PFAM Search:   
       by Pfam accession/ID, keyword
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  

Full view: branches of nodes matching the query are shown completely (Compact view)

(use 'Shift Left-Click' to collapse/expand all levels downwards; use 'Control Left-Click' to collapse/expand all levels upwards)
 
(-)
Clan: Ubiquitin (279)
(-)
Family: ubiquitin (99)
(-)
Arabidopsis thaliana (Mouse-ear cress) (4)
2KK8A:16-84NMR SOLUTION STRUCTURE OF A PUTATIVE UNCHARACTERIZED PROTEIN OBTAINED FROM ARABIDOPSIS THALIANA: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET AR3449A
2KANA:21-90SOLUTION NMR STRUCTURE OF UBIQUITIN-LIKE DOMAIN OF ARABIDOPSIS THALIANA PROTEIN AT2G32350. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET AR3433A
1WE6A:38-105SOLUTION STRUCTURE OF UBIQUITIN-LIKE DOMAIN IN SPLICING FACTOR AAL91182
2KD0A:18-85NMR SOLUTION STRUCTURE OF O64736 PROTEIN FROM ARABIDOPSIS THALIANA. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM MEGA TARGET AR3445A
(-)
Bos taurus (Bovine) (12)
1P3QV:6-73; V:6-73MECHANISM OF UBIQUITIN RECOGNITION BY THE CUE DOMAIN OF VPS9
1UZXB:6-74A COMPLEX OF THE VPS23 UEV WITH UBIQUITIN
1V80A:6-74SOLUTION STRUCTURES OF UBIQUITIN AT 30 BAR AND 3 KBAR
1V81A:6-74SOLUTION STRUCTURES OF UBIQUITIN AT 30 BAR AND 3 KBAR
1WRDB:6-74CRYSTAL STRUCTURE OF TOM1 GAT DOMAIN IN COMPLEX WITH UBIQUITIN
1YD8V:6-73; V:6-73COMPLEX OF HUMAN GGA3 GAT DOMAIN AND UBIQUITIN
2OOBB:6-72CRYSTAL STRUCTURE OF THE UBA DOMAIN FROM CBL-B UBIQUITIN LIGASE IN COMPLEX WITH UBIQUITIN
2QHOG:6-72; G:6-72; G:6-72; G:6-72CRYSTAL STRUCTURE OF THE UBA DOMAIN FROM EDD UBIQUITIN LIGASE IN COMPLEX WITH UBIQUITIN
2WWZB:6-72; B:6-72TAB2 NZF DOMAIN IN COMPLEX WITH LYS63-LINKED DI-UBIQUITIN, P212121
2WX0F:6-73; F:6-73; F:6-73; F:6-73TAB2 NZF DOMAIN IN COMPLEX WITH LYS63-LINKED DI-UBIQUITIN, P21
2WX1B:6-70; B:6-70TAB2 NZF DOMAIN IN COMPLEX WITH LYS63-LINKED TRI-UBIQUITIN, P212121
3M3JF:6-73; F:6-73; F:6-73; F:6-73; F:6-73; F:6-73A NEW CRYSTAL FORM OF LYS48-LINKED DIUBIQUITIN
(-)
Caenorhabditis elegans (1)
1T7SB:74-83; B:74-83STRUCTURAL GENOMICS OF CAENORHABDITIS ELEGANS: STRUCTURE OF BAG-1 PROTEIN
(-)
Homo sapiens (Human) (67)
1WXVA:22-86SOLUTION STRUCTURE OF THE UBIQUITIN DOMAIN OF BCL-2 BINDING ATHANOGENE-1
1WX9A:13-80SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN IN THE HUMAN BAT3 PROTEIN
1LM8B:7-67STRUCTURE OF A HIF-1A-PVHL-ELONGINB-ELONGINC COMPLEX
1VCBJ:7-67; J:7-67; J:7-67; J:7-67THE VHL-ELONGINC-ELONGINB STRUCTURE
2JZ3B:7-67SOCS BOX ELONGINBC TERNARY COMPLEX
2KDBA:7-77SOLUTION STRUCTURE OF HUMAN UBIQUITIN-LIKE DOMAIN OF HERPUD2_9_85, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HT53A
1Z2MA:87-154; A:87-154CRYSTAL STRUCTURE OF ISG15, THE INTERFERON-INDUCED UBIQUITIN CROSS REACTIVE PROTEIN
3PHXB:87-155OTU DOMAIN OF CRIMEAN CONGO HEMORRHAGIC FEVER VIRUS IN COMPLEX WITH ISG15
3PSEB:87-155; B:87-155STRUCTURE OF A VIRAL OTU DOMAIN PROTEASE BOUND TO INTERFERON-STIMULATED GENE 15 (ISG15)
3R66D:87-154; D:87-154; D:87-154; D:87-154CRYSTAL STRUCTURE OF HUMAN ISG15 IN COMPLEX WITH NS1 N-TERMINAL REGION FROM INFLUENZA VIRUS B, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET IDS HX6481, HR2873, AND OR2
1R4ML:106-174; L:106-174; L:106-174; L:106-174APPBP1-UBA3-NEDD8, AN E1-UBIQUITIN-LIKE PROTEIN COMPLEX
1XT9B:6-74CRYSTAL STRUCTURE OF DEN1 IN COMPLEX WITH NEDD8
2KO3A:6-74NEDD8 SOLUTION STRUCTURE
2NVUJ:6-74; J:6-74STRUCTURE OF APPBP1-UBA3~NEDD8-NEDD8-MGATP-UBC12(C111A), A TRAPPED UBIQUITIN-LIKE PROTEIN ACTIVATION COMPLEX
1WH3A:13-81SOLUTION STRUCTURE OF C-TERMINAL UBIQUITIN LIKE DOMAIN OF HUMAN 2'-5'-OLIGOADENYLATE SYNTHETASE-LIKE PROTAIN (P59 OASL)
1OQYA:8-80STRUCTURE OF THE DNA REPAIR PROTEIN HHR23A
1P98A:8-78HIGH-RESOLUTION NMR STRUCTURE OF THE UBL-DOMAIN OF HHR23A
1P9DU:8-78HIGH-RESOLUTION STRUCTURE OF THE COMPLEX OF HHR23A UBIQUITIN-LIKE DOMAIN AND THE C-TERMINAL UBIQUITIN-INTERACTING MOTIF OF PROTEASOME SUBUNIT S5A
1QZEA:8-77HHR23A PROTEIN STRUCTURE BASED ON RESIDUAL DIPOLAR COUPLING DATA
2WYQA:8-77THE CRYSTAL STRUCTURE OF THE UBIQUITIN-LIKE (UBL) DOMAIN OF HHR23A (HUMAN HOMOLOGUE A OF RAD23)
1P1AA:9-81NMR STRUCTURE OF UBIQUITIN-LIKE DOMAIN OF HHR23B
1UELA:6-78SOLUTION STRUCTURE OF UBIQUITIN-LIKE DOMAIN OF HHR23B COMPLEXED WITH UBIQUITIN-INTERACTING MOTIF OF PROTEASOME SUBUNIT S5A
1NBFD:306-374; D:306-374CRYSTAL STRUCTURE OF A UBP-FAMILY DEUBIQUITINATING ENZYME IN ISOLATION AND IN COMPLEX WITH UBIQUITIN ALDEHYDE
1Q5WB:106-174UBIQUITIN RECOGNITION BY NPL4 ZINC-FINGERS
1S1QD:6-74; D:6-74TSG101(UEV) DOMAIN IN COMPLEX WITH UBIQUITIN
1YX5B:6-74SOLUTION STRUCTURE OF S5A UIM-1/UBIQUITIN COMPLEX
1YX6B:6-74SOLUTION STRUCTURE OF S5A UIM-2/UBIQUITIN COMPLEX
2JF5B:6-74; B:6-74CRYSTAL STRUCTURE OF LYS63-LINKED DI-UBIQUITIN
2JZZA:6-74SOLID-STATE NMR STRUCTURE OF MICROCRYSTALLINE UBIQUITIN
2K6DB:6-74CIN85 SH3-C DOMAIN IN COMPLEX WITH UBIQUITIN
2K8BA:6-74SOLUTION STRUCTURE OF PLAA FAMILY UBIQUITIN BINDING DOMAIN (PFUC) CIS ISOMER IN COMPLEX WITH UBIQUITIN
2K8CA:6-74SOLUTION STRUCTURE OF PLAA FAMILY UBIQUITIN BINDING DOMAIN (PFUC) TRANS ISOMER IN COMPLEX WITH UBIQUITIN
2KDFC:82-150; C:82-150NMR STRUCTURE OF MINOR S5A (196-306):K48 LINKED DIUBIQUITIN SPECIES
2KJHB:6-74NMR BASED STRUCTURAL MODEL OF THE UBCH8-UBIQUITIN COMPLEX
2KLGA:6-74PERE NMR STRUCTURE OF UBIQUITIN
2KN5A:6-74A CORRESPONDENCE BETWEEN SOLUTION-STATE DYNAMICS OF AN INDIVIDUAL PROTEIN AND THE SEQUENCE AND CONFORMATIONAL DIVERSITY OF ITS FAMILY
2KOXA:6-74NMR RESIDUAL DIPOLAR COUPLINGS IDENTIFY LONG RANGE CORRELATED MOTIONS IN THE BACKBONE OF THE PROTEIN UBIQUITIN
2KTFA:6-74SOLUTION NMR STRUCTURE OF HUMAN POLYMERASE IOTA UBM2 IN COMPLEX WITH UBIQUITIN
2KWUB:6-74SOLUTION STRUCTURE OF UBM2 OF MURINE POLYMERASE IOTA IN COMPLEX WITH UBIQUITIN
2KWVB:6-74SOLUTION STRUCTURE OF UBM1 OF MURINE POLYMERASE IOTA IN COMPLEX WITH UBIQUITIN
2L0FA:6-74SOLUTION NMR STRUCTURE OF HUMAN POLYMERASE IOTA UBM2 (P692A MUTANT) IN COMPLEX WITH UBIQUITIN
2L0TA:6-74SOLUTION STRUCTURE OF THE COMPLEX OF UBIQUITIN AND THE VHS DOMAIN OF STAM2
2NR2A:6-74THE MUMO (MINIMAL UNDER-RESTRAINING MINIMAL OVER-RESTRAINING) METHOD FOR THE DETERMINATION OF NATIVE STATES ENSEMBLES OF PROTEINS
2OJRA:106-174STRUCTURE OF UBIQUITIN SOLVED BY SAD USING THE LANTHANIDE-BINDING TAG
2PE9B:6-72; B:6-72NMR BASED STRUCTURE OF THE OPEN CONFORMATION OF LYS48-LINKED DI-UBIQUITIN USING EXPERIMENTAL GLOBAL ROTATIONAL DIFFUSION TENSOR FROM NMR RELAXATION MEASUREMENTS
2WDTD:6-74; D:6-74CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM UCHL3 IN COMPLEX WITH THE SUICIDE INHIBITOR UBVME
2XEWL:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74; L:6-74CRYSTAL STRUCTURE OF K11-LINKED DIUBIQUITIN
2XK5B:6-74; B:6-74CRYSTAL STRUCTURE OF K6-LINKED DIUBIQUITIN
2ZCBC:6-72; C:6-72; C:6-72CRYSTAL STRUCTURE OF UBIQUITIN P37A/P38A
3JVZY:6-74; Y:6-74E2~UBIQUITIN-HECT
3KVFB:6-74CRYSTAL STRUCTURE OF THE I93M MUTANT OF UBIQUITIN CARBOXY TERMINAL HYDROLASE L1 BOUND TO UBIQUITIN VINYLMETHYLESTER
3KW5B:6-74CRYSTAL STRUCTURE OF UBIQUITIN CARBOXY TERMINAL HYDROLASE L1 BOUND TO UBIQUITIN VINYLMETHYLESTER
3MTND:6-74; D:6-74USP21 IN COMPLEX WITH A UBIQUITIN-BASED, USP21-SPECIFIC INHIBITOR
3N30B:6-74; B:6-74CRYSTAL STRUCTURE OF CUBIC ZN3-HUB (HUMAN UBIQUITIN) ADDUCT
3N32A:6-74THE CRYSTAL STRUCTURE OF HUMAN UBIQUITIN ADDUCT WITH ZEISE'S SALT
3NHEB:6-74HIGH RESOLUTION STRUCTURE (1.26A) OF USP2A IN COMPLEX WITH UBIQUITIN
3PHDH:6-74; H:6-74; H:6-74CRYSTAL STRUCTURE OF HUMAN HDAC6 IN COMPLEX WITH UBIQUITIN
3PHWH:6-74; H:6-74; H:6-74; H:6-74OTU DOMAIN OF CRIMEAN CONGO HEMORRHAGIC FEVER VIRUS IN COMPLEX WITH UBIQUITIN
1ZKHA:14-85SOLUTION STRUCTURE OF A HUMAN UBIQUITIN-LIKE DOMAIN IN SF3A1
2KX3A:8-79THE SOLUTION STRUCTURE OF THE MUTANT OF UBL DOMAIN OF UBLCP1, I5M
2L7RA:5-72SOLUTION NMR STRUCTURE OF N-TERMINAL UBIQUITIN-LIKE DOMAIN OF FUBI, A RIBOSOMAL PROTEIN S30 PRECURSOR FROM HOMO SAPIENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR6166
1P0RA:8-73SOLUTION STRUCTURE OF UBL5 A HUMAN UBIQUITIN-LIKE PROTEIN
2KLCA:31-98NMR SOLUTION STRUCTURE OF HUMAN UBIQUITIN-LIKE DOMAIN OF UBIQUILIN 1, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HT5A
1WX7A:23-90SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN IN THE HUMAN UBIQUILIN 3 (UBQLN3)
1YQBA:27-94HUMAN UBIQUILIN 3
1TTNA:29-97SOLUTION STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN OF HUMAN DC-UBP FROM DENDRITIC CELLS
1WY8A:13-83SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN IN HUMAN NP95/ICBP90-LIKE RING FINGER PROTEIN (NIRF)
(-)
Mus musculus (Mouse) (6)
1V5OA:17-86SOLUTION STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN FROM MOUSE HYPOTHETICAL 1700011N24RIK PROTEIN
2ZNVF:6-70; F:6-70; F:6-70; F:6-70CRYSTAL STRUCTURE OF HUMAN AMSH-LP DUB DOMAIN IN COMPLEX WITH LYS63-LINKED UBIQUITIN DIMER
1WE7A:41-109SOLUTION STRUCTURE OF UBIQUITIN-LIKE DOMAIN IN SF3A120
1V5TA:13-84SOLUTION STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN FROM MOUSE HYPOTHETICAL 8430435I17RIK PROTEIN
1UH6A:35-100SOLUTION STRUCTURE OF THE MURINE UBIQUITIN-LIKE 5 PROTEIN FROM RIKEN CDNA 0610031K06
1X1MA:44-100SOLUTION STRUCTURE OF THE N-TERMINAL UBIQUITIN-LIKE DOMAIN IN MOUSE UBIQUITIN-LIKE PROTEIN SB132
(-)
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) (1)
3PRPD:6-74; D:6-74STRUCTURAL ANALYSIS OF A VIRAL OTU DOMAIN PROTEASE FROM THE CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS IN COMPLEX WITH HUMAN UBIQUITIN
(-)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast) (8)
3M63B:7-74CRYSTAL STRUCTURE OF UFD2 IN COMPLEX WITH THE UBIQUITIN-LIKE (UBL) DOMAIN OF DSK2
1M94A:8-72SOLUTION STRUCTURE OF THE YEAST UBIQUITIN-LIKE MODIFIER PROTEIN HUB1
3PLUB:8-72; B:8-72STRUCTURE OF HUB-1 PROTEIN IN COMPLEX WITH SNU66 PEPTIDE (HINDI)
3PLVA:8-72STRUCTURE OF HUB-1 PROTEIN IN COMPLEX WITH SNU66 PEPTIDE (HINDII)
3M62B:7-74CRYSTAL STRUCTURE OF UFD2 IN COMPLEX WITH THE UBIQUITIN-LIKE (UBL) DOMAIN OF RAD23
1L2NA:27-96SMT3 SOLUTION STRUCTURE
3PGEA:27-96STRUCTURE OF SUMOYLATED PCNA
3QHTB:27-94; B:27-94CRYSTAL STRUCTURE OF THE MONOBODY YSMB-1 BOUND TO YEAST SUMO