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(-) Description

Title :  CALCIUM-DEPENDENT PROTEIN KINASE 1 FROM TOXOPLASMA GONDII (TGCDPK1) IN COMPLEX WITH INHIBITOR UW1639
 
Authors :  E. A. Merritt
Date :  03 Mar 15  (Deposition) - 25 Nov 15  (Release) - 06 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Serine/Threonine Protein Kinase, Transferase, Calcium-Binding, Atp- Binding, Bumped Kinase Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Huang, K. K. Ojo, Z. Zhang, K. Rivas, R. S. Vidadala, S. Scheele, A. E. Derocher, R. Choi, M. A. Hulverson, L. K. Barrett, I. Bruzual, L. K. Siddaramaiah, K. M. Kerchner, M. D. Kurnick, G. M. Freiberg, D. Kempf, W. G. Hol, E. A. Merritt, G. Neckermann, E. L. De Hostos, N. Isoherranen, D. J. Maly, M. Parsons, J. S. Doggett, W. C. Van Voorhis, E. Fan
Sar Studies Of 5-Aminopyrazole-4-Carboxamide Analogues As Potent And Selective Inhibitors Of Toxoplasma Gondii Cdpk1.
Acs Med. Chem. Lett. V. 6 1184 2015
PubMed-ID: 26693272  |  Reference-DOI: 10.1021/ACSMEDCHEMLETT.5B00319
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CALMODULIN-DOMAIN PROTEIN KINASE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 30-507
    Gene: CDPK1
    Organism Scientific: TOXOPLASMA GONDII
    Organism Taxid: 5811

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1UW41Ligand/Ion5-AMINO-1-TERT-BUTYL-3-[2-(CYCLOBUTYLOXY)QUINOLIN-6-YL]-1H-PYRAZOLE-4-CARBOXAMIDE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:57 , GLY A:58 , VAL A:65 , ALA A:78 , MET A:112 , LEU A:114 , LEU A:126 , GLU A:129 , VAL A:130 , TYR A:131 , ASP A:195 , PHE A:196 , LEU A:198 , HOH A:727binding site for residue UW4 A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YJN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4YJN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4YJN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YJN)

(-) Exons   (0, 0)

(no "Exon" information available for 4YJN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:460
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhheeeeeeeeee..eeeeeeee.....eeeeeeee........hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee........eee...hhhhhh....hhhhhh......hhhhhhh....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.......eehhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhh..hhhhhhhhhhhhh.....eeehhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4yjn A  43 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312 ||    327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507
                                                                                                                                                                                                                                                                                                         314|                                                                                                                                                                                           
                                                                                                                                                                                                                                                                                                          320
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YJN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YJN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YJN)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9BJF5_TOXGO | Q9BJF5: 3hx4 3i79 3i7b 3i7c 3ku2 3ma6 3n51 3nyv 3sx9 3sxf 3t3u 3t3v 3upx 3upz 3v51 3v5p 3v5t 4ieb 4ifg 4ih8 4ihp 4jbv 4m84 4ona 4tzr 4wg3 4wg4 4wg5 4yga 5dvr 5jms 5jn2 5t6a 5t6i 5t6k

(-) Related Entries Specified in the PDB File

4ona