Chain A from PDB Type:PROTEIN Length:71
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:71
19 29 39 49 59 69 79
Q8ZYG5_PYRAE 10 ATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
SCOP domains d1i8fa_ A: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fA00 A:10-80 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhh....eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
1i8f A 10 ATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
19 29 39 49 59 69 79
Chain B from PDB Type:PROTEIN Length:72
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:72
18 28 38 48 58 68 78
Q8ZYG5_PYRAE 9 FATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
SCOP domains d1i8fb_ B: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fB00 B:9-80 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------ Transcript
1i8f B 9 FATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
18 28 38 48 58 68 78
Chain C from PDB Type:PROTEIN Length:68
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:68
80
23 33 43 53 63 73 |
Q8ZYG5_PYRAE 14 ATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP- -
SCOP domains d1i8fc_ C: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fC00 C:14-81 [code=2.30.30.100, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
1i8f C 14 ATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVPG 81
23 33 43 53 63 73
Chain D from PDB Type:PROTEIN Length:73
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:73
80
18 28 38 48 58 68 78 |
Q8ZYG5_PYRAE 9 FATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP- -
SCOP domains d1i8fd_ D: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fD00 D:9-81 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
1i8f D 9 FATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVPG 81
18 28 38 48 58 68 78
Chain E from PDB Type:PROTEIN Length:70
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:70
20 30 40 50 60 70 80
Q8ZYG5_PYRAE 11 TLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
SCOP domains d1i8fe_ E: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fE00 E:11-80 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------- Pfam domains
Sec.struct. author ............eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------- Transcript
1i8f E 11 TLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
20 30 40 50 60 70 80
Chain F from PDB Type:PROTEIN Length:77
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:77
80
14 24 34 44 54 64 74 |
Q8ZYG5_PYRAE 5 ISKCFATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP- -
SCOP domains d1i8ff_ F: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fF00 F:5-81 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhh...eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------- Transcript
1i8f F 5 ISKCFATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVPG 81
14 24 34 44 54 64 74
Chain G from PDB Type:PROTEIN Length:68
aligned with Q8ZYG5_PYRAE | Q8ZYG5 from UniProtKB/TrEMBL Length:80
Alignment length:68
22 32 42 52 62 72
Q8ZYG5_PYRAE 13 GATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
SCOP domains d1i8fg_ G: Archaeal homoheptameric Sm protein SCOP domains
CATH domains 1i8fG00 G:13-80 [code=2.30.30.100, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhh...eeeeee...eeeeeeeeee.....eeeeeeeeee..eeeeeeeeee....eeeeee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
1i8f G 13 GATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFISPVP 80
22 32 42 52 62 72
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |