Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit - manually
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit - manually
Asym./Biol. Unit - manually  (Jmol Viewer)
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH COA
 
Authors :  Y. Modis, R. K. Wierenga
Date :  12 Dec 99  (Deposition) - 24 Apr 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.29
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Biosynthetic Thiolase, Coa, Tetramer, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Modis, R. K. Wierenga
Crystallographic Analysis Of The Reaction Pathway Of Zoogloea Ramigera Biosynthetic Thiolase.
J. Mol. Biol. V. 297 1171 2000
PubMed-ID: 10764581  |  Reference-DOI: 10.1006/JMBI.2000.3638
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BIOSYNTHETIC THIOLASE
    Cellular LocationCYTOPLASM
    ChainsA, B, C, D
    EC Number2.3.1.9
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPTRC99A
    Expression System Taxid562
    Expression System Vector TypePLASMID
    Organism ScientificZOOGLOEA RAMIGERA
    Organism Taxid350

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric/Biological Unit (2, 10)
No.NameCountTypeFull Name
1COA4Ligand/IonCOENZYME A
2SO46Ligand/IonSULFATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS B:298 , ARG B:302 , HOH B:5175 , HOH B:5221BINDING SITE FOR RESIDUE SO4 B 5001
02AC2SOFTWARESER A:260 , ALA A:262 , GLU A:263 , ARG A:266 , HOH A:5180BINDING SITE FOR RESIDUE SO4 A 5002
03AC3SOFTWARESER B:260 , GLU B:263 , ARG B:266 , HOH B:5184BINDING SITE FOR RESIDUE SO4 B 5003
04AC4SOFTWAREARG A:302 , HOH A:5156 , HOH A:5282BINDING SITE FOR RESIDUE SO4 A 5004
05AC5SOFTWAREARG A:41 , ILE A:199 , VAL A:200 , PRO A:201 , HOH A:5159 , HOH A:5256 , HOH A:5291BINDING SITE FOR RESIDUE SO4 A 5005
06AC6SOFTWAREARG B:41 , ILE B:199 , VAL B:200 , PRO B:201 , HOH B:5176 , HOH B:5242 , HOH B:5245BINDING SITE FOR RESIDUE SO4 B 5006
07AC7SOFTWARELEU A:148 , HIS A:156 , MET A:157 , ARG A:220 , SER A:227 , LEU A:231 , ALA A:243 , GLY A:244 , SER A:247 , MET A:288 , PHE A:319 , HOH A:5092 , HOH A:5098 , HOH A:5126 , HOH A:5167 , HOH A:5170 , MET D:134BINDING SITE FOR RESIDUE COA A 1001
08AC8SOFTWARELEU B:148 , HIS B:156 , MET B:157 , ARG B:220 , SER B:227 , MET B:228 , PHE B:235 , ALA B:243 , GLY B:244 , SER B:247 , MET B:288 , PHE B:319 , HOH B:5023 , HOH B:5051 , HOH B:5056 , HOH B:5090 , HOH B:5214BINDING SITE FOR RESIDUE COA B 2001
09AC9SOFTWARELEU C:148 , HIS C:156 , MET C:157 , ARG C:220 , SER C:227 , MET C:228 , PHE C:235 , ALA C:243 , GLY C:244 , SER C:247 , MET C:288 , PHE C:319 , HIS C:348BINDING SITE FOR RESIDUE COA C 3001
10BC1SOFTWARELEU D:148 , HIS D:156 , MET D:157 , ARG D:220 , SER D:227 , MET D:228 , LEU D:231 , ALA D:243 , GLY D:244 , SER D:247 , MET D:288 , PHE D:319 , HIS D:348 , HOH D:4039BINDING SITE FOR RESIDUE COA D 4001

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1DLV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1DLV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1DLV)

(-) PROSITE Motifs  (3, 12)

Asymmetric/Biological Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOLASE_1PS00098 Thiolases acyl-enzyme intermediate signature.THIL_ZOORA85-103
 
 
 
  4A:85-103
B:85-103
C:85-103
D:85-103
2THIOLASE_2PS00737 Thiolases signature 2.THIL_ZOORA338-354
 
 
 
  4A:338-354
B:338-354
C:338-354
D:338-354
3THIOLASE_3PS00099 Thiolases active site.THIL_ZOORA373-386
 
 
 
  4A:373-386
B:373-386
C:373-386
D:373-386

(-) Exons   (0, 0)

(no "Exon" information available for 1DLV)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:389
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:389
                                  11                                                                                                                                                                                                                                                                                                                                                                                             
                                10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                 | |13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
           THIL_ZOORA     5 SIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1dlva1 A:4-268 Biosynthetic thiolase                                                                                                                                                                                                                                    d1dlva2 A:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains 1dlvA01 A:4-124,A:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1dlvA02 A:152-193,A:276-389               1dlvA01 A:4-124,A:194-275  [code=3.40.47.10, no name defined]                     1dlvA02 A:152-193,A:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.............hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh........eee......eee..........hhhhhhh....................eeeeeeeeeehhhhhhhh....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh........hhhhhhhhhhhhh.hhhh.....hhhhhh....hhhhhhhhhhhhhhhhhh.............eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dlv A   4 SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         

Chain B from PDB  Type:PROTEIN  Length:389
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:389
                                  11                                                                                                                                                                                                                                                                                                                                                                                             
                                10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                 | |13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
           THIL_ZOORA     5 SIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1dlvb1 B:4-268 Biosynthetic thiolase                                                                                                                                                                                                                                    d1dlvb2 B:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains 1dlvB01 B:4-124,B:194-275  [code=3.40.47.10, no name defined]                                                            --------------------------1dlvB02 B:151-193,B:276-389                1dlvB01 B:4-124,B:194-275  [code=3.40.47.10, no name defined]                     1dlvB02 B:151-193,B:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee............hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh.....eeeeeee......eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh......ee.eee......eee..........hhhhhhh...................eeeeeeeeeeehhhhhhh.....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhh.....hhhhhh....hhhhhhhhhhhhhhhhhh..eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dlv B   4 SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         

Chain C from PDB  Type:PROTEIN  Length:389
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:389
                                  11                                                                                                                                                                                                                                                                                                                                                                                             
                                10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                 | |13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
           THIL_ZOORA     5 SIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1dlvc1 C:4-268 Biosynthetic thiolase                                                                                                                                                                                                                                    d1dlvc2 C:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains 1dlvC01 C:4-124,C:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1dlvC02 C:152-193,C:276-389               1dlvC01 C:4-124,C:194-275  [code=3.40.47.10, no name defined]                     1dlvC02 C:152-193,C:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee...ee........hhhhhhhhhhhhhhhhh..hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eee..........eeeeehhhhhh........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.........eee......eee..........hhhhhhhh..................eeeeeeeeeeehhhhhhhh....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh........hhhhhhhhhhhhh.hhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhhhh.............eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dlv C   4 SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         

Chain D from PDB  Type:PROTEIN  Length:389
 aligned with THIL_ZOORA | P07097 from UniProtKB/Swiss-Prot  Length:392

    Alignment length:389
                                  11                                                                                                                                                                                                                                                                                                                                                                                             
                                10 |                                                                                                                                                                                                                                                                                                                                                                                             
                                 | |13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         
           THIL_ZOORA     5 SIVIAS-ARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLAGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
               SCOP domains d1dlvd1 D:4-268 Biosynthetic thiolase                                                                                                                                                                                                                                    d1dlvd2 D:269-392 Biosynthetic thiolase                                                                                      SCOP domains
               CATH domains 1dlvD01 D:4-124,D:194-275  [code=3.40.47.10, no name defined]                                                            ---------------------------1dlvD02 D:152-193,D:276-389               1dlvD01 D:4-124,D:194-275  [code=3.40.47.10, no name defined]                     1dlvD02 D:152-193,D:276-389  [code=3.40.47.10, no name defined]                                                   --- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.............hhhhhhhhhhhhhhhhhh.hhhhh.eeeee.........hhhhhhhhhh......eeeeeehhhhhhhhhhhhhhhhhhh....eeeeeeeee.....eee..........eeeeehhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...............................hhhhhhh...................eeeeeeeeeeehhhhhhh.....eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.hhhhh.eeee...hhhhhhhhhhhhh.hhhh.....hhhhhh....hhhhhhhhhhhhhhhhh...eeeeeeee...eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------THIOLASE_1         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOLASE_2       ------------------THIOLASE_3    ------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1dlv D   4 SIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric/Biological Unit
1ad1dlva1A:4-268
1bd1dlva2A:269-392
1cd1dlvb1B:4-268
1dd1dlvb2B:269-392
1ed1dlvc1C:4-268
1fd1dlvc2C:269-392
1gd1dlvd1D:4-268
1hd1dlvd2D:269-392

(-) CATH Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
1a1dlvA01A:4-124,A:194-275
1b1dlvB02B:151-193,B:276-389
1c1dlvA02A:152-193,A:276-389
1d1dlvC02C:152-193,C:276-389
1e1dlvD02D:152-193,D:276-389
1f1dlvB01B:4-124,B:194-275
1g1dlvC01C:4-124,C:194-275
1h1dlvD01D:4-124,D:194-275

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1DLV)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (THIL_ZOORA | P07097)
molecular function
    GO:0003985    acetyl-CoA C-acetyltransferase activity    Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
    GO:0016747    transferase activity, transferring acyl groups other than amino-acyl groups    Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0042619    poly-hydroxybutyrate biosynthetic process    The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    COA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1dlv)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1dlv
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  THIL_ZOORA | P07097
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  2.3.1.9
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  THIL_ZOORA | P07097
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        THIL_ZOORA | P070971dlu 1dm3 1m1o 1m1t 1m3k 1m3z 1m4s 1m4t 1nl7 1ou6 1qfl 2vtz 2vu0 2vu1 2vu2 2wkt 2wku 2wkv 2wl4 2wl5 2wl6

(-) Related Entries Specified in the PDB File

1dlu BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA
1dm3 ACETYLATED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH ACETYL- COA
1qfl ACETYLATED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH COA