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(-) Description

Title :  GLUN1B-GLUN2B NMDA RECEPTOR IN NON-ACTIVE-1 CONFORMATION
 
Authors :  N. Tajima, E. Karakas, T. Grant, N. Simorowski, R. Diaz-Avalos, N. Grig H. Furukawa
Date :  02 Mar 16  (Deposition) - 11 May 16  (Release) - 19 Apr 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  6.10
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Transport Protein, Signaling Protein, Nmda Receptor, Glutamate Receptor, Glun1, Glun2B, Ion Channel (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Tajima, E. Karakas, T. Grant, N. Simorowski, R. Diaz-Avalos, N. Grigorieff, H. Furukawa
Activation Of Nmda Receptors And The Mechanism Of Inhibitio By Ifenprodil.
Nature V. 534 63 2016
PubMed-ID: 27135925  |  Reference-DOI: 10.1038/NATURE17679

(-) Compounds

Molecule 1 - N-METHYL-D-ASPARTATE RECEPTOR GLUN1
    Chains: A, C
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: MODIFIED PFL AND PUCDM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 23-868
    Mutation: YES
    Organism Common: NORWAY RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: GLUN1, GLUTAMATE NMDA RECEPTOR SUBUNIT ZETA-1, N-METHYL-D- ASPARTATE RECEPTOR SUBUNIT NR1, NMD-R1, N-METHYL-D-ASPARTATE RECEPTOR GLUN1
 
Molecule 2 - N-METHYL-D-ASPARTATE RECEPTOR GLUN2B
    Chains: B, D
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: MODIFIED PFL AND PUCDM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 27-852
    Mutation: YES
    Organism Common: NORWAY RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: GLUN1, GLUTAMATE NMDA RECEPTOR SUBUNIT ZETA-1, N-METHYL-D- ASPARTATE RECEPTOR SUBUNIT NR1, NMD-R1, N-METHYL-D-ASPARTATE RECEPTOR GLUN1

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5FXH)

(-) Sites  (0, 0)

(no "Site" information available for 5FXH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FXH)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ala B:414 -Pro B:415
2Ala D:414 -Pro D:415

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FXH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FXH)

(-) Exons   (0, 0)

(no "Exon" information available for 5FXH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:783
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee.hhhhhhhhhhhhhhhhhh..eee..ee...hhhhhhhhhhhhhhhhh...eee.......hhhhhhhhhh...eee......................hhhhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhh...eeeee.hhhhhhhhhhhhh.........eee.hhhhhhhhhhh........eee....hhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh.eeee..eee............eeeeee....eeeeeee....eee......................eeeeee...............................eeeee....eeeee.hhhhhhhhhhhhhh..eeeeee.........ee......ee.hhhhhhhhh......ee....hhhhhhhh......eeeeeeeeee.................hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhh......eee...hhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhhh....eeeeehhhhhhhhhhh..ee.....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fxh A  25 KIVNIGAVLSTRKHEQMFREAVNQANKRIQLQATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKSGPKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLDMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFAQYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTVPQCCYGFCIDLLIKLARTMQFTYEVHLVADGKFGTQERVQNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSLTLSSAMWFSWGVLLNSGISFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQQVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTCENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDA 864
                                    34        44       |59        69        79        89     ||104       114       124       134       144       154       164       174       184      |211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461||     479       489       499       509       519       529       539       549       559       569       579       589       599     ||625       635    || 651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841       851       861   
                                                      52|                                   95|                                                                                       191|                                                                                                                                                                                                                                                          462|                                                                                                                                   605|               640|                                                                                                                                                                                                                         
                                                       58                                   101                                                                                        209                                                                                                                                                                                                                                                           471                                                                                                                                    622                647                                                                                                                                                                                                                         


Chain B from PDB  Type:PROTEIN  Length:763
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhh.......eeeeeeeee...hhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhh..eee.hhhhhh...........ee...hhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhh......eeeeee.....hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhh......eeeeehhhhh.............eeee......hhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh.hhhhhhhhh.....................eeeee.....eeeeeeee..eeee...............ee.......eee.......................eeehhhhhhhhhhhhhhh.....ee...............hhhhhhhh............hhhhhhhh......eee.eeeeee.........hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........................ee....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh...eeeeehhhhhhhhhh.....ee..........eee.........hhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fxh B  32 PPSIGIAVILVGTSDEVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNTHEKRIYQSNMLNRYLINVTFEGRDLSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQMKYYVWPRMEDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNSPSAFLACVWVMMFVMLLIVSAVAVFVFEFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFISEHL 841
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391  ||   408       418       428       438||     460       470       480       490       500       510       520       530       540 ||    557       567       577||     608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768       778       788       798       808       818       828       838   
                                                                                                                                                                                                                                                                                                                                                                                                    394|                                  439|                                                                                       542|  551|                   578|                                                                                                                                                                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                     402                                   452                                                                                        546   556                    600                                                                                                                                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:777
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee.hhhhhhhhhhhhhhhhhh..eee..ee...hhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhh...eee......................hhhhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhh...eeeee.hhhhhhhhhhhhh.........eee.hhhhhhhhhhh........eee....hhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh.eeee..eee............eeeeee....eeeeeee....eee......................eeeeee...............................eeeee....eeeee.hhhhhhhhhhhhhh..eeeeee.........ee......ee.hhhhhhhhh......ee....hhhhhhhh......eeeeeeeeee.................hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhh......eee...hhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhhh....eeeeehhhhhhhhhhh..ee.....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fxh C  25 KIVNIGAVLSTRKHEQMFREAVNQANKRIQLQATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKSKGPKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLDMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFAQYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTVPQCCYGFCIDLLIKLARTMQFTYEVHLVADGKFGTQERVQNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRLTLSSAMWFSWGVLLNSGSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQQVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTCENMAGVFMLVAGGIVAGIFLIFIEIAYKRHK 862
                                    34        44       |59        69        79        89     ||106       116       126       136       146       156       166       176       186     ||212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462|      480       490       500       510       520       530       540       550       560       570       580       590       600  ||   628       638||     655       665       675       685       695       705       715       725       735       745       755       765       775       785       795       805       815       825       835       845       855       
                                                      52|                                   95|                                                                                      192|                                                                                                                                                                                                                                                          462|                                                                                                                                 603|              639|                                                                                                                                                                                                                       
                                                       58                                   103                                                                                       209                                                                                                                                                                                                                                                           471                                                                                                                                  622               647                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhh.......eeeeeeeee...hhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhh..eee.hhhhhh...........ee...hhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhh......eeeeee.....hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhh......eeeeehhhhh.............eeee......hhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhh.....................eeeee.....eeeeeeee..eeee...............ee.......eee.......................eeehhhhhhhhhhhhhhh.....ee...............hhhhhhhh............hhhhhhhh......eee.eeeeee........hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........................ee....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh...eeeeehhhhhhhhhh.....ee..........eee.........hhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fxh D  32 PPSIGIAVILVGTSDEVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNTHESNMLNRYLINVTFEGRDLSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQMKYYVWPRMEDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSSPSAFLACVWVMMFVMLLIVSAVAVFVFEFTIGKAIWLLWGLVFNNSVNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFISEHL 841
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321    || 336       346       356       366       376       386       403       413       423       433     ||455       465       475       485       495       505       515       525       535     ||549 ||    563       573    || 604       614   ||  627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       817       827       837    
                                                                                                                                                                                                                                                                                                                                326|                                                           394|                                  439|                                                                                      541|  551|                   578|               618|                                                                                                                                                                                                                           
                                                                                                                                                                                                                                                                                                                                 332                                                            402                                   452                                                                                       546   556                    600                622
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FXH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FXH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FXH)

(-) Gene Ontology  (87, 119)

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  Cis Peptide Bonds
    Ala B:414 - Pro B:415   [ RasMol ]  
    Ala D:414 - Pro D:415   [ RasMol ]  
 

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  5fxh
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  NMDZ1_RAT | P35439
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NMDE2_RAT | Q00960: 3jpw 3jpy 3qel 3qem 4pe5 5b3j 5fxg 5fxi 5fxj 5fxk 5tpz
        NMDZ1_RAT | P35439: 1pb7 1pb8 1pb9 1pbq 1y1m 1y1z 1y20 2a5t 3q41 4kcc 4kfq 4nf4 4nf5 4nf6 4nf8 4pe5 5ddn 5ddx 5de4 5dex 5fxg 5fxi 5fxj 5fxk 5i56 5i57 5i58 5i59 5jty 5u8c 5vih 5vii 5vij

(-) Related Entries Specified in the PDB File

5fxg GLUN1B-GLUN2B NMDA RECEPTOR IN ACTIVE CONFORMATION
5fxi GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE IN NON-ACTIVE-2 CONFORMATION
5fxj GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE-CLASS X
5fxk GLUN1B-GLUN2B NMDA RECEPTOR STRUCTURE-CLASS Y RELATED ID: EMD-3353 RELATED DB: EMDB ACTIVATION OF NMDA RECEPTORS AND THE MECHANISM OF INHIBITION BY IFENPRODIL - NON-ACTIVE 1 CONFORMATION