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(-) Description

Title :  CRYSTAL STRUCTURE OF TGCDPK1 FROM TOXOPLASMA GONDII COMPLEXED WITH 5GB
 
Authors :  D. Q. Jiang, W. Tempel, J. R. Walker, M. El Bakkouri, P. Loppnau, S. Gras C. H. Arrowsmith, A. M. Edwards, C. Bountra, R. Hui, D. V. Lovato, K. T. O Structural Genomics Consortium (Sgc)
Date :  01 Sep 16  (Deposition) - 02 Nov 16  (Release) - 02 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics Consortium, Sgc, Cdpks, Serine/Threonine Protein Kinase, Nucleotide-Binding, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Q. Jiang, W. Tempel, J. R. Walker, M. El Bakkouri, P. Loppnau, S. Graslund, C. H. Arrowsmith, A. M. Edwards, C. Bountra, R. Hui, D. V. Lovato, K. T. Osman
Crystal Structure Of Cdpk1 From Toxoplasma Gondii Complexed With Sgc-1-19
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CALMODULIN-DOMAIN PROTEIN KINASE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15_MHL
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CDPK1
    Organism Scientific: TOXOPLASMA GONDII
    Organism Taxid: 5811

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
15GB1Ligand/Ion4-(3-METHYLPHENYL)-5-(1,5-NAPHTHYRIDIN-2-YL)-1,3-THIAZOL-2-AMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:60 , SER A:61 , ALA A:78 , LYS A:80 , MET A:112 , LEU A:126 , GLU A:129 , TYR A:131 , ILE A:194binding site for residue 5GB A 1000

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5T6I)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5T6I)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5T6I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5T6I)

(-) Exons   (0, 0)

(no "Exon" information available for 5T6I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:427
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeee..eeeeeeee.....eeeeeeee......hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.......eee....hhhhh....hhhhhh......hhhhhhh....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhh..hhhhhhhhhhhhh.....eehhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5t6i A  44 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSDETKELTAIFKMDDGQLDRAELIEGYKELEHEVDQVLDAVDIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
                                    53        63        73        83||      95       105       115       125       135       145       155       165       175       185 ||    196       206       216       226       236       246       256       266       276       286       296       306     ||323       333       343       353|      364| ||   378       404       414||     430       440       450       460       470       480       490       500       
                                                                   84|                                                                                                 187|                                                                                                                        312|                              353|      364| ||            387|        415|                                                                                     
                                                                    87                                                                                                  189                                                                                                                         320                               355       366 ||             404         422                                                                                     
                                                                                                                                                                                                                                                                                                                                                  368|                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                   372
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5T6I)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5T6I)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5T6I)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9BJF5_TOXGO | Q9BJF5: 3hx4 3i79 3i7b 3i7c 3ku2 3ma6 3n51 3nyv 3sx9 3sxf 3t3u 3t3v 3upx 3upz 3v51 3v5p 3v5t 4ieb 4ifg 4ih8 4ihp 4jbv 4m84 4ona 4tzr 4wg3 4wg4 4wg5 4yga 4yjn 5dvr 5jms 5jn2 5t6a 5t6k

(-) Related Entries Specified in the PDB File

3ku2 THE SAME PROTEIN COMPLEXED WITH ANP
5dvr THE SAME PROTEIN COMPLEXED WITH GW780159X
5t6a
5t6k