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Title :   HUMAN GLUTATHIONE S-TRANSFERASE P1-1 Y108F MUTANT

Authors :   A. Oakley, J. Rossjohn, M. Parker

Date :   20 Jan 97 (Deposition) - 28 Jan 98 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym./Biol. Unit : A,B

Keywords :   Transferase, Multigene Family (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Lo Bello, A. J. Oakley, A. Battistoni, A. P. Mazzetti, M. Nuccetelli, G. Mazzarese, J. Rossjohn, M. W. Parker, G. Ricci
Multifunctional Role Of Tyr 108 In The Catalytic Mechanism Of Human Glutathione Transferase P1-1. Crystallographic And Kinetic Studies On The Y108F Mutant Enzyme.
Biochemistry V. 36 6207 1997
PubMed-ID: 9166793 | Reference-DOI: 10.1021/BI962813Z
(for further references see the PDB file header)

Molecule 1 - GLUTATHIONE S-TRANSFERASE
	Chains	:	A, B
	EC Number	:	2.5.1.18
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	GTP_HUMAN
	Mutation	:	YES
	Organ	:	PLACENTA
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (2, 4)

No.	Name	Count	Type	Full Name
1	GTX	2	Ligand/Ion	S-HEXYLGLUTATHIONE
2	MES	2	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:7 , PHE A:8 , ARG A:13 , TRP A:38 , LYS A:44 , GLN A:51 , LEU A:52 , PRO A:53 , GLN A:64 , SER A:65 , GLY A:205 , HOH A:221 , HOH A:227 , HOH A:264 , HOH A:293 , HOH A:304 , ASP B:98	BINDING SITE FOR RESIDUE GTX A 210
2	AC2	SOFTWARE	TRP A:28 , GLU A:30 , GLU A:197 , ASP B:171	BINDING SITE FOR RESIDUE MES A 211
3	AC3	SOFTWARE	ASP A:98 , TYR B:7 , PHE B:8 , ARG B:13 , TRP B:38 , LYS B:44 , GLN B:51 , LEU B:52 , PRO B:53 , GLN B:64 , SER B:65 , GLY B:205 , HOH B:223 , HOH B:225 , HOH B:231 , HOH B:235 , HOH B:245	BINDING SITE FOR RESIDUE GTX B 210
4	AC4	SOFTWARE	TRP B:28 , GLU B:30 , GLU B:197	BINDING SITE FOR RESIDUE MES B 211

(no "SS Bond" information available for 4GSS)

Asymmetric/Biological Unit

No.	Residues
1	Leu A:52	-	Pro A:53
2	Leu B:52	-	Pro B:53

(no "SAP(SNP)/Variant" information available for 4GSS)

(no "PROSITE Motif" information available for 4GSS)

(no "Exon" information available for 4GSS)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains d4gssa2 A:2-76 Class pi GST                                                d4gssa1 A:77-209 Class pi GST                                                                                                         SCOP domains
               CATH domains 4gssA01 A:2-78,A:187-208 Glutaredoxin                                        4gssA02 A:79-186  [code=1.20.1050.10, no name defined]                                                      4gssA01 Glutaredoxin  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhh....eeeeee.hhhhhh.hhhhh.......eeee..eeee.hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhh..hhhhhhhh.hhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gss A   2 PYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIFTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201

Chain B from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains d4gssb2 B:2-76 Class pi GST                                                d4gssb1 B:77-209 Class pi GST                                                                                                         SCOP domains
               CATH domains 4gssB01 B:2-78,B:187-208 Glutaredoxin                                        4gssB02 B:79-186  [code=1.20.1050.10, no name defined]                                                      4gssB01 Glutaredoxin  - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee...hhhhhhhhhhhh....eeeeee.hhhhhh.hhhhh.......eeee..eeee.hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhh..........hhhhhhhhhhhhhhhh........hhhhhhhhhhh..hhhhhhhh.hhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gss B   2 PYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIFTNYEAGKDDYVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGNGKQ 209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: GST C-terminal domain-like (353)

Superfamily: GST C-terminal domain-like (353)

Family: Glutathione S-transferase (GST), C-terminal domain (263)

Protein domain: Class pi GST (65)

Human (Homo sapiens) [TaxId: 9606] (52)

1a	d4gssa1	A:77-209
1b	d4gssb1	B:77-209

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thioredoxin fold (994)

Superfamily: Thioredoxin-like (992)

Family: Glutathione S-transferase (GST), N-terminal domain (216)

Protein domain: Class pi GST (61)

Human (Homo sapiens) [TaxId: 9606] (49)

2a	d4gssa2	A:2-76
2b	d4gssb2	B:2-76

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Human (Homo sapiens) (186)

1a	4gssA01	A:2-78,A:187-208
1b	4gssB01	B:2-78,B:187-208

Class: Mainly Alpha (13335)

Architecture: Up-down Bundle (3216)

Topology: Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 (267)

Homologous Superfamily: [code=1.20.1050.10, no name defined] (249)

Human (Homo sapiens) (119)

2a	4gssA02	A:79-186
2b	4gssB02	B:79-186

(no "Pfam Domain" information available for 4GSS)

Asymmetric/Biological Unit(hide GO term definitions)

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Leu A:52 - Pro A:53	[ RasMol ]
		Leu B:52 - Pro B:53	[ RasMol ]

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Description

Compounds

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Ligands, Modified Residues, Ions (2, 4)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

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