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(-) Description

Title :  GLUTATHIONE S-TRANSFERASE BOUND WITH HYDROLYZED PIPERLONGUMINE
 
Authors :  W. Harshbarger, S. Gondi, S. Ficarro, J. Hunter, D. Udayakumar, D. Gurb J. Marto, K. Westover
Date :  31 Mar 16  (Deposition) - 30 Nov 16  (Release) - 18 Jan 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.19
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Keywords :  Gstp1, Piperlongumine, Glutathione, Transferase, Transferase- Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Harshbarger, S. Gondi, S. B. Ficarro, J. Hunter, D. Udayakumar, D. Gurbani, W. D. Singer, Y. Liu, L. Li, J. A. Marto, K. D. Westover
Structural And Biochemical Analyses Reveal The Mechanism Of Glutathione S-Transferase Pi 1 Inhibition By The Anti-Cance Compound Piperlongumine.
J. Biol. Chem. V. 292 112 2017
PubMed-ID: 27872191  |  Reference-DOI: 10.1074/JBC.M116.750299

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE P
    Chains: A, B
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: GSTP1, FAEES3, GST3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: GST CLASS-PI,GSTP1-1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric Unit (3, 6)
No.NameCountTypeFull Name
13LF2Ligand/Ion3-(3,4,5-TRIMETHOXYPHENYL)PROPANOIC ACID
2GSH2Ligand/IonGLUTATHIONE
3MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
Biological Unit 1 (3, 6)
No.NameCountTypeFull Name
13LF2Ligand/Ion3-(3,4,5-TRIMETHOXYPHENYL)PROPANOIC ACID
2GSH2Ligand/IonGLUTATHIONE
3MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:22 , TRP A:28 , GLU A:30 , GLU A:197 , HOH A:405 , HOH A:406 , HOH A:414 , HOH A:438 , HOH A:574binding site for residue MES A 303
2AC2SOFTWAREHOH A:647 , ALA B:22 , TRP B:28 , GLU B:30 , GLU B:197 , HOH B:403 , HOH B:446 , HOH B:455 , HOH B:467binding site for residue MES B 303
3AC3SOFTWARETYR A:7 , PHE A:8 , VAL A:10 , GLY A:12 , ARG A:13 , TRP A:38 , LYS A:44 , GLN A:51 , LEU A:52 , PRO A:53 , GLN A:64 , SER A:65 , ILE A:104 , TYR A:108 , HOH A:418 , HOH A:419 , HOH A:436 , HOH A:447 , HOH A:475 , HOH A:488 , HOH A:507 , HOH A:604 , ASP B:98binding site for residues 3LF A 301 and GSH A 302
4AC4SOFTWAREASP A:98 , TYR B:7 , PHE B:8 , VAL B:10 , GLY B:12 , ARG B:13 , TRP B:38 , LYS B:44 , GLN B:51 , LEU B:52 , PRO B:53 , GLN B:64 , SER B:65 , ILE B:104 , TYR B:108 , HOH B:411 , HOH B:413 , HOH B:422 , HOH B:460 , HOH B:492 , HOH B:578binding site for residues 3LF B 301 and GSH B 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5J41)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Leu A:52 -Pro A:53
2Leu B:52 -Pro B:53

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5J41)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5J41)

(-) Exons   (0, 0)

(no "Exon" information available for 5J41)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5j41 A   1 PPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         


Chain B from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5j41 B   2 PYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5J41)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5J41)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5J41)

(-) Gene Ontology  (63, 63)

Asymmetric Unit(hide GO term definitions)

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  5j41
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  GSTP1_HUMAN | P09211
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GSTP1_HUMAN | P09211: 10gs 11gs 12gs 13gs 14gs 16gs 17gs 18gs 19gs 1aqv 1aqw 1aqx 1eog 1eoh 1gss 1kbn 1lbk 1md3 1md4 1pgt 1px6 1px7 1zgn 20gs 22gs 2a2r 2a2s 2gss 2j9h 2pgt 3csh 3csi 3csj 3dd3 3dgq 3gss 3gus 3hjm 3hjo 3hkr 3ie3 3km6 3kmn 3kmo 3n9j 3pgt 4gss 4pgt 5dak 5dal 5dcg 5ddl 5djl 5djm 5gss 5jcw 5l6x 6gss 7gss 8gss 9gss

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