Chain A from PDB Type:PROTEIN Length:516
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d1r4ma_ A: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 1r4mA01 A:6-178,A:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1r4mA01 A:6-178,A:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhh.eeee...hhhhhhhhhhhhh....eeeee.....hhhhhhhh...hhhhh..hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhh.--------.....hhhhhhhhhhhhhhhh.........hhhhhhhhhhhh....-----...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhheee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeee....eeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: A:53-7----------Exon 2.6 PDB: A:84-107 Exon 2.7 PDB: A:108-134 ------------------------------------Exon 2.9 PDB: A:171-199 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: A:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: A:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: A:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: A:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: A:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: A:345-370 -------------Exon 2.17 PDB: A:384-413 ------------------------------Exon 2.19 PDB: A:444-482 ----------------Exon 2.21b PDB: A:499-534 Transcript 2 (2)
1r4m A 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY--------DHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
199 208 253 259
Chain B from PDB Type:PROTEIN Length:418
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:430
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462
UBA3_HUMAN 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d1r4mb_ B: UBA3 SCOP domains
CATH domains 1r4mB01 B:12-209,B:289-339 NAD(P)-binding Rossmann-like Domain --1r4mB02 B:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 1r4mB01 B:12-209,B:289-339 1r4mB03 B:340-602 ------ ---------- ------------------ CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhh.............hhhhhhhhhh.eeee...hhhhhhhhhhhh.....eeee.....hhhhh......hhhhh..hhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh.eee..eeehhhh..eeeeeee..eeeeeee..........hhhhh......hhhhhhh...hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee................ee...........hhhhhhhh.........ee..----........hhhhhhhh.-------..hhhhhh..-...ee...........ee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: B:12-40 Exon 3.4a PDB: B:41-67 Exon 3.5a PDB: B:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: B:159-210 UniProt: 180-231 Exon 3.10 PDB: B:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: B:313-340 Exon 3.15 PDB: B:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) -----------------------------------------------------------------------------------Exon 3.6 PDB: B:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: B:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b UniProt: 435-463 Transcript 3 (2)
1r4m B 12 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITAT----NRTLYLQSVTSIEERTR-------KELGLVDGQE-AVADVTTPQTVLFKLHFT 917
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 | 391 || 604 | - | 801| | 907 917
384 389 396| 608 700 706| | |
600 800 | |
802 |
900
Chain C from PDB Type:PROTEIN Length:516
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d1r4mc_ C: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 1r4mC01 C:6-178,C:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1r4mC01 C:6-178,C:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhheeee...hhhhhhhhhhhhh....eeeee.....hhhhhhhh...hhhhh..hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhh.--------.....hhhhhhhhhhhhhhhh.........hhhhhhhhhhhh....-----...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhheee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeee....eeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: C:53-7----------Exon 2.6 PDB: C:84-107 Exon 2.7 PDB: C:108-134 ------------------------------------Exon 2.9 PDB: C:171-199 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: C:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: C:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: C:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: C:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: C:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: C:345-370 -------------Exon 2.17 PDB: C:384-413 ------------------------------Exon 2.19 PDB: C:444-482 ----------------Exon 2.21b PDB: C:499-534 Transcript 2 (2)
1r4m C 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY--------DHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
199 208 253 259
Chain D from PDB Type:PROTEIN Length:418
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:430
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462
UBA3_HUMAN 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d1r4md_ D: UBA3 SCOP domains
CATH domains 1r4mD01 D:12-209,D:289-339 NAD(P)-binding Rossmann-like Domain --1r4mD02 D:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 1r4mD01 D:12-209,D:289-339 1r4mD03 D:340-602 ------ ---------- ------------------ CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhh.............hhhhhhhhhheeeee...hhhhhhhhhhhh....eeeee.....hhhhh......hhhhh..hhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh.eee..eeehhhh..eeeeeee..eeeeeee..........hhhhh......hhhhhhh...hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee................ee...........hhhhhhhh.........ee..----........hhhhhhhh.-------..hhhhhh..-...ee...........ee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: D:12-40 Exon 3.4a PDB: D:41-67 Exon 3.5a PDB: D:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: D:159-210 UniProt: 180-231 Exon 3.10 PDB: D:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: D:313-340 Exon 3.15 PDB: D:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) -----------------------------------------------------------------------------------Exon 3.6 PDB: D:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: D:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b UniProt: 435-463 Transcript 3 (2)
1r4m D 12 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITAT----NRTLYLQSVTSIEERTR-------KELGLVDGQE-AVADVTTPQTVLFKLHFT 917
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 | 391 || 604 | - | 801| | 907 917
384 389 396| 608 700 706| | |
600 800 | |
802 |
900
Chain E from PDB Type:PROTEIN Length:516
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d1r4me_ E: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 1r4mE01 E:6-178,E:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1r4mE01 E:6-178,E:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhheeee...hhhhhhhhhhhhh....eeeee.....hhhhhhhh...hhhhh..hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhh.--------.....hhhhhhhhhhhhhhhh.........hhhhhhhhhhhh....-----...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhheee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeee....eeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: E:53-7----------Exon 2.6 PDB: E:84-107 Exon 2.7 PDB: E:108-134 ------------------------------------Exon 2.9 PDB: E:171-199 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: E:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: E:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: E:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: E:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: E:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: E:345-370 -------------Exon 2.17 PDB: E:384-413 ------------------------------Exon 2.19 PDB: E:444-482 ----------------Exon 2.21b PDB: E:499-534 Transcript 2 (2)
1r4m E 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY--------DHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
199 208 253 259
Chain F from PDB Type:PROTEIN Length:418
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:430
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462
UBA3_HUMAN 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d1r4mf_ F: UBA3 SCOP domains
CATH domains 1r4mF01 F:12-209,F:289-339 NAD(P)-binding Rossmann-like Domain --1r4mF02 F:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 1r4mF01 F:12-209,F:289-339 1r4mF03 F:340-602 ------ ---------- ------------------ CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhh.............hhhhhhhhhh.eeee...hhhhhhhhhhhh.....eeee.....hhhhh......hhhhh..hhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh.eee..eeehhhh..eeeeeee..eeeeeee..........hhhhh......hhhhhhh...hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee................ee...........hhhhhhhh.........ee..----........hhhhhhhh.-------..hhhhhh..-...ee...........ee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: F:12-40 Exon 3.4a PDB: F:41-67 Exon 3.5a PDB: F:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: F:159-210 UniProt: 180-231 Exon 3.10 PDB: F:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: F:313-340 Exon 3.15 PDB: F:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) -----------------------------------------------------------------------------------Exon 3.6 PDB: F:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: F:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b UniProt: 435-463 Transcript 3 (2)
1r4m F 12 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITAT----NRTLYLQSVTSIEERTR-------KELGLVDGQE-AVADVTTPQTVLFKLHFT 917
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 | 391 || 604 | - | 801| | 907 917
384 389 396| 608 700 706| | |
600 800 | |
802 |
900
Chain G from PDB Type:PROTEIN Length:516
aligned with ULA1_HUMAN | Q13564 from UniProtKB/Swiss-Prot Length:534
Alignment length:529
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
ULA1_HUMAN 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
SCOP domains d1r4mg_ G: Amyloid beta precursor protein-binding protein 1, APPBP1 SCOP domains
CATH domains 1r4mG01 G:6-178,G:388-534 NAD(P)-binding Rossmann-like Domain -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1r4mG01 G:6-178,G:388-534 NAD(P)-binding Rossmann-like Domain CATH domains
Pfam domains (1) -----------------------ThiF-1r4mG01 G:29-165 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) -----------------------ThiF-1r4mG02 G:29-165 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
Pfam domains (3) -----------------------ThiF-1r4mG03 G:29-165 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
Pfam domains (4) -----------------------ThiF-1r4mG04 G:29-165 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhheeee...hhhhhhhhhhhhh....eeeee.....hhhhhhhh...hhhhh..hhhhhhhhhhhh.....eeeee..hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhh..eeeeeee..eeeeeee...eee.................hhhhhhhhhh.--------.....hhhhhhhhhhhhhhhh.........hhhhhhhhhhhh....-----...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhheee...hhhhhhh....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........eeee....eeee... Sec.struct. author
SAPs(SNPs) -----------------------------------------------------------------------------------------------F------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 (1) Exon 2.1a ----------------------------------Exon 2.4 PDB: G:53-7----------Exon 2.6 PDB: G:84-107 Exon 2.7 PDB: G:108-134 ------------------------------------Exon 2.9 PDB: G:171-199 [INCOMPLETE]Exon 2.10 Exon 2.11 ------------------------------Exon 2.13 Exon 2.14 PDB: G:301-345 UniProt: 301-345 -------------------------Exon 2.16 ----------------------------Exon 2.18 PDB: G:413-444 -------------------------------------Exon 2.20 ----------------------------------- Transcript 2 (1)
Transcript 2 (2) ------------Exon 2.3a PDB: G:18-53 -------------------Exon 2.5 --------------------------------------------------Exon 2.8 PDB: G:134-171 ------------------------------------------------------------------------------Exon 2.12 PDB: G:250-280 (gaps----------------------------------------------------------------Exon 2.15 PDB: G:345-370 -------------Exon 2.17 PDB: G:384-413 ------------------------------Exon 2.19 PDB: G:444-482 ----------------Exon 2.21b PDB: G:499-534 Transcript 2 (2)
1r4m G 6 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY--------DHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 | - | 215 225 235 245 | - | 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495 505 515 525
199 208 253 259
Chain H from PDB Type:PROTEIN Length:418
aligned with UBA3_HUMAN | Q8TBC4 from UniProtKB/Swiss-Prot Length:463
Alignment length:430
42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462
UBA3_HUMAN 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFT 462
SCOP domains d1r4mh_ H: UBA3 SCOP domains
CATH domains 1r4mH01 H:12-209,H:289-339 NAD(P)-binding Rossmann-like Domain --1r4mH02 H:212-288 Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 1r4mH01 H:12-209,H:289-339 1r4mH03 H:340-602 ------ ---------- ------------------ CATH domains
Pfam domains (1) -----------------------------------ThiF-1r4mH01 H:47-192 --UBA_e1_thiolCys-1r4mH13 H:195-241 ------UBACT-1r4mH09 H:248-314 --------------------------------------E2_bind-1r4mH05 H:353-917 Pfam domains (1)
Pfam domains (2) -----------------------------------ThiF-1r4mH02 H:47-192 --UBA_e1_thiolCys-1r4mH14 H:195-241 ------UBACT-1r4mH10 H:248-314 --------------------------------------E2_bind-1r4mH06 H:353-917 Pfam domains (2)
Pfam domains (3) -----------------------------------ThiF-1r4mH03 H:47-192 --UBA_e1_thiolCys-1r4mH15 H:195-241 ------UBACT-1r4mH11 H:248-314 --------------------------------------E2_bind-1r4mH07 H:353-917 Pfam domains (3)
Pfam domains (4) -----------------------------------ThiF-1r4mH04 H:47-192 --UBA_e1_thiolCys-1r4mH16 H:195-241 ------UBACT-1r4mH12 H:248-314 --------------------------------------E2_bind-1r4mH08 H:353-917 Pfam domains (4)
Sec.struct. author .....hhhhhhhhhh.............hhhhhhhhhh.eeee...hhhhhhhhhhhh.....eeee.....hhhhh......hhhhh..hhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh.eee..eeehhhh..eeeeeee..eeeeeee..........hhhhh......hhhhhhh...hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee................ee...........hhhhhhhh.........ee..----........hhhhhhhh.-------..hhhhhh..-...ee...........ee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UBIQUITIN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 3 (1) Exon 3.3a PDB: H:12-40 Exon 3.4a PDB: H:41-67 Exon 3.5a PDB: H:68-95 --------------------------Exon 3.7a ---------------------Exon 3.9 PDB: H:159-210 UniProt: 180-231 Exon 3.10 PDB: H:211-245 -------------------------------------Exon 3.12 -----------Exon 3.14 PDB: H:313-340 Exon 3.15 PDB: H:341-374 ---------------------Exon 3.17 --------------------------- Transcript 3 (1)
Transcript 3 (2) -----------------------------------------------------------------------------------Exon 3.6 PDB: H:95-122 --------------Exon 3.8 --------------------------------------------------------------------------------------Exon 3.11a PDB: H:245-283 -----------------Exon 3.13 ------------------------------------------------------------Exon 3.16 ------------------Exon 3.18b UniProt: 435-463 Transcript 3 (2)
1r4m H 12 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITAT----NRTLYLQSVTSIEERTR-------KELGLVDGQE-AVADVTTPQTVLFKLHFT 917
21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 | 391 || 604 | - | 801| | 907 917
384 389 396| 608 700 706| | |
600 800 | |
802 |
900
Chain I from PDB Type:PROTEIN Length:76
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
10 20 30 40 50 60 70
NEDD8_HUMAN 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d1r4mi_ I: Nedd8 SCOP domains
CATH domains 1r4mI00 I:101-176 CATH domains
Pfam domains ---------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee......eeee.....hhhhhhhhhhhhhh.hhhhh.ee...........hhhhh.....eeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) UBIQUITIN_2 PDB: I:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) --------------------------UBIQUITIN_1 PDB: I:127-15------------------------ PROSITE (2)
Transcript 1 (1) 1.1a Exon 1.4 Exon 1.5a PDB: I:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------Exon 1.6e PDB: I:150-176 Transcript 1 (2)
1r4m I 101 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 176
110 120 130 140 150 160 170
Chain J from PDB Type:PROTEIN Length:76
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
10 20 30 40 50 60 70
NEDD8_HUMAN 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d1r4mj_ J: Nedd8 SCOP domains
CATH domains 1r4mJ00 J:101-176 CATH domains
Pfam domains ---------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee......eeee.....hhhhhhhhhhhhhh.hhhhh.ee...........hhhhh.....eeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) UBIQUITIN_2 PDB: J:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) --------------------------UBIQUITIN_1 PDB: J:127-15------------------------ PROSITE (2)
Transcript 1 (1) 1.1a Exon 1.4 Exon 1.5a PDB: J:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------Exon 1.6e PDB: J:150-176 Transcript 1 (2)
1r4m J 101 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 176
110 120 130 140 150 160 170
Chain K from PDB Type:PROTEIN Length:76
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
10 20 30 40 50 60 70
NEDD8_HUMAN 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d1r4mk_ K: Nedd8 SCOP domains
CATH domains 1r4mK00 K:101-176 CATH domains
Pfam domains ---------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee......eeee.....hhhhhhhhhhhhhh.hhhhh.eee..ee......hhhhh.....eeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) UBIQUITIN_2 PDB: K:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) --------------------------UBIQUITIN_1 PDB: K:127-15------------------------ PROSITE (2)
Transcript 1 (1) 1.1a Exon 1.4 Exon 1.5a PDB: K:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------Exon 1.6e PDB: K:150-176 Transcript 1 (2)
1r4m K 101 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 176
110 120 130 140 150 160 170
Chain L from PDB Type:PROTEIN Length:76
aligned with NEDD8_HUMAN | Q15843 from UniProtKB/Swiss-Prot Length:81
Alignment length:76
10 20 30 40 50 60 70
NEDD8_HUMAN 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
SCOP domains d1r4ml_ L: Nedd8 SCOP domains
CATH domains 1r4mL00 L:101-176 CATH domains
Pfam domains (1) -----ubiquitin-1r4mL01 L:106-174 -- Pfam domains (1)
Pfam domains (2) -----ubiquitin-1r4mL02 L:106-174 -- Pfam domains (2)
Pfam domains (3) -----ubiquitin-1r4mL03 L:106-174 -- Pfam domains (3)
Pfam domains (4) -----ubiquitin-1r4mL04 L:106-174 -- Pfam domains (4)
Sec.struct. author .eeeee......eeee.....hhhhhhhhhhhhhh.hhhhh.ee...........hhhhh.....eeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) UBIQUITIN_2 PDB: L:101-176 UniProt: 1-76 PROSITE (1)
PROSITE (2) --------------------------UBIQUITIN_1 PDB: L:127-15------------------------ PROSITE (2)
Transcript 1 (1) 1.1a Exon 1.4 Exon 1.5a PDB: L:123-150 -------------------------- Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------Exon 1.6e PDB: L:150-176 Transcript 1 (2)
1r4m L 101 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 176
110 120 130 140 150 160 170
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |