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(-) Description

Title :  APO STRUCTURE OF FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM ESCHERICHIA COLI AT 1.9 ANGSTROM RESOLUTION
 
Authors :  T. H. Tran, K. H. Huynh, T. H. Ho, L. W. Kang
Date :  03 Jul 16  (Deposition) - 05 Jul 17  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Fba Apo3, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. H. Tran, K. H. Huynh, T. H. Ho, L. W. Kang
Apo Structure Of Fructose 1, 6-Bisphosphate Aldolase From Escherichia Coli At 1. 9 Angstrom Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2
    Chains: A, B, C, D, E, F, G, H
    EC Number: 4.1.2.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: FBAA, FBA, FDA, B2925, JW2892
    Organism Scientific: ESCHERICHIA COLI (STRAIN K12)
    Organism Taxid: 83333
    Strain: K12
    Synonym: FBPA,FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE,FRUCTOSE- BISPHOSPHATE ALDOLASE CLASS II

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 27)

Asymmetric Unit (3, 27)
No.NameCountTypeFull Name
1GOL7Ligand/IonGLYCEROL
2PEG6Ligand/IonDI(HYDROXYETHYL)ETHER
3ZN14Ligand/IonZINC ION
Biological Unit 1 (2, 3)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
3ZN-1Ligand/IonZINC ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
3ZN-1Ligand/IonZINC ION
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
3ZN-1Ligand/IonZINC ION
Biological Unit 4 (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
3ZN-1Ligand/IonZINC ION

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLN A:18 , TYR A:206 , PRO A:214 , SER A:258 , ASN A:260 , HOH A:510 , HOH A:532 , HOH A:560binding site for residue GOL A 401
02AC2SOFTWAREHIS A:110 , GLU A:174 , HIS A:226 , HIS A:264 , HOH A:573binding site for residue ZN A 402
03AC3SOFTWAREHIS A:110 , HIS A:226 , HIS A:264 , HOH A:576 , HOH A:617 , HOH A:631binding site for residue ZN A 403
04AC4SOFTWAREPRO B:214 , SER B:258 , LEU B:259 , ASN B:260 , HOH B:528 , HOH B:550 , HOH B:593 , HOH G:564binding site for residue GOL B 401
05AC5SOFTWARESER A:88 , HIS A:91 , HIS A:92 , GLN A:95 , SER B:88 , HIS B:91 , HIS B:92 , GLN B:95 , HOH B:553binding site for residue PEG B 402
06AC6SOFTWAREHIS B:110 , GLU B:174 , HIS B:226 , HIS B:264 , HOH B:578binding site for residue ZN B 403
07AC7SOFTWAREGLN C:18 , TYR C:206 , PRO C:214 , SER C:258 , LEU C:259 , ASN C:260 , HOH C:1204 , HOH C:1225 , HOH C:1262binding site for residue GOL C 401
08AC8SOFTWAREVAL C:37 , GLY C:38 , THR C:39 , ASP C:40 , HOH C:1201 , HOH C:1207 , HOH C:1209 , VAL D:37 , GLY D:38 , THR D:39 , ASP D:40 , HOH D:524 , HOH D:541binding site for residue PEG C 402
09AC9SOFTWAREHIS C:110 , GLU C:174 , HIS C:226 , HIS C:264 , HOH C:1223binding site for residue ZN C 403
10AD1SOFTWAREHIS C:110 , HIS C:226 , HIS C:264 , HOH C:1227 , HOH C:1308 , HOH C:1322binding site for residue ZN C 404
11AD2SOFTWAREGLN D:18 , PRO D:214 , SER D:258 , LEU D:259 , HOH D:508 , HOH D:516 , HOH D:585 , HOH D:606binding site for residue GOL D 401
12AD3SOFTWARESER C:88 , HIS C:91 , HIS C:92 , GLN C:95 , SER D:88 , HIS D:91 , HIS D:92binding site for residue PEG D 402
13AD4SOFTWAREHIS D:110 , GLU D:174 , HIS D:226 , HIS D:264 , HOH D:572binding site for residue ZN D 403
14AD5SOFTWAREHIS D:110 , HIS D:226 , HIS D:264 , HOH D:556 , HOH D:636 , HOH D:644binding site for residue ZN D 404
15AD6SOFTWAREGLN E:18 , PRO E:214 , PHE E:216 , SER E:258 , LEU E:259 , ASN E:260 , HOH E:531 , HOH E:548 , HOH E:575binding site for residue GOL E 401
16AD7SOFTWARESER E:88 , HIS E:91 , HIS E:92 , GLN E:95 , HOH E:585 , SER F:88 , HIS F:91 , HIS F:92binding site for residue PEG E 402
17AD8SOFTWAREHIS E:110 , GLU E:174 , HIS E:226 , HIS E:264 , HOH E:559binding site for residue ZN E 403
18AD9SOFTWAREHIS E:110 , HIS E:226 , HIS E:264 , HOH E:535 , HOH E:619 , HOH E:626binding site for residue ZN E 404
19AE1SOFTWAREHIS F:110 , GLU F:174 , HIS F:226 , HIS F:264 , HOH F:573binding site for residue ZN F 401
20AE2SOFTWAREGLN G:18 , PRO G:214 , SER G:258 , LEU G:259 , ASN G:260 , HOH G:509 , HOH G:557binding site for residue GOL G 401
21AE3SOFTWAREVAL G:37 , GLY G:38 , THR G:39 , ASP G:40 , LEU G:334 , HOH G:511 , HOH G:515 , VAL H:37 , GLY H:38 , THR H:39 , ASP H:40 , LEU H:334 , HOH H:510 , HOH H:518 , HOH H:525binding site for residue PEG G 402
22AE4SOFTWARESER G:88 , HIS G:91 , HIS G:92 , GLN G:95 , HOH G:596 , SER H:88 , HIS H:91 , HIS H:92binding site for residue PEG G 403
23AE5SOFTWAREHIS G:110 , GLU G:174 , HIS G:226 , HIS G:264 , HOH G:573binding site for residue ZN G 404
24AE6SOFTWAREHIS G:110 , HIS G:226 , HIS G:264 , HOH G:538 , HOH G:606 , HOH G:624binding site for residue ZN G 405
25AE7SOFTWAREPRO H:214 , SER H:258 , ASN H:260 , HOH H:537 , HOH H:548 , HOH H:583 , HOH H:597binding site for residue GOL H 401
26AE8SOFTWAREHIS H:110 , GLU H:174 , HIS H:226 , HIS H:264 , HOH H:516binding site for residue ZN H 402
27AE9SOFTWAREHIS H:110 , HIS H:226 , HIS H:264 , HOH H:531 , HOH H:627 , HOH H:631binding site for residue ZN H 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5GK5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5GK5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5GK5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5GK5)

(-) Exons   (0, 0)

(no "Exon" information available for 5GK5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:332
                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhh....eeee...........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 A   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGYTQPEDVDYAYTELSKISPRFTIAASFGNVHVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     ||199       209       219      |236       246       256       266       276       286       296       306       316       326       336       346       356  
                                                                                                                                                                                                         176|                           226|                                                                                                                            
                                                                                                                                                                                                          196                            234                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:331
                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhhhhhhhh....eeeee.........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 B   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGYTQPEDVDYAYTELSKISPRFTIAASFGNVHVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     ||199       209       219      |237       247       257       267       277       287       297       307       317       327       337       347       357 
                                                                                                                                                                                                         176|                           226|                                                                                                                           
                                                                                                                                                                                                          196                            235                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:335
                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhh....eeee...........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 C   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTLYTQPEDVDYAYTELSKISPRFTIAASFGNVHVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       196       206       216       226|      243       253       263       273       283       293       303       313       323       333       343       353     
                                                                                                                                                                                                           178|                            226|                                                                                                                            
                                                                                                                                                                                                            195                             234                                                                                                                            


Chain D from PDB  Type:PROTEIN  Length:331
                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhh....eeee..........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 D   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGYTQPEDVDYAYTELSKISPRFTIAASFGNVHVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     ||199       209       219      |237       247       257       267       277       287       297       307       317       327       337       347       357 
                                                                                                                                                                                                         176|                           226|                                                                                                                           
                                                                                                                                                                                                          196                            235                                                                                                                           


Chain E from PDB  Type:PROTEIN  Length:334
                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhh....eeee..........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 E   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTLYTQPEDVDYAYTELSKISPRFTIAASFGNVHVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       196       206       216       226|      244       254       264       274       284       294       304       314       324       334       344       354    
                                                                                                                                                                                                           178|                            226|                                                                                                                           
                                                                                                                                                                                                            195                             235                                                                                                                           


Chain F from PDB  Type:PROTEIN  Length:332
                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhh....eeeee.........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 F   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCYTQPEDVDYAYTELSKISPRFTIAASFGNVHVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170      |198       208       218       236       246       256       266       276       286       296       306       316       326       336       346       356  
                                                                                                                                                                                                          177|                           226|                                                                                                                           
                                                                                                                                                                                                           196                            235                                                                                                                           


Chain G from PDB  Type:PROTEIN  Length:335
                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhh....eeee...........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 G   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTLYTQPEDVDYAYTELSKISPRFTIAASFGNVHVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       196       206       216       226|      243       253       263       273       283       293       303       313       323       333       343       353     
                                                                                                                                                                                                           178|                            226|                                                                                                                            
                                                                                                                                                                                                            195                             234                                                                                                                            


Chain H from PDB  Type:PROTEIN  Length:331
                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh...ee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeeehhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhhhhhhhh....eeeee.........hhhhhhhhhhhhhhhh.......eee......hhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhhhhhhh...eee..eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5gk5 H   1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGYTQPEDVDYAYTELSKISPRFTIAASFGNVHVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     ||199       209       219      |237       247       257       267       277       287       297       307       317       327       337       347       357 
                                                                                                                                                                                                         176|                           226|                                                                                                                           
                                                                                                                                                                                                          196                            235
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5GK5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5GK5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5GK5)

(-) Gene Ontology  (13, 13)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

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        ALF_ECOLI | P0AB71: 1b57 1dos 1gyn 1zen 5gk3 5gk4 5gk6 5gk7 5gk8

(-) Related Entries Specified in the PDB File

5gk3 5gk4 5gk6 5gk7 5gk8