SOFTWAREGLU H:782 , ASP H:790 , GLU H:891 , VAL H:892 , LEU H:906 , TYR H:1039 , ASP H:1040 , THR H:1041 , HOH H:1124 , HOH H:1126BINDING SITE FOR RESIDUE ORN H 1094
103LC4SOFTWAREGLN H:21 , THR H:93 , ASN H:96BINDING SITE FOR RESIDUE NET H 1095
104LC5SOFTWAREARG K:128 , ILE K:166 , ARG K:168 , THR K:172 , MET K:173 , GLY K:174 , GLY K:175 , GLU K:207 , LEU K:209 , ILE K:210 , GLU K:214 , MET K:239 , GLY K:240 , ILE K:241 , HIS K:242 , THR K:243 , GLN K:284 , ILE K:297 , GLU K:298 , THR K:375 , MN K:1073 , MN K:1074 , PO4 K:1078 , HOH K:1111 , HOH K:1112 , HOH K:1116 , HOH K:1118BINDING SITE FOR RESIDUE ADP K 1095
105LC6SOFTWAREPRO K:689 , ARG K:714 , HIS K:753 , PHE K:754 , LEU K:755 , GLU K:760 , ALA K:784 , GLY K:785 , VAL K:786 , HIS K:787 , SER K:788 , GLN K:828 , GLU K:840 , PRO K:908 , MN K:1079 , MN K:1080 , HOH K:1122 , HOH K:1123BINDING SITE FOR RESIDUE ADP K 1096
106LC7SOFTWAREGLU K:782 , ASP K:790 , GLU K:891 , LEU K:906 , TYR K:1039 , ASP K:1040 , THR K:1041 , HOH K:1126 , HOH K:1128BINDING SITE FOR RESIDUE ORN K 1097
107LC8SOFTWAREGLN K:21 , THR K:93 , CL K:1088BINDING SITE FOR RESIDUE NET K 1098

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1JDB)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Phe B:163 -Pro B:164
2Ala B:250 -Pro B:251
3Tyr B:709 -Pro B:710
4Leu B:795 -Pro B:796
5Arg B:997 -Pro B:998
6Ser C:357 -Pro C:358
7Phe E:163 -Pro E:164
8Ala E:250 -Pro E:251
9Tyr E:709 -Pro E:710
10Leu E:795 -Pro E:796
11Arg E:997 -Pro E:998
12Ser F:357 -Pro F:358
13Phe H:163 -Pro H:164
14Ala H:250 -Pro H:251
15Tyr H:709 -Pro H:710
16Leu H:795 -Pro H:796
17Arg H:997 -Pro H:998
18Ser I:357 -Pro I:358
19Phe K:163 -Pro K:164
20Ala K:250 -Pro K:251
21Tyr K:709 -Pro K:710
22Leu K:795 -Pro K:796
23Arg K:997 -Pro K:998
24Ser L:357 -Pro L:358

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1JDB)

(-) PROSITE Motifs  (2, 16)

Asymmetric Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8B:163-177
E:163-177
H:163-177
K:163-177
B:709-723
E:709-723
H:709-723
K:709-723
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8B:296-303
E:296-303
H:296-303
K:296-303
B:838-845
E:838-845
H:838-845
K:838-845
Biological Unit 1 (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  8B:163-177
E:163-177
H:163-177
K:163-177
B:709-723
E:709-723
H:709-723
K:709-723
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  8B:296-303
E:296-303
H:296-303
K:296-303
B:838-845
E:838-845
H:838-845
K:838-845
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2B:163-177
-
-
-
B:709-723
-
-
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2B:296-303
-
-
-
B:838-845
-
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
-
H:163-177
-
-
-
H:709-723
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
-
H:296-303
-
-
-
H:838-845
-
Biological Unit 4 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
-
-
K:163-177
-
-
-
K:709-723
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
-
-
K:296-303
-
-
-
K:838-845
Biological Unit 5 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CPSASE_1PS00866 Carbamoyl-phosphate synthase subdomain signature 1.CARB_ECOLI164-178
 
 
 
710-724
 
 
 
  2-
E:163-177
-
-
-
E:709-723
-
-
2CPSASE_2PS00867 Carbamoyl-phosphate synthase subdomain signature 2.CARB_ECOLI297-304
 
 
 
839-846
 
 
 
  2-
E:296-303
-
-
-
E:838-845
-
-

(-) Exons   (0, 0)

(no "Exon" information available for 1JDB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain B from PDB  Type:PROTEIN  Length:1057
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1jdbb3 B:0-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                        d1jdbb5 B:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1jdbb1 B:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1jdbb4 B:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1jdbb6 B:677-935 Carbamoyl phosphate         synthetase (CPS),         large subunit ATP-binding domains                                                                                                                                                          d1jdbb2 B:936-1072 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                            SCOP domains
               CATH domains -1jdbB01 B:1-115  [code=3.40.50.20, no name defined]                                                                1jdbB02                 1jdbB03 B:140-209 ATP-grasp fold, A domain                            1jdbB02 B:116-139,B:210-402 ATP-grasp fold, B domain                                                                                                                                             1jdbB04 B:403-552 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1jdbB05 B:553-662  [code=3.40.50.20, no name defined]                                                         1jdbB06                1jdbB07 B:686-755 ATP-grasp f        old, A domain                    1jdbB06 B:663-685,B:756-935 ATP-grasp fold, B domain                                                                                                                                1jdbB08 B:936-1041  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh..hhhh...eee...hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeee......eeeeeee....hhhhhhhhhh...hhhhhhhhhh.........hhh..............eeeeeee..hhhh..............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh...hhhhhhhh...hhhhhhhhhh.....eeee............eeeeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee.....hhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeee--------..eee..hhhhhhhhhh.--------eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhhh...hhhh..........eeeeeeeehhhh.............eeeeeeeee..hhhhhhhhhhh.........eeeee..hhhh.hhhhhhhhhhh...eeeeehhhhhhhhhh....eee.........hhhhhh.....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb B    0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVR--------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1072
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709    |    -   |   729       739|      749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    714      723              740      749                                                                                                                                                                                                                                                                                                                                   

Chain C from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbc1 C:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbc2 C:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbC01 C:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbC02 C:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeee.....hhhhhhhhhh.eeeeee.....hhhhh.....eeee..........hhhhhhhhhhhh...eeeee.hhhhhhhhh....eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee.............hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb C    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain C from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbc1 C:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbc2 C:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbC01 C:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbC02 C:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeee.....hhhhhhhhhh.eeeeee.....hhhhh.....eeee..........hhhhhhhhhhhh...eeeee.hhhhhhhhh....eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee.............hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb C    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain E from PDB  Type:PROTEIN  Length:1057
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains -d1jdbe3 E:1-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                       d1jdbe5 E:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1jdbe1 E:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1jdbe4 E:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1jdbe6 E:677-935 Carbamoyl phosphate         synthetase (CPS),         large subunit ATP-binding domains                                                                                                                                                          d1jdbe2 E:936-1072 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                            SCOP domains
               CATH domains -1jdbE01 E:1-115  [code=3.40.50.20, no name defined]                                                                1jdbE02                 1jdbE03 E:140-209 ATP-grasp fold, A domain                            1jdbE02 E:116-139,E:210-402 ATP-grasp fold, B domain                                                                                                                                             1jdbE04 E:403-552 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1jdbE05 E:553-662  [code=3.40.50.20, no name defined]                                                         1jdbE06                1jdbE07 E:686-755 ATP-grasp f        old, A domain                    1jdbE06 E:663-685,E:756-935 ATP-grasp fold, B domain                                                                                                                                1jdbE08 E:936-1041  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh..hhhh...eee...hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeeee....eeeeeeee....hhhhhhhhhh...hhhhhhhhh....hhh...hhh..............eeeeeee..hhh...............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh...hhhhhhhh...hhhhhhhhhh.....eeee..............eeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeeee.....hhh.hhh..eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhhh......eee...hhhhhhhhhhh...eee.--------..eee..hhhhhhhhhh.--------.eeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhh....eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhh....hhhh..........eeeeeeeehhhh.............eeeeeeeee..hhhhhhhhhhh.........eeeee..hhh..hhhhhhhhhhh...eeee.hhhhhhhhhh.........hhh....hhhhhh.....eeee....hhhhhh.hhhhhhhhh........hhhhhhhhhhhh.........hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb E    0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVR--------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1072
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709    |    -   |   729       739|      749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    714      723              740      749                                                                                                                                                                                                                                                                                                                                   

Chain F from PDB  Type:PROTEIN  Length:380
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA  381
               SCOP domains d1jdbf1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbf2 F:153-381 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                     SCOP domains
               CATH domains 1jdbF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbF02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                               - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee.......................eeee...............hhhhhhh....eee...hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhhh...eee....eee..eeeee....eeeee.eee.eee........eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA  381
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381

Chain F from PDB  Type:PROTEIN  Length:380
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA  381
               SCOP domains d1jdbf1 F:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbf2 F:153-381 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                     SCOP domains
               CATH domains 1jdbF01 F:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbF02 F:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                               - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee.......................eeee...............hhhhhhh....eee...hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhh.....eeeehhhhhhhhhhh...eee....eee..eeeee....eeeee.eee.eee........eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb F    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTA  381
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381

Chain H from PDB  Type:PROTEIN  Length:1057
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1jdbh3 H:0-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                        d1jdbh5 H:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1jdbh1 H:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1jdbh4 H:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1jdbh6 H:677-935 Carbamoyl phosphate         synthetase (CPS),         large subunit ATP-binding domains                                                                                                                                                          d1jdbh2 H:936-1072 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                            SCOP domains
               CATH domains -1jdbH01 H:1-115  [code=3.40.50.20, no name defined]                                                                1jdbH02                 1jdbH03 H:140-209 ATP-grasp fold, A domain                            1jdbH02 H:116-139,H:210-402 ATP-grasp fold, B domain                                                                                                                                             1jdbH04 H:403-552 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1jdbH05 H:553-662  [code=3.40.50.20, no name defined]                                                         1jdbH06                1jdbH07 H:686-755 ATP-grasp f        old, A domain                    1jdbH06 H:663-685,H:756-935 ATP-grasp fold, B domain                                                                                                                                1jdbH08 H:936-1041  [code=3.40.50.1380, no name defined]                                                  ------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhhh.hhhh...eee...hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeee......eeeeeee....hhhhhhhhhh...hhhhhhhhhh...hhh...hhh..............eeeeeee..hhh...............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhh..hhhhhhhhhh...hhhhhhhh...hhhhhhhhhh.....eeee..............eeee..............eeeee..........hhhhhhhhhhhhhhhh...eeeeee.....hhh.hhh..eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhh.........hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eee.--------..eee..hhhhhhhhhh.--------eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee......hhhhhhhh...hhhhhhhhhh...hhhh..........eeeeeeeehhhh.............eeeeeeeee..hhhhhhhhhhh.........eeeee..hhhh.hhhhhhhhhhh...eeeeehhhhhhhhh.....eee.........hhhhhh.....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb H    0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVR--------AMEIVYDEADLRRYFQTA--------VLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1072
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709    |    -   |   729       739|      749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    714      723              740      749                                                                                                                                                                                                                                                                                                                                   

Chain I from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbi1 I:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbi2 I:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbI01 I:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbI02 I:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeeee....hhhhhhhhh..eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeeehhhhhhhhhhh...eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb I    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain I from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbi1 I:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbi2 I:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbI01 I:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbI02 I:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee.....................eeeeeee....hhhhhhhhh..eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeeehhhhhhhhhhh...eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb I    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain K from PDB  Type:PROTEIN  Length:1060
 aligned with CARB_ECOLI | P00968 from UniProtKB/Swiss-Prot  Length:1073

    Alignment length:1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990      1000      1010      1020      1030      1040      1050      1060      1070   
          CARB_ECOLI      1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1073
               SCOP domains d1jdbk3 K:0-127 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                                        d1jdbk5 K:128-402 Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains                                                                                                                                                                                          d1jdbk1 K:403-555 Carbamoyl phosphate synthetase, large subunit connection domain                                                                        d1jdbk4 K:556-676 Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains                               d1jdbk6 K:677-935 Carbamoyl phosphate s       ynthetase (CPS), l      arge subunit ATP-binding domains                                                                                                                                                             d1jdbk2 K:936-1072 Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain                                            SCOP domains
               CATH domains -1jdbK01 K:1-115  [code=3.40.50.20, no name defined]                                                                1jdbK02                 1jdbK03 K:140-209 ATP-grasp fold, A domain                            1jdbK02 K:116-139,K:210-402 ATP-grasp fold, B domain                                                                                                                                             1jdbK04 K:403-552 Carbamoyl Phosphate Synthetase; Chain A, domain 4                                                                                   1jdbK05 K:553-662  [code=3.40.50.20, no name defined]                                                         1jdbK06                1jdbK07 K:686-755 ATP-grasp fo       ld, A domain                     1jdbK06 K:663-685,K:756-935 ATP-grasp fold, B domain                                                                                                                                1jdbK08 K:936-1034  [code=3.40.50.1380, no name defined]                                           -------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1jdbK09 K:423-546                                                                                               ----------CPSase_L_chain-1jdbK13 K:557-668                                                                                ----CPSase_L_D2-1jdbK01 K:673-876                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1jdbK21 K:955-1041                                                                 ------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1jdbK10 K:423-546                                                                                               ----------CPSase_L_chain-1jdbK14 K:557-668                                                                                ----CPSase_L_D2-1jdbK02 K:673-876                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1jdbK22 K:955-1041                                                                 ------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1jdbK11 K:423-546                                                                                               ----------CPSase_L_chain-1jdbK15 K:557-668                                                                                ----CPSase_L_D2-1jdbK03 K:673-876                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1jdbK23 K:955-1041                                                                 ------------------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_D3-1jdbK12 K:423-546                                                                                               ----------CPSase_L_chain-1jdbK16 K:557-668                                                                                ----CPSase_L_D2-1jdbK04 K:673-876                                                                                                                                                                               ------------------------------------------------------------------------------MGS-1jdbK24 K:955-1041                                                                 ------------------------------- Pfam domains (4)
           Pfam domains (5) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1jdbK17 K:557-668                                                                                ----CPSase_L_D2-1jdbK05 K:673-876                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1jdbK18 K:557-668                                                                                ----CPSase_L_D2-1jdbK06 K:673-876                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1jdbK19 K:557-668                                                                                ----CPSase_L_D2-1jdbK07 K:673-876                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSase_L_chain-1jdbK20 K:557-668                                                                                ----CPSase_L_D2-1jdbK08 K:673-876                                                                                                                                                                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (8)
         Sec.struct. author ........eeeee..........hhhhhhhhhhhhhhhh...eeeee......hhh.hhh..eee.....hhhhhhhhhhh...eee....hhhhhhhhhhhhh..hhhhh..eee...hhhhhhhh.hhhhhhhhhhh......eeee..hhhhhhhhhhh...eeeee.........eee..hhhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh....eeeeeeeee......eeeeeee....hhhhhhhhhh...hhhhhhhhhh.........hhh..............eeeeeee..hhhh..............eeeeeee..hhhhhhhhhhh..................hhhhhhhhhh.....hhhhhhhhhhh...hhhhhhhh...hhhhhhhhhhhhhhhhhhhh......hhhhhhhhh....hhhhhhh....hhhhhhhhhh.....eeee............eeeeee..............eeeee..........hhhhhhhhhhhhhhhhh..eeeeee.....hhh.hhh..eeee....hhhhhhhhhhh...eee.....hhhhhhhhhhhhh........hhhhhhhh.hhhhhhhhhh.......eeee..hhhhhhhhhhh...eeee.-------..eee..hhhhhhhhhh.------..eeeee.....eeeeeeeee....eeeeeeee........hhh..eee......hhhhhhhhhhhhhhhhhh...eeeeeeeee....eeeeeee......hhhhhhhh...hhhhhhhhh....hhhh..........eeeeeeeehhhh.............eeeeeeeee..hhhhhhhhhhh.........eeeee..hhhh..hhhhhhhhhh...eeee.hhhhhhhhhh................hhhhhh.....eeee....hhhhhhhhhhhhhhhh...eee..hhhhhhhhhhhh.........hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ----------------------------------------------------------------------------------------------------------------------CPSASE_2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CPSASE_1       ------------------------------------------------------------------------------------------------------------------CPSASE_2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb K    0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRP-------AMEIVYDEADLRRYFQTA------APVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK 1072
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709     |   -   |   729       739|      749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     715     723              740    747                                                                                                                                                                                                                                                                                                                                     

Chain L from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECO57 | P0A6F2 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECO57      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbl1 L:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbl2 L:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbL01 L:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbL02 L:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
           Pfam domains (1) -CPSase_sm_chain-1jdbL05 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL01 L:194-373                                                                                                                                                            ------- Pfam domains (1)
           Pfam domains (2) -CPSase_sm_chain-1jdbL06 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL02 L:194-373                                                                                                                                                            ------- Pfam domains (2)
           Pfam domains (3) -CPSase_sm_chain-1jdbL07 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL03 L:194-373                                                                                                                                                            ------- Pfam domains (3)
           Pfam domains (4) -CPSase_sm_chain-1jdbL08 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL04 L:194-373                                                                                                                                                            ------- Pfam domains (4)
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee................hhh..eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeee.hhhhhhhhh....eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb L    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

Chain L from PDB  Type:PROTEIN  Length:379
 aligned with CARA_ECOLI | P0A6F1 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:379
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         
          CARA_ECOLI      2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
               SCOP domains d1jdbl1 L:2-152 Carbamoyl phosphate synthetase, small subunit N-terminal domain                                                                        d1jdbl2 L:153-380 Carbamoyl phosphate synthetase, small subunit C-terminal domain                                                                                                                                                    SCOP domains
               CATH domains 1jdbL01 L:2-151  [code=3.50.30.20, no name defined]                                                                                                   1jdbL02 L:152-380  [code=3.40.50.880, no name defined]                                                                                                                                                                                CATH domains
           Pfam domains (1) -CPSase_sm_chain-1jdbL05 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL01 L:194-373                                                                                                                                                            ------- Pfam domains (1)
           Pfam domains (2) -CPSase_sm_chain-1jdbL06 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL02 L:194-373                                                                                                                                                            ------- Pfam domains (2)
           Pfam domains (3) -CPSase_sm_chain-1jdbL07 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL03 L:194-373                                                                                                                                                            ------- Pfam domains (3)
           Pfam domains (4) -CPSase_sm_chain-1jdbL08 L:3-133                                                                                                    ------------------------------------------------------------GATase-1jdbL04 L:194-373                                                                                                                                                            ------- Pfam domains (4)
         Sec.struct. author ..eeeeee....eeeee.....eeeeeeeeee.....hhhhh..hhh..eeeee...........hhh.........eee................hhhhhhh...eee....hhhhhhhhhhh..eeeeeee.....hhhhhhhhhh.........hhhh.....eee................hhh..eeeeeee....hhhhhhhhhh.eeeeeee....hhhhhhh...eeee..........hhhhhhhhhhhh...eeeee.hhhhhhhhh....eee....eee..eeeee....eeeee.eee.eee.hhh....eeeeeee.......eeee....eeee..........hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1jdb L    2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKT  380
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 32)

Asymmetric Unit

(-) CATH Domains  (7, 40)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a1jdbB06B:663-685,B:756-935
1b1jdbE06E:663-685,E:756-935
1c1jdbH06H:663-685,H:756-935
1d1jdbK06K:663-685,K:756-935
1e1jdbB02B:116-139,B:210-402
1f1jdbE02E:116-139,E:210-402
1g1jdbH02H:116-139,H:210-402
1h1jdbK02K:116-139,K:210-402
2a1jdbB03B:140-209
2b1jdbE03E:140-209
2c1jdbH03H:140-209
2d1jdbK03K:140-209
2e1jdbK07K:686-755
2f1jdbB07B:686-755
2g1jdbE07E:686-755
2h1jdbH07H:686-755

(-) Pfam Domains  (6, 32)

Asymmetric Unit
(-)
Family: MGS (13)
6aMGS-1jdbK21K:955-1041
6bMGS-1jdbK22K:955-1041
6cMGS-1jdbK23K:955-1041
6dMGS-1jdbK24K:955-1041

(-) Gene Ontology  (21, 43)

Asymmetric Unit(hide GO term definitions)
Chain B,E,H,K   (CARB_ECOLI | P00968)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004087    carbamoyl-phosphate synthase (ammonia) activity    Catalysis of the reaction: 2 ATP + CO(2) + H(2)O + NH(4)(+) = 2 ADP + carbamoyl phosphate + 5 H(+) + phosphate.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0019856    pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain C,F,I,L   (CARA_ECOLI | P0A6F1)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005951    carbamoyl-phosphate synthase complex    A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Chain C,F,I,L   (CARA_ECO57 | P0A6F2)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004088    carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity    Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006526    arginine biosynthetic process    The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CARA_ECO57 | P0A6F21a9x 1c30 1c3o 1cs0 1kee 1m6v 1t36
        CARA_ECOLI | P0A6F11a9x 1bxr 1c30 1c3o 1ce8 1cs0 1kee 1m6v 1t36
        CARB_ECOLI | P009681a9x 1bxr 1c30 1c3o 1ce8 1cs0 1kee 1m6v 1t36

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1JDB)