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(-) Description

Title :  CRYSTAL STRUCTURE OF TGCDPK1 FROM TOXOPLASMA GONDII COMPLEXED WITH 5GA
 
Authors :  D. Q. Jiang, W. Tempel, P. Loppnau, J. R. Walker, S. Graslund, C. H. Arrow A. M. Edwards, C. Bountra, R. Hui, D. V. Lovato, K. T. Osman, Structural Consortium (Sgc)
Date :  01 Sep 16  (Deposition) - 02 Nov 16  (Release) - 02 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics Consortium, Sgc, Cdpks, Serine/Threonine Protein Kinase, Nucleotide-Binding, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Q. Jiang, W. Tempel, P. Loppnau, J. R. Walker, S. Graslund, C. H. Arrowsmith, A. M. Edwards, C. Bountra, R. Hui, D. V. Lovato, K. T. Osman, Structural Genomics Consortium (Sgc)
Crystal Structure Of Tgcdpk1 From Toxoplasma Gondii Complexed With Sgc-1-9
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CALMODULIN-DOMAIN PROTEIN KINASE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15_MHL
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CDPK1
    Organism Scientific: TOXOPLASMA GONDII
    Organism Taxid: 5811

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
15GA1Ligand/Ion4-(3-CHLORO-4-FLUOROPHENYL)-5-(1,5-NAPHTHYRIDIN-2-YL)-1,3-THIAZOL-2-AMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:60 , SER A:61 , VAL A:65 , ALA A:78 , LYS A:80 , MET A:112 , LEU A:114 , LEU A:126 , VAL A:127 , GLY A:128 , GLU A:129 , TYR A:131 , LEU A:181 , ILE A:194 , ASP A:195 , HOH A:746 , HOH A:793binding site for residue 5GA A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5T6A)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5T6A)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5T6A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5T6A)

(-) Exons   (0, 0)

(no "Exon" information available for 5T6A)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:431
                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhh...hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee........eee........................hhhhhhh...hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh..hhhhhhhhhhhhh.....eeehhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5t6a A  45 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDGDGQLRAELIEGYKELMVEHEVDQVLDAVDEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
                                    54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204|      215       225       235       245       255       265       275       285       295       305       322       332       342       352       362     ||374||     385  ||   409     ||426       436       446       456       466       476       486       496       506 
                                                                                                                                                                                         204|                                                                                                        313|                                            368| 375|        388|         415|                                                                                    
                                                                                                                                                                                          206                                                                                                         321                                             371  377         403          423
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5T6A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5T6A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5T6A)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9BJF5_TOXGO | Q9BJF5: 3hx4 3i79 3i7b 3i7c 3ku2 3ma6 3n51 3nyv 3sx9 3sxf 3t3u 3t3v 3upx 3upz 3v51 3v5p 3v5t 4ieb 4ifg 4ih8 4ihp 4jbv 4m84 4ona 4tzr 4wg3 4wg4 4wg5 4yga 4yjn 5dvr 5jms 5jn2 5t6i 5t6k

(-) Related Entries Specified in the PDB File

5t6i 5t6k