1M1T - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   BIOSYNTHETIC THIOLASE, Q64A MUTANT

Authors :   P. Kursula, J. Ojala, A. -M. Lambeir, R. K. Wierenga

Date :   20 Jun 02 (Deposition) - 29 Nov 02 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.94

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Thiolase Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. Kursula, J. Ojala, A. -M. Lambeir, R. K. Wierenga
The Catalytic Cycle Of Biosynthetic Thiolase: A Conformational Journey Of An Acetyl Group Through Four Binding Modes And Two Oxyanion Holes
Biochemistry V. 41 15543 2002
PubMed-ID: 12501183 | Reference-DOI: 10.1021/BI0266232

Molecule 1 - ACETYL-COA ACETYLTRANSFERASE
	Chains	:	A, B, C, D
	EC Number	:	2.3.1.9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Mutation	:	YES
	Organism Scientific	:	ZOOGLOEA RAMIGERA
	Organism Taxid	:	350
	Synonym	:	ACETOACETYL-COA THIOLASE; BIOSYNTHETIC THIOLASE

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (2, 8)

No.	Name	Count	Type	Full Name
1	GOL	4	Ligand/Ion	GLYCEROL
2	SO4	4	Ligand/Ion	SULFATE ION

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS B:298 , ARG B:302 , HOH B:7534 , HOH B:7748	BINDING SITE FOR RESIDUE SO4 B 5719
2	AC2	SOFTWARE	SER A:260 , ARG A:266	BINDING SITE FOR RESIDUE SO4 A 5720
3	AC3	SOFTWARE	SER B:260 , ARG B:266 , HOH B:7541	BINDING SITE FOR RESIDUE SO4 B 5721
4	AC4	SOFTWARE	LYS A:298 , ARG A:302 , HOH A:6526 , HOH A:6708	BINDING SITE FOR RESIDUE SO4 A 5722
5	AC5	SOFTWARE	HIS A:156 , ALA A:246 , SER A:247 , GLY A:248 , LEU A:249 , HOH A:6639 , HOH A:6672	BINDING SITE FOR RESIDUE GOL A 6393
6	AC6	SOFTWARE	ALA A:37 , ARG A:41 , ILE A:199 , VAL A:200 , HOH A:6529 , HOH A:6594	BINDING SITE FOR RESIDUE GOL A 6394
7	AC7	SOFTWARE	HIS B:156 , SER B:247 , LEU B:249 , ALA B:318 , HIS B:348 , HOH B:7669 , HOH B:7817	BINDING SITE FOR RESIDUE GOL B 7393
8	AC8	SOFTWARE	ALA B:37 , GLU B:40 , ARG B:41 , ILE B:199 , HOH B:7535 , HOH B:7580 , HOH B:7581 , HOH B:7744 , HOH B:7772 , HOH B:7796	BINDING SITE FOR RESIDUE GOL B 7394

(no "SS Bond" information available for 1M1T)

(no "Cis Peptide Bond" information available for 1M1T)

(no "SAP(SNP)/Variant" information available for 1M1T)

Asymmetric/Biological Unit (3, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOLASE_1	PS00098	Thiolases acyl-enzyme intermediate signature.	THIL_ZOORA	85-103	4	A:85-103 B:85-103 C:85-103 D:85-103
2	THIOLASE_2	PS00737	Thiolases signature 2.	THIL_ZOORA	338-354	4	A:338-354 B:338-354 C:338-354 D:338-354
3	THIOLASE_3	PS00099	Thiolases active site.	THIL_ZOORA	373-386	4	A:373-386 B:373-386 C:373-386 D:373-386

(no "Exon" information available for 1M1T)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:392
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:392
                                     11                                                                                                                                                                                                                                                                                                                                                                                             
                                   10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                    |-|       20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390  
           THIL_ZOORA     2 STPSIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1m1ta1 A:1-268 Biosynthetic thiolase                                                                                                                                                                                                                                       d1m1ta2 A:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains ---1m1tA01 A:4-124,A:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1m1tA02 A:152-193,A:276-389               1m1tA01 A:4-124,A:194-275  [code=3.40.47.10, no name defined]                     1m1tA02 A:152-193,A:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee...ee........hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.................eee..........hhhhhhh...................eeeeeeeeeeehhhhhhhh....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh........hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m1t A   1 STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGANPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain B from PDB  Type:PROTEIN  Length:392
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:392
                                     11                                                                                                                                                                                                                                                                                                                                                                                             
                                   10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                    |-|       20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390  
           THIL_ZOORA     2 STPSIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1m1tb1 B:1-268 Biosynthetic thiolase                                                                                                                                                                                                                                       d1m1tb2 B:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains ---1m1tB01 B:4-124,B:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1m1tB02 B:152-193,B:276-389               1m1tB01 B:4-124,B:194-275  [code=3.40.47.10, no name defined]                     1m1tB02 B:152-193,B:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeee..ee........hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.....ee..........eee..........hhhhhhh...................eeeeeeeeeeehhhhhhhh....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m1t B   1 STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGANPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain C from PDB  Type:PROTEIN  Length:392
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:392
                                     11                                                                                                                                                                                                                                                                                                                                                                                             
                                   10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                    |-|       20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390  
           THIL_ZOORA     2 STPSIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1m1tc1 C:1-268 Biosynthetic thiolase                                                                                                                                                                                                                                       d1m1tc2 C:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains ---1m1tC01 C:4-124,C:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1m1tC02 C:152-193,C:276-389               1m1tC01 C:4-124,C:194-275  [code=3.40.47.10, no name defined]                     1m1tC02 C:152-193,C:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeee...ee........hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..................eee..........hhhhhh....................eeeeeeeeeeehhhhhhh.....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh........hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m1t C   1 STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGANPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain D from PDB  Type:PROTEIN  Length:392
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:392
                                     11                                                                                                                                                                                                                                                                                                                                                                                             
                                   10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                    |-|       20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390  
           THIL_ZOORA     2 STPSIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1m1td1 D:1-268 Biosynthetic thiolase                                                                                                                                                                                                                                       d1m1td2 D:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains ---1m1tD01 D:4-124,D:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1m1tD02 D:152-193,D:276-389               1m1tD01 D:4-124,D:194-275  [code=3.40.47.10, no name defined]                     1m1tD02 D:152-193,D:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
           Pfam domains (1) ----------Thiolase_N-1m1tD05 D:11-262                                                                                                                                                                                                                                 ------Thiolase_C-1m1tD01 D:269-391                                                                                               - Pfam domains (1)
           Pfam domains (2) ----------Thiolase_N-1m1tD06 D:11-262                                                                                                                                                                                                                                 ------Thiolase_C-1m1tD02 D:269-391                                                                                               - Pfam domains (2)
           Pfam domains (3) ----------Thiolase_N-1m1tD07 D:11-262                                                                                                                                                                                                                                 ------Thiolase_C-1m1tD03 D:269-391                                                                                               - Pfam domains (3)
           Pfam domains (4) ----------Thiolase_N-1m1tD08 D:11-262                                                                                                                                                                                                                                 ------Thiolase_C-1m1tD04 D:269-391                                                                                               - Pfam domains (4)
         Sec.struct. author ....eeeeeeee...ee........hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.................eee..........hhhhhhh...................eeeeeeeeeeehhhhhhh.....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.......eeee...hhhhhhhhhhhhh.hhhhh....hhhhhh.hhhhhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m1t D   1 STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGANPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thiolase-like (231)

Superfamily: Thiolase-like (231)

Family: Thiolase-related (67)

Protein domain: Biosynthetic thiolase (16)

Zoogloea ramigera [TaxId: 350] (16)

1a	d1m1ta1	A:1-268
1b	d1m1ta2	A:269-392
1c	d1m1tb1	B:1-268
1d	d1m1tb2	B:269-392
1e	d1m1tc1	C:1-268
1f	d1m1tc2	C:269-392
1g	d1m1td1	D:1-268
1h	d1m1td2	D:269-392

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Peroxisomal Thiolase; Chain A, domain 1 (130)

Homologous Superfamily: [code=3.40.47.10, no name defined] (130)

Zoogloea ramigera. Organism_taxid: 350. (19)

1a	1m1tA01	A:4-124,A:194-275
1b	1m1tA02	A:152-193,A:276-389
1c	1m1tB02	B:152-193,B:276-389
1d	1m1tC02	C:152-193,C:276-389
1e	1m1tD02	D:152-193,D:276-389
1f	1m1tB01	B:4-124,B:194-275
1g	1m1tC01	C:4-124,C:194-275
1h	1m1tD01	D:4-124,D:194-275

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Thiolase (72)

Family: Thiolase_C (23)

Zoogloea ramigera (15)

1a	Thiolase_C-1m1tD01	D:269-391
1b	Thiolase_C-1m1tD02	D:269-391
1c	Thiolase_C-1m1tD03	D:269-391
1d	Thiolase_C-1m1tD04	D:269-391

Family: Thiolase_N (23)

Zoogloea ramigera (15)

2a	Thiolase_N-1m1tD05	D:11-262
2b	Thiolase_N-1m1tD06	D:11-262
2c	Thiolase_N-1m1tD07	D:11-262
2d	Thiolase_N-1m1tD08	D:11-262

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (THIL_ZOORA | P07097)

molecular function
	GO:0003985	acetyl-CoA C-acetyltransferase activity	Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0042619	poly-hydroxybutyrate biosynthetic process	The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1m1t)

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	1m1t
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		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
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	THIL_ZOORA \| P07097
		Comparative Protein Structure Models	:	ModBase
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		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

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	2.3.1.9
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
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	THIL_ZOORA \| P07097
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (3, 12)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (2, 8)

Gene Ontology (8, 8)

Visualization

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Still Images

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Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File